Contig 012023:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025C04-                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMSF025C04-          AGAGTGTATCCAACAACATAGTTTTCAACAACCCTAGCTACTAGATAGTACACAACAGCA
                      ____________________________________________________________
consensus             AGAGTGTATCCAACAACATAGTTTTCAACAACCCTAGCTACTAGATAGTACACAACAGCA
 
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rJMSF042H20-                                                   TCGCGAAAACACTACTCAN
rJMSF025C04-          TACATTTAGTACGGGATCGGAGGCTACTACTGTAACTACACTCGCGAAAACACTACTCAC
                      ____________________________________________________________
consensus             TACATTTAGTACGGGATCGGAGGCTACTACTGTAACTACACTCGCGAAAACACTACTCAC
 
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rJMSF042H20-          AGAGGCTTATAGTCNAAAGCAGAGAAGAGATGAGATGTCGCGTTTTCCATTTCTCTGCAC
rJMSF025C04-          AGAGGCTTATAGTCTAAAGCAGAGAAGAGATGAGATGTCGCGTTTTCCATTTCTCTGCAC
                      ____________________________________________________________
consensus             AGAGGCTTATAGTCTAAAGCAGAGAAGAGATGAGATGTCGCGTTTTCCATTTCTCTGCAC
 
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rJMSF042H20-          TGTACACAGTNCAAAACACCCACCGCAATGGAACCATCTTCNCGCCTCGCCACTCTNCAG
rJMSF025C04-          TGTACACAGTACAAAACACCCACCGCAATGGAACCATCTTCTCGCCTCGCCACTCTTCAG
                      ____________________________________________________________
consensus             TGTACACAGTACAAAACACCCACCGCAATGGAACCATCTTCTCGCCTCGCCACTCTTCAG
 
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rJMSF042H20-          CCTACCNCTTCTGCCGCTTGGGCTCAACCTTGCCACTA                      
rJMSF025C04-          CCTACCTCTTCTGCCGCTTGGGCTCAACCTTGCCACTAGTTATTCGAGAAGCATCATCTG
                      ____________________________________________________________
consensus             CCTACCTCTTCTGCCGCTTGGGCTCAACCTTGCCACTAGTTATTCGAGAAGCATCATCTG
 
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rJMSF025C04-          AGTTCTGGGGCTTTTTCACATTCTGATCGGATGCACAATCAGAGCAAACGAATTGATCGA
JMSF042H20+                                 CTGATCGGATGCACAATCAGAGCAAACGAATTGATCGA
                      ____________________________________________________________
consensus             AGTTCTGGGGCTTTTTCACATTCTGATCGGATGCACAATCAGAGCAAACGAATTGATCGA
 
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rJMSF025C04-          GTTGTTTTGTCTGCTCGACAGACATGCCCACACAGACAGGATGATACCAGTCCTTGCACT
JMSF042H20+           GTTGTTTTGTCTGCTCGACAGACATGCCCACACAGACAGGATGATACCAGTCCTTGCACT
                      ____________________________________________________________
consensus             GTTGTTTTGTCTGCTCGACAGACATGCCCACACAGACAGGATGATACCAGTCCTTGCACT
 
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rJMSF025C04-          CCTCGCATTGTACCATCAGGTCATCGGGATTATACGGAAGCTCACACTTGCAATACACTG
JMSF042H20+           CCTCGCATTGTACCATCAGGTCATCGGGATTATACGGAAGCTCACACTTGCAATACACTG
JMSF025C04+                                                             CAATACACTG
                      ____________________________________________________________
consensus             CCTCGCATTGTACCATCAGGTCATCGGGATTATACGGAAGCTCACACTTGCAATACACTG
 
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rJMSF025C04-          CAACACGGTCTGGTATGAAAGCTCCAGTTGCAGCTTTATACTCGAATCGACAATAGTAAT
JMSF042H20+           CAACACGGTCTGGTATGAAAGCTCCAGTTGCAGCTTTATACTCGAATCGACAATAGTAAT
JMSF025C04+           CAACACGGTNTGGTATGAAAGCTCCAGTTGCAGCTTTATACTCGAATCGACAATAGTAAT
                      ____________________________________________________________
consensus             CAACACGGTCTGGTATGAAAGCTCCAGTTGCAGCTTTATACTCGAATCGACAATAGTAAT
 
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rJMSF025C04-          CCTCTGTCCCAACGTTCTGAAGCTTAACATAGGCCCTGAAAGTGTGAACACTGCACTTCC
JMSF042H20+           CCTCTGTCCCAACGTTCTGAAGCTTAACATAGGCCCTGAAAGTGTGAACACTGCACTTCC
JMSF025C04+           CCTCTGTCCCAACGTTCTGAAGCTTAACATAGGCCCTGAAAGTGTGAACACTGCACTTCC
                      ____________________________________________________________
consensus             CCTCTGTCCCAACGTTCTGAAGCTTAACATAGGCCCTGAAAGTGTGAACACTGCACTTCC
 
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rJMSF025C04-          CTTCTATAGTGTCAGCACTTTGAACATCATAGTGGTCCGACAGGAATAACTCTTTCGCTC
JMSF042H20+           CTTCTATAGTGTCAGCACTTTGAACATCATAGTGGTCCGACAGGAATAACTCTTTCGCTC
JMSF025C04+           CTTCTATAGTGTCAGCACTTTGAACATCATAGTGGTCCGACAGGAATAACTCTTTCGCTC
                      ____________________________________________________________
consensus             CTTCTATAGTGTCAGCACTTTGAACATCATAGTGGTCCGACAGGAATAACTCTTTCGCTC
 
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rJMSF025C04-          CATGAAACTGGCGTCGCCCTCCCATTGACTCCTCTGGCCGGTAATACCACCTAACCCGTA
JMSF042H20+           CATGAAACTGGCGTCGCCCTCCCATTGACTCCTCTGGCCGGTAATACCACCTAACCCGTA
JMSF025C04+           CATGAAACNGGCGTCGCCCTCCCATTGACTCCTCTGGCCGGTAATACCACCTAACCCGTA
                      ____________________________________________________________
consensus             CATGAAACTGGCGTCGCCCTCCCATTGACTCCTCTGGCCGGTAATACCACCTAACCCGTA
 
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rJMSF025C04-          CTTTCACATTGTTCCGATTATCAGCTTCGATTTTCTC                       
JMSF042H20+           CTTTCACATTGTTCCGATTATCAGCTTCGATTTTCTCCACTCGTGCCACATAAGAGGCAG
JMSF025C04+           CTTTCACATTGTTCCGATTATCAGCTTCGATTTTCTCCACTCGTGCCACATAAGAGGCAG
                      ____________________________________________________________
consensus             CTTTCACATTGTTCCGATTATCAGCTTCGATTTTCTCCACTCGTGCCACATAAGAGGCAG
 
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JMSF042H20+           TGCCACTTTCCGGAGGGCGCATCAACACACAGTCTCCAGCTTTGACAACCTTGTTAGTGC
JMSF025C04+           TGCCACTTTCCGGAGGGCGCATCAACACACAGTCTCCAGCTTTGACAACCTTGTTAGTGC
                      ____________________________________________________________
consensus             TGCCACTTTCCGGAGGGCGCATCAACACACAGTCTCCAGCTTTGACAACCTTGTTAGTGC
 
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JMSF042H20+           CTCTAATGGTGTAAGAGTCCAAGTCTCGTTTCCCAGGTCTGGTCTTGGCCATGGAACAAT
JMSF025C04+           CTCTAATGGTGTAAGAGTCCAAGTCTCGTTTCCCAGGTCTGGTCTTGGCCATGGAACAAT
                      ____________________________________________________________
consensus             CTCTAATGGTGTAAGAGTCCAAGTCTCGTTTCCCAGGTCTGGTCTTGGCCATGGAACAAT
 
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JMSF042H20+           CAAAGACGAGAATGGGTTTCTAATTTCTATGGCCCAATCCAAAGGTGTCAGATTGCTGCT
JMSF025C04+           CAAAGACGAGAATGGGTTTCTAATTTCTATGGCCCAATCCAAAGGTGTCAGATTGCTGCT
                      ____________________________________________________________
consensus             CAAAGACGAGAATGGGTTTCTAATTTCTATGGCCCAATCCAAAGGTGTCAGATTGCTGCT
 
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JMSF042H20+           CGCGGGCGCTGATACAATAGAT---GATACGCGTCTTCTGGAGGATCTGAGCTGGAGCTG
JMSF025C04+           CGCGGGCGCTGATACAATAGATCTGGATACGCGTCTTCTGGAGGATCTGAGCTGGAGCTG
                      ____________________________________________________________
consensus             CGCGGGCGCTGATACAATAGATCTGGATACGCGTCTTCTGGAGGATCTGAGCTGGAGCTG
 
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JMSF042H20+           AGGGGCATGGAAATGGAGTTTTTGGTGAGAATGGAGGGAGGGTCGTTTGATCCTAAACCC
JMSF025C04+           AGGGGCATGGAAATGGAGTTTTTGGTGAGAATGGAGGGAGGGTCGTTTGATCCTAAACCC
                      ____________________________________________________________
consensus             AGGGGCATGGAAATGGAGTTTTTGGTGAGAATGGAGGGAGGGTCGTTTGATCCTAAACCC
 
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JMSF025C04+           TAGATCCTTCTTCTTTGGCTCTTCCCAGGTAGTGTTCGTCGAGGATAAGAAAGATTGTTC
                      ____________________________________________________________
consensus             TAGATCCTTCTTCTTTGGCTCTTCCCAGGTAGTGTTCGTCGAGGATAAGAAAGATTGTTC