| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF044E19 | Sequence | 632 | 012028 (7) | ref|XP_006352682.1| | 6e-53 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 639 | 009789 (7) | ref|XP_009775386.1| | 3e-61 | PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris] |
| JMSF002I14 | Sequence | 402 | 012028 (7) | ref|XP_006352682.1| | 3e-23 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 695 | 009789 (7) | ref|XP_009775386.1| | 5e-111 | PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris] |
| JMSF007F13 | Sequence | 413 | 012028 (7) | ref|XP_006352682.1| | 4e-23 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 764 | 009789 (7) | ref|XP_011089660.1| | 2e-146 | PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum] |
| JMSF011G21 | Sequence | 252 | 012028 (7) | 764 | 009789 (7) | ref|XP_009775386.1| | 8e-112 | PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris] | |||
| JMSF019C04 | Sequence | 311 | 012028 (7) | ref|XP_006352682.1| | 1e-12 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 759 | 009789 (7) | ref|XP_011089660.1| | 1e-143 | PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum] |
| JMSF025M11 | Sequence | 606 | 012028 (7) | ref|XP_006352682.1| | 3e-48 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 762 | 009789 (7) | ref|XP_011089660.1| | 4e-136 | PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum] |
| JMSF035J02 | Sequence | 668 | 012028 (7) | ref|XP_006352682.1| | 2e-72 | PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum] | 634 | 009789 (7) | ref|XP_009775386.1| | 1e-105 | PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF035J02+ GCTGATCATTCACAGCAAAAATAGTATCCTTGAGCTTCTGAATCTTTAAC
____________________________________________________________
consensus GCTGATCATTCACAGCAAAAATAGTATCCTTGAGCTTCTGAATCTTTAAC
. : . : . : . : . : . :
JMSF035J02+ TGATTATCAAAAGACTCCTTTGCCTCAGCAACAACTTGACGCGTGACTTTGATTCTTTCT
JMFF044E19+ GCAACAACTTGACGCGTGACTTTGATTCTNTCT
JMSF025M11+ TCT
____________________________________________________________
consensus TGATTATCAAAAGACTCCTTTGCCTCAGCAACAACTTGACGCGTGACTTTGATTCTTTCT
. : . : . : . : . : . :
JMSF035J02+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
JMFF044E19+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
JMSF025M11+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
____________________________________________________________
consensus TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
. : . : . : . : . : . :
JMSF035J02+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
JMFF044E19+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
JMSF025M11+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
____________________________________________________________
consensus AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
. : . : . : . : . : . :
JMSF007F13+ CAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF035J02+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF002I14+ TTTCGAGCATAGGAAGCATAAGCC
JMFF044E19+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF025M11+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
____________________________________________________________
consensus AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
. : . : . : . : . : . :
JMSF007F13+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF035J02+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF002I14+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMFF044E19+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF025M11+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
____________________________________________________________
consensus AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
. : . : . : . : . : . :
JMSF007F13+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF019C04+ ATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF035J02+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF002I14+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMFF044E19+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF025M11+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
____________________________________________________________
consensus GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
. : . : . : . : . : . :
JMSF007F13+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF019C04+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF035J02+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF002I14+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF011G21+ GATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMFF044E19+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF025M11+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
____________________________________________________________
consensus AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
. : . : . : . : . : . :
JMSF007F13+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF019C04+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF035J02+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF002I14+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF011G21+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMFF044E19+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF025M11+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
____________________________________________________________
consensus AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
. : . : . : . : . : . :
JMSF007F13+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF019C04+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF035J02+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF002I14+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF011G21+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMFF044E19+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF025M11+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
____________________________________________________________
consensus GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
. : . : . : . : . : . :
JMSF007F13+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF019C04+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF035J02+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF002I14+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF011G21+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMFF044E19+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF025M11+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
____________________________________________________________
consensus ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
. : . : . : . : . : . :
JMSF007F13+ CACAGTTTAGTAGGAG
JMSF019C04+ CACAGTTTAGTAGGAG
JMSF035J02+ CACAGTTTAGTAGGAG
JMSF002I14+ CACAGTTTAGTAGGAGT
JMSF011G21+ CACAGTTTAGTAGGAGTGGTAGTTTCTG
JMFF044E19+ CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGT
JMSF025M11+ CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGTC
____________________________________________________________
consensus CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGTC