Contig 012040:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027D08Sequence645012040 (3)740008550 (3)ref|XP_009618339.1|3e-62PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana to
JMSF031D10Sequence697012040 (3)ref|XP_009618339.1|2e-18PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana to779008550 (3)ref|XP_004249424.1|8e-52PREDICTED: calcium homeostasis endoplasmic reticulum protein [Solanum lycopersi
JMSF048M22Sequence676012040 (3)ref|XP_009618339.1|1e-11PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana to701008550 (3)ref|XP_009618339.1|2e-61PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana to

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031D10+ AGCNGTAGTAATAATGGCCTTCACCACCAAATAGGAAGCTATAACCTGGATTGT
JMSF048M22+ ATAGGAAGCTATAACCTGGATTGT
                      ____________________________________________________________
consensus AGCNGTAGTAATAATGGCCTTCACCACCAAATAGGAAGCTATAACCTGGATTGT
 
. : . : . : . : . : . :
JMSF031D10+ CTTGCTGTTTTTCACGGATCATGGCTTCAAACTCGGGACCATTCTTGACAGCATACTCAA
JMSF048M22+ CTTGCTGTTTTTCACGGATCATGGCTTCAAACTCGGGACCATTCTTGACAGCATACTCAA
JMSF027D08+ GGATCATGGCTTCAAACTCGGGACCATTCTTGACAGCATACTCAA
                      ____________________________________________________________
consensus CTTGCTGTTTTTCACGGATCATGGCTTCAAACTCGGGACCATTCTTGACAGCATACTCAA
 
. : . : . : . : . : . :
JMSF031D10+ TCACTTTATCGATGCGCTTTACAAGTTCGGGATCAGAAGGTGGAGGAGCAGGAGGTGGTG
JMSF048M22+ TCACTTTATCGATGCGCTTTACAAGTTCGGGATCAGAAGGTGGAGGAGCAGGAGGTGGTG
JMSF027D08+ TCACTTTATCGATGCGCTTTACAAGTTCGGGATCAGAAGGTGGAGGAGCAGGAGGTGGTG
                      ____________________________________________________________
consensus TCACTTTATCGATGCGCTTTACAAGTTCGGGATCAGAAGGTGGAGGAGCAGGAGGTGGTG
 
. : . : . : . : . : . :
JMSF031D10+ GAGAATCATAAGGGCCCTGAAAGGGTGATGGAGCAAGGTGAGGAGGCATGTGTGGCGGAA
JMSF048M22+ GAGAATCATAAGGGCCCTGAAAGGGTGATGGAGCAAGGTGAGGAGGCATGTGTGGCGGAA
JMSF027D08+ GAGAATCATAAGGGCCCTGAAAGGGTGATGGAGCAAGGTGAGGAGGCATGTGTGGCGGAA
                      ____________________________________________________________
consensus GAGAATCATAAGGGCCCTGAAAGGGTGATGGAGCAAGGTGAGGAGGCATGTGTGGCGGAA
 
. : . : . : . : . : . :
JMSF031D10+ AAGCTGGGGGAGGATGATGCTGCTGTTGCTGTAGGTGAAGCAGGTGAGGAGGAGGTGGAG
JMSF048M22+ AAGCTGGGGGAGGATGCTGCTGCTGTTGCTGTAGGTGAAGCAGGTGAGGAGGAGGTGGAG
JMSF027D08+ AAGCTGGGGGAGGATGCTGCTGCTGTTGCTGTAGGTGAAGCAGGTGAGGAGGAGGTGGAG
                      ____________________________________________________________
consensus AAGCTGGGGGAGGATGCTGCTGCTGTTGCTGTAGGTGAAGCAGGTGAGGAGGAGGTGGAG
 
. : . : . : . : . : . :
JMSF031D10+ CATGAGGATGAATCTGTGATGGGCGAGGGTAAGGGAACTGTTGAAGAGAAGATTGTGGAG
JMSF048M22+ CATGAGGATGAATCTGTGATGGGCGAGGGTAAGGGAACTGTTGAAGAGAAGATTGTGGAG
JMSF027D08+ CATGAGGATGAATCTGTGATGGGCGAGGGTAAGGGAACTGTTGAAGAGAAGATTGTGGAG
                      ____________________________________________________________
consensus CATGAGGATGAATCTGTGATGGGCGAGGGTAAGGGAACTGTTGAAGAGAAGATTGTGGAG
 
. : . : . : . : . : . :
JMSF031D10+ GTAAAAATGGAGGGCCATGACCTGATGGAGGAAATTGTTGATGCTGTGGGTGAAAACCAA
JMSF048M22+ GTAAAAATGGAGGGCCATGACCTGATGGAGGAAATTGTTGATGCTGTGGGTGAAAACCAA
JMSF027D08+ GTAAAAATGGAGGGCCATGACCTGATGGAGGAAATTGTTGATGCTGTGGGTGAAAACCAA
                      ____________________________________________________________
consensus GTAAAAATGGAGGGCCATGACCTGATGGAGGAAATTGTTGATGCTGTGGGTGAAAACCAA
 
. : . : . : . : . : . :
JMSF031D10+ ACTGTTGCTGCTGTTGCATATTAGCCGCTTGGTACTGTTGTTGGGCAAATGCCATAGCAG
JMSF048M22+ ACTGTTGCTGCTGTTGCATATTAGCCGCTTGGTGCTGTTGTTGGGCAAATGCCATAGCAG
JMSF027D08+ ACTGTTGCTGCTGTTGCATATTAGCCGCTTGGTGCTGTTGTTGGGCAAATGCCATAGCAG
                      ____________________________________________________________
consensus ACTGTTGCTGCTGTTGCATATTAGCCGCTTGGTGCTGTTGTTGGGCAAATGCCATAGCAG
 
. : . : . : . : . : . :
JMSF031D10+ CTGCATAATCATGGGGAGGTCGATCCATCGGCTCTCAGAAAAAATAATAGCACATCTACA
JMSF048M22+ CTGCATAATCATGGGGAGGTCGATCCATCGGCTCTCAGAAAAAATAATAGCACATCTACA
JMSF027D08+ CTGCATAATCATGGGGAGGTCGATCCATCGGCTCTCAGAAAAAATAATAGCACATCTACA
                      ____________________________________________________________
consensus CTGCATAATCATGGGGAGGTCGATCCATCGGCTCTCAGAAAAAATAATAGCACATCTACA
 
. : . : . : . : . : . :
JMSF031D10+ AAAATAAGCTACGCAAGCCCTCCAACACCTTTGCTAGTACGGGGTTGAAGGCTCGCTGCT
JMSF048M22+ AAAATAAGCTACGCAAGCCCTCCAACACCTTTGCTAGTACGGGGTTGAAGGCTCGCTGCT
JMSF027D08+ AAAATAAGCTACGCAAGCCCTCCAACACCTTTGCTAGTACGGGGTTGAAGGCTCGCTGCT
                      ____________________________________________________________
consensus AAAATAAGCTACGCAAGCCCTCCAACACCTTTGCTAGTACGGGGTTGAAGGCTCGCTGCT
 
. : . : . : . : . : . :
JMSF031D10+ CCCAGAGGGAAGAACGGCAAAGGACTGCAGTGACGGAGCTCAGAGGTGGCGATGAACGGC
JMSF048M22+ CCCAGAGGGAAGAACGGCAAAGGACTGCAGTGACGGAGCTCAGAGGTGGCGATGAACGGC
JMSF027D08+ CCCAGAGGGAAGAACGGCAAAGGACTGCAGTGACGGAGCTCAGAGGTGGCGATGAACGGC
                      ____________________________________________________________
consensus CCCAGAGGGAAGAACGGCAAAGGACTGCAGTGACGGAGCTCAGAGGTGGCGATGAACGGC
 
. : . : . : . : . : . :
JMSF031D10+ GGAGGTACCGCCTCTCCGGCGGTGGCTGATTCGATTGTTCCT
JMSF048M22+ GGAGGTACCGCCTCTCCGGCGGTGGCTGATTCGATTGTTCCTAATTAGAT
JMSF027D08+ GGAGGTACCGCCTCTCCGGCGGTGGCTGATTCGATTGTTCCTAATTAGATTGGGGTTTCC
                      ____________________________________________________________
consensus GGAGGTACCGCCTCTCCGGCGGTGGCTGATTCGATTGTTCCTAATTAGATTGGGGTTTCC