Contig 012026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011P06Sequence312012026 (3)gb|KHF97501.1|6e-08Maltoporin [Gossypium arboreum]675004274 (4)ref|XP_004243351.1|4e-46PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum]
JMSF018E01Sequence246012026 (3)ref|XP_006357482.1|2e-11PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum]779004274 (4)ref|XP_004243351.1|1e-53PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum]
JMSF025K15Sequence654012026 (3)ref|XP_006357482.1|1e-64PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum]779004274 (4)ref|XP_006367642.1|7e-53PREDICTED: adenylate cyclase, terminal-differentiation specific-like [Solanum t

Alignment

This contig is upended


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JMSF025K15+                 TCAAGTGAATTGAGCTTGGTATCCGCTGCTCCATGATCACGAATCATATGAGAC
                      ____________________________________________________________
consensus                   TCAAGTGAATTGAGCTTGGTATCCGCTGCTCCATGATCACGAATCATATGAGAC
 
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JMSF025K15+           TGTACTTCTCCAATCGATTTATCAAGATTGTAACAATATAATTCCAACTGAGACAGCCGT
                      ____________________________________________________________
consensus             TGTACTTCTCCAATCGATTTATCAAGATTGTAACAATATAATTCCAACTGAGACAGCCGT
 
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JMSF025K15+           GAACTAATTCCCTCAAGGAAACGCATCAGATTGTCAGCATACTTCTTCATGGTCATGTCA
                      ____________________________________________________________
consensus             GAACTAATTCCCTCAAGGAAACGCATCAGATTGTCAGCATACTTCTTCATGGTCATGTCA
 
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JMSF025K15+           ACAGTAACCATAACATCTTCATTAAATGACGATTCTTCAGGAAGCCTATAAGGCGGAGCA
                      ____________________________________________________________
consensus             ACAGTAACCATAACATCTTCATTAAATGACGATTCTTCAGGAAGCCTATAAGGCGGAGCA
 
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JMSF018E01+                                                       TGCAGAAGTGGACGCA
JMSF025K15+           GTAAACATAGATGATCTCGTCATTCTGTTTTTTTGGAACTCCTTTGCAGAAGTGGACGCA
                      ____________________________________________________________
consensus             GTAAACATAGATGATCTCGTCATTCTGTTTTTTTGGAACTCCTTTGCAGAAGTGGACGCA
 
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JMSF011P06+                     CGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
JMSF018E01+           GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
JMSF025K15+           GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
                      ____________________________________________________________
consensus             GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
 
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JMSF011P06+           GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
JMSF018E01+           GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
JMSF025K15+           GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
                      ____________________________________________________________
consensus             GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
 
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JMSF011P06+           GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
JMSF018E01+           GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
JMSF025K15+           GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
                      ____________________________________________________________
consensus             GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
 
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JMSF011P06+           TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
JMSF018E01+           TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATC           
JMSF025K15+           TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
                      ____________________________________________________________
consensus             TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
 
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JMSF011P06+           GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
JMSF025K15+           GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
                      ____________________________________________________________
consensus             GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
 
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JMSF011P06+           ATGAACCAACGTGAAAATCAT                                       
JMSF025K15+           ATGAACCAACGTGAAAATCATGGCGGTTAGACTTCGAGGTTTGGTACTGAAGAAAGGCAC
                      ____________________________________________________________
consensus             ATGAACCAACGTGAAAATCATGGCGGTTAGACTTCGAGGTTTGGTACTGAAGAAAGGCAC