| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031A19 | Sequence | 503 | 012030 (8) | emb|CDP14577.1| | 9e-43 | unnamed protein product [Coffea canephora] | 688 | 012030 (8) | ref|XP_011085302.1| | 2e-93 | PREDICTED: eukaryotic translation initiation factor 4E-1-like [Sesamum indicum] |
| JMFF048I04 | Sequence | 327 | 012030 (8) | emb|CDP14577.1| | 2e-08 | unnamed protein product [Coffea canephora] | 270 | 012030 (8) | |||
| JMSF011I08 | Sequence | 314 | 012030 (8) | emb|CDP14577.1| | 6e-06 | unnamed protein product [Coffea canephora] | 696 | 012030 (8) | ref|XP_011085302.1| | 3e-111 | PREDICTED: eukaryotic translation initiation factor 4E-1-like [Sesamum indicum] |
| JMSF025N09 | Sequence | 681 | 012030 (8) | gb|AHA36668.1| | 3e-80 | eukarytic translation initiation factor [Nicotiana glutinosa] | 753 | 012030 (8) | ref|XP_011085302.1| | 6e-101 | PREDICTED: eukaryotic translation initiation factor 4E-1-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF048I04- CTT
____________________________________________________________
consensus CTT
. : . : . : . : . : . :
rJMFF048I04- TTTTTTTTGAGAGAAACCAACTACATTTAACATGACAGAATATGAAATGAAGAGTTATAA
rJMFF031A19- GACAGAATATGAAATGAAGAGTTATAA
rJMSF025N09- TTTGAGAGAAACCAACTACATTTAACATGACAGAATATGAAATGAAGAGTTATAA
____________________________________________________________
consensus TTTTTTTTGAGAGAAACCAACTACATTTAACATGACAGAATATGAAATGAAGAGTTATAA
. : . : . : . : . : . :
rJMFF048I04- CATTAGGTGCACTGTATTGCATATTGGAGGACAGAACAATACTAAATTGAGTGCAACCAT
rJMFF031A19- CATTAGGTGCACTGTATTGCATATTGGAGGACAGAACAATACTAAATTGAGTGCAACCAT
rJMSF025N09- CATTAGGTGCACTGTATTGCATATTGGAGGACAGAACAATACTAAATTGAGTGCAACCAT
rJMSF011I08- ATACTAAATTGAGTGCAACCAT
____________________________________________________________
consensus CATTAGGTGCACTGTATTGCATATTGGAGGACAGAACAATACTAAATTGAGTGCAACCAT
. : . : . : . : . : . :
rJMFF048I04- AGCACATTTGTAAAGAAATATGTTGCACAAAGCAAAAGACAGCAAAAACTTTGCTCCAAA
rJMFF031A19- AGCACATTTGTAAAGAAATATGTTGCACAAAGCAAAAGACAGCAAAAACTTTGCTCCAAA
rJMSF025N09- AGCACATTTGTAAAGAAATATGTTGCACAAAGCAAAAGACAGCAAAAACTTTGCTCCAAA
rJMSF011I08- AGCACATTTGTAAAGAAATATGTTGCACAAAGCAAAAGACAGCAAAAACTTTGCTCCAAA
____________________________________________________________
consensus AGCACATTTGTAAAGAAATATGTTGCACAAAGCAAAAGACAGCAAAAACTTTGCTCCAAA
. : . : . : . : . : . :
rJMFF048I04- ---ATAGTGACCACTGGAAAACTAGCACATAAGGTCTAATACTCGGAATATTTCCCCGCC
rJMFF031A19- ATCATAGTGACCACTGGAAAACTAGCACATAAGGTCTAATACTCGGAATATTTCCCCGCC
rJMSF025N09- ATCATAGTGACCACTGGAAAACTAGCACATAAGGTCTAATACTCGGAATATTTCCCCGCC
rJMSF011I08- ATCATAGTGACCACTGGAAAACTAGCACATAAGGTCTAATACTCGGAATATTTCCCCGCC
____________________________________________________________
consensus ATCATAGTGACCACTGGAAAACTAGCACATAAGGTCTAATACTCGGAATATTTCCCCGCC
. : . : . : . : . : . :
rJMFF048I04- TTATCCACGACGATATCTTGCAGTTGGTTG
rJMFF031A19- TTATCCACGACGATATCTTGCAGTTGGTTGATATGAACGTGCAGGATTGATTATACTGTG
rJMSF025N09- TTATCCACGACGATATCTTGCAGTTGGTTGATATGAACGTGCAGGATTGATTATACTGTG
rJMSF011I08- TTATCCACGACGATATCTTGCAGTTGGTTGATATGAACGTGCAGGATTGATTATACTGTG
____________________________________________________________
consensus TTATCCACGACGATATCTTGCAGTTGGTTGATATGAACGTGCAGGATTGATTATACTGTG
. : . : . : . : . : . :
rJMFF031A19- TAACGATTCTTGGCACCCCTGTCAAGTCTCTTTGCATCGTCGTGAAATATGAAGCCAATT
rJMSF025N09- TAACGATTCTTGGCACCCCTGTCAAGTCTCTTTGCATCGTCGTGAAATATGAAGCCAATT
rJMSF011I08- TAACGATTCTTGGCACCCCTGTCAAGTCTCTTTGCATCGTCGTGAAATATGAAGCCAATT
____________________________________________________________
consensus TAACGATTCTTGGCACCCCTGTCAAGTCTCTTTGCATCGTCGTGAAATATGAAGCCAATT
. : . : . : . : . : . :
rJMFF031A19- GCGTCTTTGTAATCCAGAAACTCCTTCCATTGCTTCCCAATACTAACCTGAGCTGCTTCA
rJMSF025N09- GCGTCTTTGTAATCCAGAAACTCCTTCCATTGCTTCCCAATACTAACCTGAGCTGCTTCA
rJMSF011I08- GCGTCTTTGTAATCCAGAAACTCCTTCCATTGCTTCCCAATACTAACCTGAGCTGCTTCA
____________________________________________________________
consensus GCGTCTTTGTAATCCAGAAACTCCTTCCATTGCTTCCCAATACTAACCTGAGCTGCTTCA
. : . : . : . : . : . :
rJMFF031A19- TTTGCAGCATTTTTGGTCCATATAGCTATTTTTTCCTGTCTAGCACGGACATTGACCACA
rJMSF025N09- TTTGCAGCATTTTTGGTCCATATAGCTATTTTTTCCTGTCTAGCACGGACATTGACCACA
rJMSF011I08- TTTGCAGCATTTTTGGTCCATATAGCTATTTTTTCCTGTCTAGCACGGACATTGACCACA
JMSF025N09+ TGTCTAGCACGGACATTGACCACA
____________________________________________________________
consensus TTTGCAGCATTTTTGGTCCATATAGCTATTTTTTCCTGTCTAGCACGGACATTGACCACA
. : . : . : . : . : . :
rJMFF031A19- GCTCCACATATTTCATCTCCATGGTCAAATTGTTCTCCAATCATTGCCAACAGCGTATAC
rJMSF025N09- GCTCCACATATTTCATCTCCATGGTCAAATTGTTCTCCAATCATTGCCAACAGCGTATAC
rJMSF011I08- GCTCCACATATTTCATCTCCATGGTCAAATTGTTCTCCAATCATTGCCAACAGCGTATAC
JMSF025N09+ GCTCCACATATTTCATCTCCATGGTCAAATTGTTCTCCAATCATTGCCAACAGCGTATAC
____________________________________________________________
consensus GCTCCACATATTTCATCTCCATGGTCAAATTGTTCTCCAATCATTGCCAACAGCGTATAC
. : . : . : . : . : . :
rJMFF031A19- AGCCAGCAGGTGTCAGATTTCCCCTTCGGAAAGGTCATTGTCCACTTTCCTCCATTAGCA
rJMSF025N09- AGCCAGCAGGTGTCAGATTTCCCCTTCGGAAAGGTCATTGTCCACTTTCCTCCATTAGCA
rJMSF011I08- AGCCAGCAGGTGTCAGATTTCCCCTTCGGAAAGGTCATTGTCCACTTTCCTCCATTAGCA
JMSF025N09+ AGCCAGCAGGTGTCAGATTTCCCCTTCGGAAAGGTCATTGTCCACTTTCCTCCATTAGCA
____________________________________________________________
consensus AGCCAGCAGGTGTCAGATTTCCCCTTCGGAAAGGTCATTGTCCACTTTCCTCCATTAGCA
. : . : . : . : . : . :
rJMFF031A19- CAGACTGGATCTTCCCATTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
rJMSF025N09- CAGACTGGATCTTCCCATTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
rJMSF011I08- CAGACTGGATCTTCCCATTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
JMFF031A19+ TTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
JMSF025N09+ CAGACTGGATCTTCCCATTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
____________________________________________________________
consensus CAGACTGGATCTTCCCATTTTGGCTCGATTTTATTCTTGAAACAATGGAAGTCTGCCCCT
. : . : . : . : . : . :
rJMFF031A19- ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
rJMSF025N09- ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
rJMSF011I08- ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
JMFF031A19+ ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
JMSF025N09+ ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
____________________________________________________________
consensus ACAGACAACTTGCTCGGATGGTGTATATTATTGTAAACACTCCAAAAATCTTCAACGGTG
. : . : . : . : . : . :
rJMFF031A19- G
rJMSF025N09- GAGAAAGTATAGATGGGTTGAATATTGCTGCCC
rJMSF011I08- GAGAAAGTATAGATGGGTTGAATATTGCTGCCCCAAGTGGTCTGTTTGGACTTGGCAGAG
JMFF031A19+ GAGAAAGTATAGATGGGTTGAATATTGCTGCCCCAAGTGGTCTGTTTGGACTTGGCAGAG
JMSF011I08+ GGCAGAG
JMFF048I04+ TCTGTTTGGACTTGGCAGAG
JMSF025N09+ GAGAAAGTATAGATGGGTTGAATATTGCTGCCCCAAGTGGTCTGTTTGGACTTGGCAGAG
____________________________________________________________
consensus GAGAAAGTATAGATGGGTTGAATATTGCTGCCCCAAGTGGTCTGTTTGGACTTGGCAGAG
. : . : . : . : . : . :
rJMSF011I08- GGGTTATCAAACCA
JMFF031A19+ GGGTTATCAAACCAGAAGGTCCAAGAGTTCTCTAATGGGTGCTTCAAAACCAAGCCCTTG
JMSF011I08+ GGGTTATCAAACCAGAAGGTCCAAGAGTTCTCTAATGGGTGCTTCAAAACCAAGCCCTTG
JMFF048I04+ GGGTTATCAAACCAGAAGGTCCAAGAGTTCTCTAATGGGTGCTTCAAAACCAAGCCCTTG
JMSF025N09+ GGGTTATCAAACCAGAAGGTCCAAGAGTTCTCTAATGGGTGCTTCAAAACCAAGCCCTTG
____________________________________________________________
consensus GGGTTATCAAACCAGAAGGTCCAAGAGTTCTCTAATGGGTGCTTCAAAACCAAGCCCTTG
. : . : . : . : . : . :
JMFF031A19+ TCGGGGTTGGGCATTTCGTTGGAATCGCCCACAATCTCCCCTTCCTCCGGCC-CATCTCC
JMSF011I08+ TCGGGGTTGGGCATTTCGTTGGAATCGCCCACAATCTCCCCTTCCTCCGGCC-CATCTCC
JMFF048I04+ TCGGGGTTGGGCATTTCGTTGGAATCGCCCACAATCTCCCCTTCCTCCGGCCTCATCTCC
JMSF025N09+ TCGGGGTTGGGCATTTCGTTGGAATCGCCCACAATCTCCCCTTCCTCCGGCC-CATCTCC
____________________________________________________________
consensus TCGGGGTTGGGCATTTCGTTGGAATCGCCCACAATCTCCCCTTCCTCCGGCC-CATCTCC
. : . : . : . : . : . :
JMFF031A19+ CGCCTCTCCTCCGT--CGCCGGGCATGGCTGATGATGAGGACTTCTCCGGTTCCTCATGT
JMSF011I08+ CGCCTCTCCTCCGT--CGCCGGGCCTGGCTGATGATGAGGACTTCTCCGGTTCCTCAGGT
JMFF048I04+ CGCCTCTCCTCCCTTCGCCCTGGCCTGGCTGATGATGAGGACTTCTCCGGTTCCTCAGGT
JMSF025N09+ CGCCTCTCCTCCGT--CGCCGGGCCTGGCTGATGATGAGGACTTCTCCGGTTCCTCAGGT
____________________________________________________________
consensus CGCCTCTCCTCCGT--CGCCGGGCCTGGCTGATGATGAGGACTTCTCCGGTTCCTCAGGT
. : . : . : . : . : . :
JMFF031A19+ TTGGTTGATTTCTCGAGTTCTTCCACCATTTTCAGGGCTTGTGCCTTTTGATCCTCAGAG
JMSF011I08+ TTGGTTGATTTCTCGAGTTCTTCCACCATTTTCAGGGCTTGTGCCTTTTGATCCTCAGAG
JMFF048I04+ TTGGTTGATTTCTCGAGTTCTTCCACCATTTTCAGGGCTTGTGCCTTTTGATCCTCAGAG
JMSF025N09+ TTGGTTGATTTCTCGAGTTCTTCCACCATTTTCAGGGCTTGTGCCTTTTGATCCTCAGAG
____________________________________________________________
consensus TTGGTTGATTTCTCGAGTTCTTCCACCATTTTCAGGGCTTGTGCCTTTTGATCCTCAGAG
. : . : . : . : . : . :
JMFF031A19+ ATTTTTGAAGTGAACGGAAAATCGCACACTGATTTCTTTCTTCGGCCTTCGAAAATGAAA
JMSF011I08+ ATTTTTGAAGTGAACGGAAAATCGCACACTGATTTCTTTCTTCGGCCTTCGAAAATGAAA
JMFF048I04+ ATTTTTGAAGTGAACGGAAAATCGCACACTGATTTCTTTCTTCGGCCTTCGAAAATGAAA
JMSF025N09+ ATTTTTGAAGTGAACGGAAAATCGCACACTGATTTCTTTCTTCGGCCTTCGAAAATGAAA
____________________________________________________________
consensus ATTTTTGAAGTGAACGGAAAATCGCACACTGATTTCTTTCTTCGGCCTTCGAAAATGAAA
. : . : . : . : . : . :
JMFF031A19+ CTTCGCCGAGTAAAAATTATCGCCGCCTTCGTAGAGGTACTAT
JMSF011I08+ CTTCGCC
JMFF048I04+ CTTCGCC
JMSF025N09+ CTTCGCCGAGTAAAAATTATCGCCGCCTTCGTAGAGGTACTATATCAACCTAGTCTCTCC
____________________________________________________________
consensus CTTCGCCGAGTAAAAATTATCGCCGCCTTCGTAGAGGTACTATATCAACCTAGTCTCTCC