Contig 012021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS117E10Sequence478012021 (2)emb|CDP17451.1|2e-44unnamed protein product, partial [Coffea canephora]
JMSF024O01Sequence605012021 (2)emb|CDP17451.1|3e-46unnamed protein product, partial [Coffea canephora]744015044emb|CDP15925.1|2e-53unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS117E10+ GATGGAATCTGA
                      ____________________________________________________________
consensus GATGGAATCTGA
 
. : . : . : . : . : . :
JMFS117E10+ CCACTCAATTGATTTGATCTGAGAGACAAGCTTTGTAGCTGCCTGTAGTTATCACAAATG
                      ____________________________________________________________
consensus CCACTCAATTGATTTGATCTGAGAGACAAGCTTTGTAGCTGCCTGTAGTTATCACAAATG
 
. : . : . : . : . : . :
JMFS117E10+ CCCGCCGGAATAATCCCAGAGAGACTATTGTATTTCATGGCTACAAATTGCAAGGAAGAA
JMSF024O01+ GCAAGGAAGAA
                      ____________________________________________________________
consensus CCCGCCGGAATAATCCCAGAGAGACTATTGTATTTCATGGCTACAAATTGCAAGGAAGAA
 
. : . : . : . : . : . :
JMFS117E10+ ATGTTGTATATAGTTGGGGGGATGTTTCCAGTGAGATTGTTGTAGGACAGATCCAAACTC
JMSF024O01+ ACGTTGTACAAAGTTGCAGGAATGTTTCCAGAGAGATGGTTGTAGGACATATCCAAACTC
                      ____________________________________________________________
consensus ATGTTGTATATAGTTGGGGGGATGTTTCCAGTGAGATTGTTGTAGGACATATCCAAACTC
 
. : . : . : . : . : . :
JMFS117E10+ TGGAGTTTGGTCAAGAATCCAATGCTTTCTGGGATTTGGCCATGGAAACTATTGGTGCTG
JMSF024O01+ TGGAGTTTGGTCAAGAATCCAATGCTTTCTGGGATTTGGCCATGGAAACTATTGCTGCTG
                      ____________________________________________________________
consensus TGGAGTTTGGTCAAGAATCCAATGCTTTCTGGGATTTGGCCATGGAAACTATTGGTGCTG
 
. : . : . : . : . : . :
JMFS117E10+ ATGTTGAAAGTTGCAAGGAATGAGAGGCCACCAATCTCCTCAGGAATGGTGCCGTTGAGA
JMSF024O01+ ATGTTGAAAGTTGCAAGGAATGAGAGGCCACCAATCTCCTCAGGAATGGTGCCTTTGAGA
                      ____________________________________________________________
consensus ATGTTGAAAGTTGCAAGGAATGAGAGGCCACCAATCTCCTCAGGAATGGTGCCTTTGAGA
 
. : . : . : . : . : . :
JMFS117E10+ CCCATATTGAAGAGATTCAATTGGGTCACTCTTTGGTGCTTAGC---ATTGCAAGTAACG
JMSF024O01+ CCCATATTGAAGAGATTCAATTGGGTCACTCTTTGGTGCTTAGCATTATTGCAAGTAATG
                      ____________________________________________________________
consensus CCCATATTGAAGAGATTCAATTGGGTCACTCTTTGGTGCTTAGCATTATTGCAAGTAATG
 
. : . : . : . : . : . :
JMFS117E10+ CCAATCCAATCACAGTGTGGAGTTTGGAGAGACCAATTGTTGGACAAGATTTGAAAAGGG
JMSF024O01+ CCAATCCAATCACAGTGTGGAGTTTGGAGAGACCAGTTGTTGGACAAGATTTGAAAAGGG
                      ____________________________________________________________
consensus CCAATCCAATCACAGTGTGGAGTTTGGAGAGACCAGTTGTTGGACAAGATTTGAAAAGGG
 
. : . : . : . : . : . :
JMFS117E10+ TCGGATGTGATTGCTCCTTTCAATGCCAATAGAGCAGTCTCATCAGATG
JMSF024O01+ TCGGATGTGATTGCTCCTTTCAATGCCAATAGAGCAGCCTCATCAGATGATGATACCGTG
                      ____________________________________________________________
consensus TCGGATGTGATTGCTCCTTTCAATGCCAATAGAGCAGTCTCATCAGATGATGATACCGTG
 
. : . : . : . : . : . :
JMSF024O01+ GAGGCCACGGCATGAGTTCCAATTGAAAGGGATTGCACTAAAACAACCAAAACCAAACAC
                      ____________________________________________________________
consensus GAGGCCACGGCATGAGTTCCAATTGAAAGGGATTGCACTAAAACAACCAAAACCAAACAC
 
. : . : . : . : . : . :
JMSF024O01+ CATTGCATTGATACTAAGAAACTCATATTTGCATGCAAGCAACCTACCCAATTACTTCTC
                      ____________________________________________________________
consensus CATTGCATTGATACTAAGAAACTCATATTTGCATGCAAGCAACCTACCCAATTACTTCTC