Contig 012041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005A09Sequence238016678gb|EYU25041.1|6e-18hypothetical protein MIMGU_mgv1a006116mg [Erythranthe guttata]393012041 (4)gb|AIW09144.1|1e-29progesterone 5-beta-reductase 2 [Catharanthus roseus]
JMSF005C11Sequence335012041 (4)gb|AFZ41795.1|3e-47putative progesterone 5-beta-reductase [Duboisia hopwoodii]115011414 (4)
JMSF027F12Sequence639012041 (4)ref|NP_001266103.1|2e-102putative steroid 5beta-reductase [Solanum lycopersicum] gb|AEX31545.1| putative 741012041 (4)ref|XP_009771311.1|1e-110PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Nicotiana sylvestris

Alignment

This contig is upended


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rJMSF005A09-                                               ATGGAATAGATCGANGCACANAA
rJMSF027F12-                                            AGGATGGAATAGATCGAAGCACAAAA
                      ____________________________________________________________
consensus                                               AGGATGGAATAGATCGAAGCACAAAA
 
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rJMSF005A09-          TTTGACTAANATAATTNAAGGAACAATNTTATGAGCNNTTCATCTCATCAAGTCCATGAA
rJMSF027F12-          TTTGACTAAAATAATTTAAGGAACAATCTTATGAGC-TTTCATCTCATCAA-TCCATGAA
                      ____________________________________________________________
consensus             TTTGACTAAAATAATTTAAGGAACAATCTTATGAGCNTTTCATCTCATCAAGTCCATGAA
 
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rJMSF005A09-          ATGAAGGCTTTGTGGGTGTTNCTAAACNCCAGANACCCATGTTCTTTGCTCTTGTTCATA
rJMSF027F12-          ATGAAGGCTTTGTGGGTGTTCCTAAACCCCAGAAACCCATGTTCTTTGCTCTTGTTCATA
                      ____________________________________________________________
consensus             ATGAAGGCTTTGTGGGTGTTCCTAAACCCCAGAAACCCATGTTCTTTGCTCTTGTTCATA
 
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rJMSF005A09-          CTGTNTAGAGGATAACATATACCTAAGAGAACATCTGCAGACCNCCACACTCCAACATCC
rJMSF027F12-          CTGTCTAGAGGATAACATATACCTAAGATAACATCTGCAAACCACCACACTCCAACATCC
                      ____________________________________________________________
consensus             CTGTCTAGAGGATAACATATACCTAAGATAACATCTGCAGACCACCACACTCCAACATCC
 
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rJMSF005A09-          TCCAATTTCGTAGGTTGCAGGTTGTTTTTCTCCACAATCGCATNCCAAACAGGCCCTTTC
rJMSF027F12-          TCCAATTTCGTAGGTTGCAGGTTGTTTTTCTCCACAATCTCATCCCAAACAGGCCCTTTC
                      ____________________________________________________________
consensus             TCCAATTTCGTAGGTTGCAGGTTGTTTTTCTCCACAATCTCATCCCAAACAGGCCCTTTC
 
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rJMSF005A09-          TNCTTCATCATCTCCTGCAGAGTAAGCCTCTCCCCCTCCTCTTCGAATTCNCCAGCTTCC
rJMSF027F12-          TCGTTCATCATCTCCTGCAGAGTAAGCCTCTCCCCCTCCTCTTCGAATTCCCCAGCTTCC
                      ____________________________________________________________
consensus             TCGTTCATCATCTCCTGCAGAGTAAGCCTCTCCCCCTCCTCTTCGAATTCCCCAGCTTCC
 
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rJMSF005A09-          ACCTCAAACTGNTCCGCCAAGATCTTCCACAAATGCTNCCATTTGAAGACGTCGCCATTG
rJMSF027F12-          ACCTCAAACTGCTCCGCCAAGATCTTCCACAAATGCTTCCATTTGAAGACGTCGCCATTG
                      ____________________________________________________________
consensus             ACCTCAAACTGCTCCGCCAAGATCTTCCACAAATGCTTCCATTTGAAGACGTCGCCATTG
 
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rJMSF005A09-          CTGACGTTGA                                                  
rJMSF027F12-          CTGACGTTGAAAGCTTCGTTCTTGGCGTATGGGTCCACCGCCGCCCAGATCTCTTGCTCC
                      ____________________________________________________________
consensus             CTGACGTTGAAAGCTTCGTTCTTGGCGTATGGGTCCACCGCCGCCCAGATCTCTTGCTCC
 
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rJMSF027F12-          GCAATCAAATCCGCATCGGAGCAAATGGAGTACCCATCCCAGGAATCTTTAATCCCTGGG
                      ____________________________________________________________
consensus             GCAATCAAATCCGCATCGGAGCAAATGGAGTACCCATCCCAGGAATCTTTAATCCCTGGG
 
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rJMSF027F12-          AATCTCAGCGGGGCGCCTTCGTGCTTGCAGATAGCGGCGTAGTCGCAGAGGGTTCCCACG
                      ____________________________________________________________
consensus             AATCTCAGCGGGGCGCCTTCGTGCTTGCAGATAGCGGCGTAGTCGCAGAGGGTTCCCACG
 
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rJMSF027F12-          ATGTTCATCATGCTGTACGGAGAGAAGCCGTGGATGGTTCCCGGCCGGTGAACCGACCAC
                      ____________________________________________________________
consensus             ATGTTCATCATGCTGTACGGAGAGAAGCCGTGGATGGTTCCCGGCCGGTGAACCGACCAC
 
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rJMSF027F12-          GTTAATGTTAATCCCTCCTCCTTCTTCTTCTTAACCTCGTCGAACAGGAGATCCTCGAGA
JMSF027F12+                                TTCTTCTTCTTAACCTCGTCGAACAGGAGATCCTCGAGA
                      ____________________________________________________________
consensus             GTTAATGTTAATCCCTCCTCCTTCTTCTTCTTAACCTCGTCGAACAGGAGATCCTCGAGA
 
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rJMSF027F12-          ACGTAGTAAAAGTTGGGGGCGTCGAGTCGCGGCAAATCCTCGTGATGCGGCGGGTCG   
JMSF027F12+           ACGTAGTAAAAGTTGGGGGCGTCGAGTCGCGGCAAATCCTCGTGATGCGGCGGGTCGTGG
                      ____________________________________________________________
consensus             ACGTAGTAAAAGTTGGGGGCGTCGAGTCGCGGCAAATCCTCGTGATGCGGCGGGTCGTGG
 
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JMSF027F12+           GAGAGTTTTCCGGACAGTTCGAAGGGGCCCCAGTAGTGTTTTTGGCCGGTTTGCAGGCAG
                      ____________________________________________________________
consensus             GAGAGTTTTCCGGACAGTTCGAAGGGGCCCCAGTAGTGTTTTTGGCCGGTTTGCAGGCAG
 
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JMSF027F12+           ATATGCTTCAGATCTGGAGAGTTTGGGACGACGGCGTTTAGGACGTTCCCCAACATTTTC
                      ____________________________________________________________
consensus             ATATGCTTCAGATCTGGAGAGTTTGGGACGACGGCGTTTAGGACGTTCCCCAACATTTTC
 
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JMSF005C11+                                                                    ACA
JMSF027F12+           CGGTTGACTTCACAGTTTTCCAGCTCCGTGGGTCGGTGGGCCCATGTCACGTAGAAGACA
                      ____________________________________________________________
consensus             CGGTTGACTTCACAGTTTTCCAGCTCCGTGGGTCGGTGGGCCCATGTCACGTAGAAGACA
 
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JMSF005C11+           TGCGTGACATCTGTCAGCACAGACAGCTTGGATTGGGCGTCTTCCTCGGCGGAAATATCG
JMSF027F12+           TGCGTGACATCTGTCAGCACAGACAGCTTGGATTGGGCGTCTTCCTCGGCGGAAATATCG
                      ____________________________________________________________
consensus             TGCGTGACATCTGTCAGCACAGACAGCTTGGATTGGGCGTCTTCCTCGGCGGAAATATCG
 
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JMSF005C11+           CACTGGATATACTGGATAGGGTGGTCGGCGTTCCAGGCGGGTCTTGGTCGGCGAGCGACG
JMSF027F12+           CACTGGATATACTGGATAGGGTGGTCGGCGTTCCAGGCGGGTCTTGGTCGGCGAGCGACG
                      ____________________________________________________________
consensus             CACTGGATATACTGGATAGGGTGGTCGGCGTTCCAGGCGGGTCTTGGTCGGCGAGCGACG
 
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JMSF005C11+           CCGTAAACCTTCCATGGGCCGCCGGGCGTGTCAGCCAGAGGGAGGATCTCGGCGAGGCTG
JMSF027F12+           CCGTAAACCTTCCATGGGCCGCCGGGCGTGTCAGCCAGAGGGAGGATCTCGGCGAGGCTG
                      ____________________________________________________________
consensus             CCGTAAACCTTCCATGGGCCGCCGGGCGTGTCAGCCAGAGGGAGGATCTCGGCGAGGCTG
 
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JMSF005C11+           TTGCCGACTATGCCGGTAACGCCGAGGATTAGAGCCACGCTCTGGTG             
JMSF027F12+           TTGCCGACTATGCCGGTAACGCCGAGGATTAGAGCCACGCTCTGGTGTTTGGGTGGCGCG
                      ____________________________________________________________
consensus             TTGCCGACTATGCCGGTAACGCCGAGGATTAGAGCCACGCTCTGGTGTTTGGGTGGCGCG
 
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JMSF027F12+           TCATCTTCTTCTCCAAACCTTTTCTTGGCAGCACCAATGGCGCCGGCCCACCACCAGCTC
                      ____________________________________________________________
consensus             TCATCTTCTTCTCCAAACCTTTTCTTGGCAGCACCAATGGCGCCGGCCCACCACCAGCTC
 
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JMSF027F12+           ATCGTCGGAATCTCTACGCAGATCACTTAAAGTGGAAACGTGTGGCAGATTTATTTGGTC
                      ____________________________________________________________
consensus             ATCGTCGGAATCTCTACGCAGATCACTTAAAGTGGAAACGTGTGGCAGATTTATTTGGTC