Contig 012047:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF029A09+                                                                    GA
rJMSF028A09+                                                                    GA
JMSF029A09-                                                                     GA
JMSF028A09-                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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rJMSF029A09+          GGGATGCCCAACTTCCAAATTTTGTTCCATGCAGAAAAACTGTTATTATGATGCACAAAT
rJMSF028A09+          GGGATGCCCAACTTCCAAATTTTGTTCCATGCAGAAAAACTGTTATTATGATGCACAAAT
JMSF029A09-           GGGATGCCCAACTTCCAAATTTTGTTCCATGCAGAAAAACTGTTATTATGATGCACAAAT
JMSF028A09-           GGGATGCCCAACTTCCAAATTTTGTTCCATGCAGAAAAACTGTTATTATGATGCACAAAT
                      ____________________________________________________________
consensus             GGGATGCCCAACTTCCAAATTTTGTTCCATGCAGAAAAACTGTTATTATGATGCACAAAT
 
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rJMSF029A09+          ATAAAATCACCCATCAAAGATCTATACCCAGAGCGCACAGTATAATTACCCCTTACATCC
rJMSF028A09+          ATAAAATCACCCATCAAAGATCTATACCCAGAGCGCACAGTATAATTACCCCTTACATCC
JMSF029A09-           ATAAAATCACCCATCAAAGATCTATACCCAGAGCGCACAGTATAATTACCCCTTACATCC
JMSF028A09-           ATAAAATCACCCATCAAAGATCTATACCCAGAGCGCACAGTATAATTACCCCTTACATCC
                      ____________________________________________________________
consensus             ATAAAATCACCCATCAAAGATCTATACCCAGAGCGCACAGTATAATTACCCCTTACATCC
 
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rJMSF029A09+          CCATACCAATNCAACAAACTTCATAGTGTAAATTAATAGGAGTCTTATTATTATTATTAG
rJMSF028A09+          CCATACCAATACAACAAACTTCATAGTGTAAATTAATAGGAGTCTTATTATTATTATTAG
JMSF029A09-           CCATACCAATACAACAAACTTCATAGTGTAAATTAATAGGAGTCTTATTATTATTATTAG
JMSF028A09-           CCATACCAATACAACAAACTTCATAGTGTAAATTAATAGGAGTCTTATTATTATTATTAG
                      ____________________________________________________________
consensus             CCATACCAATACAACAAACTTCATAGTGTAAATTAATAGGAGTCTTATTATTATTATTAG
 
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rJMSF029A09+          AGTTTAATATCAATTTAGAGTTTTTTTACTGACTAGGCAGGAAAATTTCATAGTGACTGC
rJMSF028A09+          AGTTTAATATCAATTTAGAGTTTTTTTACTGACTAGGCAGGAAAATTTCATAGTGACTGC
JMSF029A09-           AGTTTAATATCAATTTAGAGTTTTTTTACTGACTAGGCAGGAAAATTTCATAGTGACTGC
JMSF028A09-           AGTTTAATATCAATTTAGAGTTTTTTTACTGACTAGGCAGGAAAATTTCATAGTGACTGC
                      ____________________________________________________________
consensus             AGTTTAATATCAATTTAGAGTTTTTTTACTGACTAGGCAGGAAAATTTCATAGTGACTGC
 
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rJMSF029A09+          CCAAAGGTAAAATCTATACTGAGTAATCTTTACCTATCTTGTGATCCCTTAACCAATCTA
rJMSF028A09+          CCAAAGGTAAAATCTATACTGAGTAATCTTTACCTATCTTGTGATCCCTTAACCAATCTA
JMSF029A09-           CCNAAGGTAAAATCTATACTGAGTAATCTTTACCTATCTTGTGATCCCTTAACCAATCTA
JMSF028A09-           CCAAAGGTAAAATCTATACTGAGTAATCTTTACCTATCTTGTGATCCCTTAACCAATCTA
                      ____________________________________________________________
consensus             CCAAAGGTAAAATCTATACTGAGTAATCTTTACCTATCTTGTGATCCCTTAACCAATCTA
 
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rJMSF029A09+          GAT                                                         
rJMSF028A09+          GAT                                                         
JMSF029A09-           GATTACCTAGAGTTGAGTAGTTCAAAGTCTCAAACTAAGCAAATCAATACAAAAAAAAAA
JMSF028A09-           GATTACCTAGAGTTGAGTAGTTCAAAGTCTCAAACTAAGCAAATCAATACAAAAAAAAAA
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consensus             GATTACCTAGAGTTGAGTAGTTCAAAGTCTCAAACTAAGCAAATCAATACAAAAAAAAAA