Contig 012043:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I07+                                               TCACCACGGGCTTTGGGTACAAAC
                      ____________________________________________________________
consensus                                                 TCACCACGGGCTTTGGGTACAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I07+           TGTCAGTGATATTCTTCATAGCTTCAAGCTGTGAAACCTCCGGCCCCAAAAACACAACCA
                      ____________________________________________________________
consensus             TGTCAGTGATATTCTTCATAGCTTCAAGCTGTGAAACCTCCGGCCCCAAAAACACAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+                                       GTCGTCCCCGTTAGTTACCGACAAAACGTCTA
JMSF027I07+           CATCGGAAGAATTCAAAACCCTGCTATTGTCGTCCCCGTTAGTTACCGACAAAACGTCTA
                      ____________________________________________________________
consensus             CATCGGAAGAATTCAAAACCCTGCTATTGTCGTCCCCGTTAGTTACCGACAAAACGTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           GGTTTTCAACTATGGTGCTCGAAGAACGAGTTTCGAAGGCTTTAGTCTTATCCGGCCACA
JMSF027I07+           GGTTTTCAACTATGGTGCTCGAAGAACGAGTTTCGAAGGCTTTAGTCTTATCCGGCCACA
                      ____________________________________________________________
consensus             GGTTTTCAACTATGGTGCTCGAAGAACGAGTTTCGAAGGCTTTAGTCTTATCCGGCCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           GAATCAGAATCTTGATTTTAGACCCTTTCCTTTTGATGGGCATGTCTGCAAAGACATCAA
JMSF027I07+           GAATCAGAATCTTGATTTTAGACCCTTTCCTTTTGATGGGCATGTCTGCAAAGACATCAA
                      ____________________________________________________________
consensus             GAATCAGAATCTTGATTTTAGACCCTTTCCTTTTGATGGGCATGTCTGCAAAGACATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           CCGCGAGCTGAGAGAGTGAAGAGGGCGAGTCATCGATCACCGGAATCTCGACCCGGAATC
JMSF027I07+           CCGCGAGCTGAGAGAGTGAAGAGGGCGAGTCATCGATCACCGGAATCTCGACCCGGAATC
                      ____________________________________________________________
consensus             CCGCGAGCTGAGAGAGTGAAGAGGGCGAGTCATCGATCACCGGAATCTCGACCCGGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           TGGGTTGCTTTAGCTTCTTGAGCCGGCCGGCGAGTTTGGCATTGTTGAGGGGCTTCTCTA
JMSF027I07+           TGGGTTGCTTTAGCTTCTTGAGCCGGCCGGCGAGTTTGGCATTGTTGAGGGGCTTCTCTA
                      ____________________________________________________________
consensus             TGGGTTGCTTTAGCTTCTTGAGCCGGCCGGCGAGTTTGGCATTGTTGAGGGGCTTCTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           AACTGGTGGAAAGAGAGGTCTTTGCCTGGGAAATAGCTTCTTCCTTGGTGGTAGGTGGGG
JMSF027I07+           AACTGGTGGAAAGAGAGGTCTTTGCCTGGGAAATAGCTTCTTCCTTGGTGGTAGGTGGGG
                      ____________________________________________________________
consensus             AACTGGTGGAAAGAGAGGTCTTTGCCTGGGAAATAGCTTCTTCCTTGGTGGTAGGTGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           -GGGGGAGGAGAGAGCACACTGGGGGAATCTTGATTTGGTTAAGGAAATAGAAAGGTGAT
JMSF027I07+           TGGGGGAGGAGAGAGCACACTGGGGGAATCTTGATTTGGTTAAGGAAATAGAAAGGTGAT
                      ____________________________________________________________
consensus             TGGGGGAGGAGAGAGCACACTGGGGGAATCTTGATTTGGTTAAGGAAATAGAAAGGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           CACAGTGAAGAAGATGATGATGATGGCGTGGAGGGGAGAAGAAAGATGGATACTGAATTT
JMSF027I07+           CACAGTGAAGAAGATGATGATGATGGCGTGGAGGGGAGAAGAAAGATGGATACTGAATTT
                      ____________________________________________________________
consensus             CACAGTGAAGAAGATGATGATGATGGCGTGGAGGGGAGAAGAAAGATGGATACTGAATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           GTGTCAGCTTGAAATGGAAATTGGGGTTTGAAGTTCTGATGAATTGAGAGTGGAATTTTA
JMSF027I07+           GTGTCAGCTTGAAATGGAAATTGGGGTTTGAAGTTCTGATGAATTGAGAGTGGAATTTTA
                      ____________________________________________________________
consensus             GTGTCAGCTTGAAATGGAAATTGGGGTTTGAAGTTCTGATGAATTGAGAGTGGAATTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030G23+           CAAGATTGGAAGCCATTTTAGTATGCAGAGTTTCTGCAAATC                  
JMSF027I07+           CAAGATTGGAAGCCATTTTAGTATGCAGAGTTCCTGCAAATCAAGAACGTTTAGTGCCCC
                      ____________________________________________________________
consensus             CAAGATTGGAAGCCATTTTAGTATGCAGAGTTTCTGCAAATCAAGAACGTTTAGTGCCCC