Contig 012019:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS082G09+                                                                 GGGGGT
JMSF024H12+                                                               CCGGGGGT
                      ____________________________________________________________
consensus                                                                 CCGGGGGT
 
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JMFS082G09+           GTCCCGCCCCCCGATAAGGACACGGTCGGGGTTGAAAAGGTCCTGAATGNCAGTCCCCTC
JMSF024H12+           GTCCCGCCCCCCGATAAGGACACGGTCGGGGTTGAAAAGGTCCTGAATTGCAGTCCCCTC
                      ____________________________________________________________
consensus             GTCCCGCCCCCCGATAAGGACACGGTCGGGGTTGAAAAGGTCCTGAATTGCAGTCCCCTC
 
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JMFS082G09+           AGCAAGGAACTCCGGGTTCGAGAGGATTTGGTACTTGATTCCCTTGCTGTTATGGGACAG
JMSF024H12+           AGCAAGGAACTCCGGGTTCGAGAGGATTTGGTACTTGATTCCCTTGCTGTTATGGGACAG
                      ____________________________________________________________
consensus             AGCAAGGAACTCCGGGTTCGAGAGGATTTGGTACTTGATTCCCTTGCTGTTATGGGACAG
 
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JMFS082G09+           GATCTTCTCAATCGCCTCGGCTGTCTTAACCGGGACAGTTGACTTCTCGACAACAATCTT
JMSF024H12+           GATCTTCTCAATCGCCTCGGCTGTCTTAACCGGGACAGTTGACTTCTCGACAACAATCTT
                      ____________________________________________________________
consensus             GATCTTCTCAATCGCCTCGGCTGTCTTAACCGGGACAGTTGACTTCTCGACAACAATCTT
 
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JMFS082G09+           GTCTGATTTGGACACATCCGCTATCATTCGAGCAGCGCTCTCCCAGTAGGTAAGATCAGC
JMSF024H12+           GTCTGATTTGGACACATCCGCTATCATTCGAGCAGCGCTCTCCCAGTAGGTAAGATCAGC
                      ____________________________________________________________
consensus             GTCTGATTTGGACACATCCGCTATCATTCGAGCAGCGCTCTCCCAGTAGGTAAGATCAGC
 
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JMFS082G09+           AGCCTTGCCCGCCCCAAGGCCTCGGGTCTTGGTCGGGGTGTTGACAGACACGAAGATTAT
JMSF024H12+           AGCCTTGCCCGCCCCAAGGCCTCGGGTCTTGGTCGGGGTGTTGACAGACACGAAGATTAT
                      ____________________________________________________________
consensus             AGCCTTGCCCGCCCCAAGGCCTCGGGTCTTGGTCGGGGTGTTGACAGACACGAAGATTAT
 
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JMFS082G09+           GTCAGCTTCTGAGACATGTTTCTCAACATCAGTGCTGAAGAAAAGGTTCTTCCCTCTGCA
JMSF024H12+           GTCAGCTTCTGAGACATGTTTCTCAACATCAGTGCTGAAGAAAAGGTTCTTCCCTCTGCA
                      ____________________________________________________________
consensus             GTCAGCTTCTGAGACATGTTTCTCAACATCAGTGCTGAAGAAAAGGTTCTTCCCTCTGCA
 
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JMFS082G09+           CTGCTTCACCACTTCATCAAGACCGGGCTCGTAAATCGGGAGCTCATCGCTGTTCCACGC
JMSF024H12+           CTGCTTCACCACTTCATCAAGACCGGGCTCGTAAATCGGGAGCTCATCGCTGTTCCACGC
                      ____________________________________________________________
consensus             CTGCTTCACCACTTCATCAAGACCGGGCTCGTAAATCGGGAGCTCATCGCTGTTCCACGC
 
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JMFS082G09+           ATTGATGCGTGACACCGAGATATCAACAACAGCCACTTCGATCGAGGGGCACTTCAGGGC
JMSF024H12+           ATTGATGCGTGACACCGAGATATCAACAACAGCCACTTCGATCGAGGGGCACTTCAGGGC
                      ____________________________________________________________
consensus             ATTGATGCGTGACACCGAGATATCAACAACAGCCACTTCGATCGAGGGGCACTTCAGGGC
 
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JMFS082G09+           AATCACAGCCATCGTTGGACCCCCGACATATCCCGCACCAATGCAGCAGATCTTCACCAT
JMSF024H12+           AATCACAGCCATCGTTGGACCCCCGAC--ATCCCGCACCAATGCAGCAGATCTTCACCAT
                      ____________________________________________________________
consensus             AATCACAGCCATCGTTGGACCCCCGACATATCCCGCACCAATGCAGCAGATCTTCACCAT
 
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JMFS082G09+           TTTTACAGCTTCCACCTGCTATGCAACCTCCTCAAGGATTTGCCAAAGGAATTTGATAAA
JMSF024H12+           TTTTACAGCTTCCACCTGCTATGCAACCTCCTCAAGGATTTGCCAAAGGAATTTGATAAA
                      ____________________________________________________________
consensus             TTTTACAGCTTCCACCTGCTATGCAACCTCCTCAAGGATTTGCCAAAGGAATTTGATAAA
 
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JMFS082G09+           AGAGAGATGGGAAAAAAGATGGGTCCTAGAGAGAAA                        
JMSF024H12+           AGAGAGATGGGAAAAAAGATGGGTCCTAGAGAGAAAAGAGAGGACTTCTATGTGATGGTC
                      ____________________________________________________________
consensus             AGAGAGATGGGAAAAAAGATGGGTCCTAGAGAGAAAAGAGAGGACTTCTATGTGATGGTC