Contig 012042:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF027G09-                                                             AACAAGTTG
                      ____________________________________________________________
consensus                                                                AACAAGTTG
 
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rJMSF027G09-          AACCTCTTCCTCCTGCTGCAGTGCGAGGATTGTGGAGACGCAACCAGAAAAGGAACATTG
JMFN020F01+                                                              GGAACATTG
                      ____________________________________________________________
consensus             AACCTCTTCCTCCTGCTGCAGTGCGAGGATTGTGGAGACGCAACCAGAAAAGGAACATTG
 
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rJMSF027G09-          GATGTTAAAATGTCTCAATTGAACAAATCTACATATATATATATATATATATATATAT  
JMFN020F01+           GATGTTANAATGTCTCAATTGAACAAATCTCCATATATATATATATATATATATATATAG
                      ____________________________________________________________
consensus             GATGTTAAAATGTCTCAATTGAACAAATCTCCATATATATATATATATATATATATATAG
 
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JMFN020F01+           GTGGCTTATGGCTATTACAATAGTTCAGTTGAAACTGTAGACTTGAGCAGAACTGTGATG
                      ____________________________________________________________
consensus             GTGGCTTATGGCTATTACAATAGTTCAGTTGAAACTGTAGACTTGAGCAGAACTGTGATG
 
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JMFN020F01+           TATGGCTGATTCATGGACAAATTTGAGCTCCAGTTTCTGTAAGTCGTAACCCAAAACAAA
JMSF027G09+                                                               AAAACAAA
                      ____________________________________________________________
consensus             TATGGCTGATTCATGGACAAATTTGAGCTCCAGTTTCTGTAAGTCGTAACCCAAAACAAA
 
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JMFN020F01+           GGCAAAGGGAAAGAGAAGATGGTTCATATGTTATGACTAACAAGATCTGGCACACAAGTG
JMSF027G09+           GGCAAAGGGAAAGAGAAGATGGTTCATATGTTATGACTAACAAGATCTGGCACACAAGTG
                      ____________________________________________________________
consensus             GGCAAAGGGAAAGAGAAGATGGTTCATATGTTATGACTAACAAGATCTGGCACACAAGTG
 
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JMFN020F01+           GAGGGTGATCTAAAGCCCAACCCTTAATTCTTGCAACAGCTTGTCAAGCCTTAATTCGTA
JMSF027G09+           GAGGGTGATCTAAAGCCCAACCCTTAATTCTTGCAACAGCTTGTCAAGCCTTAATTCGTA
                      ____________________________________________________________
consensus             GAGGGTGATCTAAAGCCCAACCCTTAATTCTTGCAACAGCTTGTCAAGCCTTAATTCGTA
 
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JMFN020F01+           CCACAAACGAACATGCAGGCAGGTTAGATATATCTGCAGATACTGCACAAGGAATTCCCA
JMSF027G09+           CCACAAACGAACATGCAGGCAGGTTAGATATATCTGCAGATACTGCACAAGGAATTCCCA
                      ____________________________________________________________
consensus             CCACAAACGAACATGCAGGCAGGTTAGATATATCTGCAGATACTGCACAAGGAATTCCCA
 
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JMFN020F01+           GATTTGAAAGTGCACCTCTGATGATTCCACAAGGGAAATAGAGATGCATGCCTATTGCTT
JMSF027G09+           GATTTGAAAGTGCACCTCTGATGATTCCACAAGGGAAATAGAGATGCATGCCTATTGCTT
                      ____________________________________________________________
consensus             GATTTGAAAGTGCACCTCTGATGATTCCACAAGGGAAATAGAGATGCATGCCTATTGCTT
 
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JMFN020F01+           GTGCAGCTTTGTTCTCAGCCATTGCTGAAGGATCTTGAATAGAACCAGAAGTTTCAAGAG
JMSF027G09+           GTGCAGCTTTGTTCTCAGCCATTGCTGAAGGATCTTGAATAGAACCAGAAGTTTCAAGAG
                      ____________________________________________________________
consensus             GTGCAGCTTTGTTCTCAGCCATTGCTGAAGGATCTTGAATAGAACCAGAAGTTTCAAGAG
 
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JMFN020F01+           ATGGATCCATTGGCATCCGAGATAGCCAGCGAAACCGATTATCTTGCAACACAAAGGTAC
JMSF027G09+           ATGGATCCATTGGCATCCGAGATAGCCAGCGAAACCGATTATCTTGCAACACAAAGGTAC
                      ____________________________________________________________
consensus             ATGGATCCATTGGCATCCGAGATAGCCAGCGAAACCGATTATCTTGCAACACAAAGGTAC
 
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JMFN020F01+           CTCTGTGATTTGTCTTTAGGTTGTCTATCTGTTTCTTAAAGAGTTCAGACCAGAAGTCTT
JMSF027G09+           CTCTGTGATTNGTCTTTAGGTTGTCTATCTGTTTCTTAAAGAGTTCAGACCAGAAGTCTT
                      ____________________________________________________________
consensus             CTCTGTGATTTGTCTTTAGGTTGTCTATCTGTTTCTTAAAGAGTTCAGACCAGAAGTCTT
 
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JMFN020F01+           TGCAAATGAACTTGATAGCTTCCAAATGGTCACTGAATCGAGGTCGTTCC          
JMSF027G09+           TGCAAATGAACTTGATAGCTTCCAAATGGTCACTGAATCGAGGTCGTTCCATTGTGTATC
                      ____________________________________________________________
consensus             TGCAAATGAACTTGATAGCTTCCAAATGGTCACTGAATCGAGGTCGTTCCATTGTGTATC
 
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JMSF027G09+           TTTCGGAAAGTTGGTGGCCAACTTGAAAGCCGATGGCTTCGATCCGGCGGGCGGCGAGCT
                      ____________________________________________________________
consensus             TTTCGGAAAGTTGGTGGCCAACTTGAAAGCCGATGGCTTCGATCCGGCGGGCGGCGAGCT
 
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JMSF027G09+           CCGGCTTGTCGGCGTAGAAGCCATTGCAGTAGGAAGAAACAATCTCGGTTAGAAGACTCT
                      ____________________________________________________________
consensus             CCGGCTTGTCGGCGTAGAAGCCATTGCAGTAGGAAGAAACAATCTCGGTTAGAAGACTCT
 
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JMSF027G09+           CCACGCAGCTCTCTGATACCTCCCTCCCCATTTCCCAATTCTCTCCTTTGATCGTTTCGG
                      ____________________________________________________________
consensus             CCACGCAGCTCTCTGATACCTCCCTCCCCATTTCCCAATTCTCTCCTTTGATCGTTTCGG