| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034J14 | Sequence | 572 | 012017 (9) | ref|XP_009798820.1| | 3e-57 | PREDICTED: COP9 signalosome complex subunit 7 isoform X2 [Nicotiana sylvestris] | 724 | 012017 (9) | gb|KJB49249.1| | 2e-25 | hypothetical protein B456_008G108700 [Gossypium raimondii] |
| JMSF010O21 | Sequence | 273 | 023141 | ref|XP_009595890.1| | 3e-05 | PREDICTED: COP9 signalosome complex subunit 7 isoform X2 [Nicotiana tomentosifo | 760 | 012017 (9) | gb|KJB49249.1| | 4e-46 | hypothetical protein B456_008G108700 [Gossypium raimondii] |
| JMSF023O12 | Sequence | 656 | 012017 (9) | ref|XP_006347959.1| | 4e-72 | PREDICTED: COP9 signalosome complex subunit 7-like isoform X3 [Solanum tuberosu | |||||
| JMSF039J24 | Sequence | 662 | 012017 (9) | ref|XP_006347959.1| | 3e-84 | PREDICTED: COP9 signalosome complex subunit 7-like isoform X3 [Solanum tuberosu | 823 | 012017 (9) | ref|XP_007052305.1| | 5e-42 | Proteasome component (PCI) domain protein isoform 1 [Theobroma cacao] gb|EOX964 |
| JMSF042G02 | Sequence | 405 | 012017 (9) | 356 | 012017 (9) | ||||||
| JMSF043G02 | Sequence | 345 | 012017 (9) | 780 | 019416 | ref|XP_009791338.1| | 1e-32 | PREDICTED: uncharacterized protein LOC104238623 isoform X2 [Nicotiana sylvestri | |||
This contig is upended
. : . : . : . : . : . :
JMSF043G02+ TTTTTTTTTTGAAACGCATCCAAGGAAT
JMSF042G02+ TTTTTTTTTTGAAACGCATCCAAGGAAT
____________________________________________________________
consensus TTTTTTTTTTGAAACGCATCCAAGGAAT
. : . : . : . : . : . :
JMSF043G02+ TCCATTCATTGGGGAAACTGAAATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
JMSF042G02+ TCCATTCATTGGGGAAACTGAAATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
rJMSF042G02- AATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
rJMFF034J14- GGGAAACTGAAATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
rJMSF039J24- AATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
____________________________________________________________
consensus TCCATTCATTGGGGAAACTGAAATTTTCGCAGTAAAAATCAAACCATTCCTACATTCATC
. : . : . : . : . : . :
JMSF043G02+ AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
JMSF042G02+ AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
rJMSF042G02- AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
rJMFF034J14- AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
rJMSF010O21- GTAATTCAGAGTGATGGATCTAACATAT
rJMSF039J24- AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
____________________________________________________________
consensus AAACTAATTTTAGCAACTATATAATGTACTCTGTAATTCAGAGTGATGGATCTAACATAT
. : . : . : . : . : . :
JMSF043G02+ TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
JMSF042G02+ TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
rJMSF042G02- TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
rJMFF034J14- TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
rJMSF010O21- TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
rJMSF039J24- TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
____________________________________________________________
consensus TCCATCACGGCGGTGAGTGAACGAAAGCACATTGATAGGTATGATAAACTTCAGCTGCTT
. : . : . : . : . : . :
JMSF043G02+ CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
JMSF042G02+ CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
rJMSF042G02- CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
rJMFF034J14- CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
rJMSF010O21- CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
rJMSF039J24- CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
____________________________________________________________
consensus CCCCGTACTTGATCTTCTTGTGCCAACTTTAAAAAATAAAAAAGTCAATGAGGTTTACAT
. : . : . : . : . : . :
JMSF043G02+ ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
JMSF042G02+ ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
rJMSF042G02- ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
rJMFF034J14- ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
rJMSF010O21- ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
rJMSF039J24- ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
____________________________________________________________
consensus ACAAAAGCTTGTACTGTCAATACTTCAAGTCTAAAATTTGATTTTGTAAGAGCTCAATTC
. : . : . : . : . : . :
JMSF043G02+ CAAGGC
JMSF042G02+ CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
rJMSF042G02- CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
rJMFF034J14- CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
rJMSF010O21- CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
rJMSF039J24- CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
____________________________________________________________
consensus CAAGGCAACAACATTATCTAAAGCAGCAAGCAAGCAATCACGCGTTGTTGGTATGGCCAA
. : . : . : . : . : . :
JMSF042G02+ TGAACAAAAGGCTGGCT
rJMSF042G02- TGAACAAAAGGCTGGCT
rJMFF034J14- TGAACAAAAGGCTGGCTGGTGGTGGTAGCCTGACTAAACCGATCCACATTCACTCCATCC
rJMSF010O21- TGAACAAAAGGCTGGCTGGTGGTGGTAGCCTGACTAAACCGATCCACATTCACTCCATCC
rJMSF039J24- TGAACAAAAGGCTGGCTGGTGGTGGTAGCCTGACTAAACCGATCCACATTCACTCCATCC
____________________________________________________________
consensus TGAACAAAAGGCTGGCTGGTGGTGGTAGCCTGACTAAACCGATCCACATTCACTCCATCC
. : . : . : . : . : . :
rJMFF034J14- CTCAGGCCTCAACCAATAGGATGCCGTCTTCTCTTGGGCCGGCTTCGGTCTTCTTCATAA
rJMSF010O21- CTCAGGCCTCAACCAATAGGATGCCGTCTTCTCTTGGGCCGGCTTCGGTCTTCTTCATAA
rJMSF039J24- CTCAGGCCTCAACCAATAGGATGCCGTCTTCTCTTGGGCCGGCTTCGGTCTTCTTCATAA
____________________________________________________________
consensus CTCAGGCCTCAACCAATAGGATGCCGTCTTCTCTTGGGCCGGCTTCGGTCTTCTTCATAA
. : . : . : . : . : . :
rJMFF034J14- TCCATCACTCCACCAGGTTCAGAGTACATCTCCTCATGCCCTCTGTAGTCGATGTCCGCC
rJMSF010O21- TCCATCACTCCACCAGGTTCAGAGTACATCTCCTCATGCCCTCTGTAGTCGATGTCCGCC
rJMSF039J24- TCCATCACTCCACCAGGTTCAGAGTACATCTCCTCATGCCCTCTGTAGTCGATGTCCGCC
____________________________________________________________
consensus TCCATCACTCCACCAGGTTCAGAGTACATCTCCTCATGCCCTCTGTAGTCGATGTCCGCC
. : . : . : . : . : . :
rJMFF034J14- TGCTTGTTTGTAACTTCTTGAAGGACAAGGACTTCTTTACTTCTTCAACCTTTTCTTCCA
rJMSF010O21- TGCTTGTTTGTAACTTCTTGAAGGACAAGGACTTCTTTACTTCTTCAACCTTTTCTTCCA
rJMSF039J24- TGCTTGTTTGTAAC---TTGAAGGACAAGGACTTCTTTACTTCTTCAACCTTTTCTTCCA
____________________________________________________________
consensus TGCTTGTTTGTAACTTCTTGAAGGACAAGGACTTCTTTACTTCTTCAACCTTTTCTTCCA
. : . : . : . : . : . :
rJMFF034J14- TATCCTTCTTGTGCTTCTTGTCCAACTCACTCATTGTATCTGCCCATTTGATCTTCTCTT
rJMSF010O21- TATCCTTCTTGTGCTTCTTGTCCAACTCACTCATTGTATCTGCCCATTTGATCTTCTCTT
rJMSF039J24- TATCCTTCTTGTGCTTCTTGTCCAACTCACTCATTGTATCTGCCCATTTGATCTTCTCTT
____________________________________________________________
consensus TATCCTTCTTGTGCTTCTTGTCCAACTCACTCATTGTATCTGCCCATTTGATCTTCTCTT
. : . : . : . : . : . :
rJMFF034J14- GAATTGATATGAGAAGATTGTCTGAAGTAGTCAACCAATTAGTTAGTGTATTTATCATAC
rJMSF010O21- GAATTGATATGAGAAGATTGTCTGAAGTAGTCAACCAATTAGTTAGTGTATTTATCATAC
rJMSF039J24- GAATTGATATGAGAAGATTGTCTGAAGTAGTCAACCAATTAGTTAGTGTATTTATCATAC
____________________________________________________________
consensus GAATTGATATGAGAAGATTGTCTGAAGTAGTCAACCAATTAGTTAGTGTATTTATCATAC
. : . : . : . : . : . :
rJMFF034J14- TCCCTAATTGACCAG
rJMSF010O21- TCCCTAATTGACCAGGCCTGAGATCCCTCCCTGCTGCAAATTGCACCTCAAAGCATCTAC
rJMSF039J24- TCCCTAATTGACCAGGCCTGAGATCCCTCCCTGCTGCAAATTGCACCTCAAAGCATCTAC
JMSF039J24+ GCTGCAAATTGCACCTCAAAGCATCTAC
____________________________________________________________
consensus TCCCTAATTGACCAGGCCTGAGATCCCTCCCTGCTGCAAATTGCACCTCAAAGCATCTAC
. : . : . : . : . : . :
rJMSF010O21- GCAACTGGTCCAGCTTTCCCCTAACTATGCCC
rJMSF039J24- GCAACTGGTCCAGCTTTCCCCTAACTATGCCC
JMSF039J24+ GCAACTGGTCCAGCTTTCCCCTAACTATGCCCACATACATACACTCATTGATGAGGAAAT
JMSF023O12+ CAACTGGTCCAGCTTTCCCCTAACTATGCCCACGTACATGCACTCATTTATGAGGAAAT
____________________________________________________________
consensus GCAACTGGTCCAGCTTTCCCCTAACTATGCCCACGTACATGCACTCATTTATGAGGAAAT
. : . : . : . : . : . :
JMSF039J24+ CCTCAAGTTCACGGACATTTGTGATATCCAACTCATGCATAAGTAAATCATATGGCAGCA
JMFF034J14+ ATCCAACTCATGCATAAGTAAATCATATGGCAGCA
JMSF023O12+ CTTCAAGTTCACGCACATTAGAGACATCCAANTCCTGCATAAGTAAATCATATGGCAGCA
____________________________________________________________
consensus CTTCAAGTTCACGGACATTTGTGATATCCAACTCATGCATAAGTAAATCATATGGCAGCA
. : . : . : . : . : . :
JMSF039J24+ CCTTGGTCGTTTCAGCCAGTGTAAGCACAGTTAGTTGCTTCAACTTGAGCACTTGATCAG
JMFF034J14+ CCTTGGTCGTTTCAGCCAGTGTAAGCACAGTTAGTTGCTTCAACTTGAGCACTTGATCAG
JMSF023O12+ CCTTGGTCGTCTCAGCCAGTGTAAGCACAGTAAGTTGCTTCAACTTCAGAACTTGGTCAG
____________________________________________________________
consensus CCTTGGTCGTTTCAGCCAGTGTAAGCACAGTTAGTTGCTTCAACTTGAGCACTTGATCAG
. : . : . : . : . : . :
JMSF039J24+ GTCCCAATTGAGGAAGCCTTCCAGCAATACTTTTATACTCAGTCCATGTTCCATGAGCAA
JMFF034J14+ GTCCCAATTGAGGAAGCCTTCCAGCAATACTTTTATACTCAGTCCATGTTCCATGAGCAA
JMSF023O12+ GGACCAATTGAGGAAGGTTTCCAGTAAAATTCTTGTACTGAGTCCATGTTCCTTGAGCAA
____________________________________________________________
consensus GTCCCAATTGAGGAAGCCTTCCAGCAATACTTTTATACTCAGTCCATGTTCCATGAGCAA
. : . : . : . : . : . :
JMSF039J24+ ACATCCTAAGCAAGTCGAGGTAAATAGAATTCTCAGTTCCTTCGAGCTCTAGAACGTTGG
JMFF034J14+ ACATCCTAAGCAAGTCGAGGTAAATAGAATTCTCAGTTCCTTCGAGCTCTAGAACGTTGG
JMSF023O12+ ACAAACGAAGCAAATAAAGGTACATAGAATTCTCAGTTCCTTCAAGCTCTAGAATGTTGG
____________________________________________________________
consensus ACATCCTAAGCAAGTCGAGGTAAATAGAATTCTCAGTTCCTTCGAGCTCTAGAACGTTGG
. : . : . : . : . : . :
JMSF039J24+ GAACGGAGAGAATCTCGGAGAAAGCGAAAAGAGAGGGATGAGAAGTGGCCTCGACGACGA
JMFF034J14+ GAACGGAGAGAATCTCGGAGAAAGCGAAAAGAGAGGGATGAGAAGTGGCCTCGACGACGA
JMSF023O12+ GAACCGCAAGAATCTCGGAGAAGGCGAAGAGGGAGGGGTGGGAGGTGGCGTCGACGATGA
____________________________________________________________
consensus GAACGGAGAGAATCTCGGAGAAAGCGAAAAGAGAGGGATGAGAAGTGGCCTCGACGACGA
. : . : . : . : . : . :
JMSF039J24+ CGGTGGTGGATAAGGCGGAACCTTTGAGGGCTGACGCTTGCTTCACGAAGTACTCTATAT
JMFF034J14+ CGGTGGTGGATAAGGCGGAACCTTTGAGGGCTGACGCTTGCTTCACGAAGTACTCTATAT
JMSF023O12+ CAGTGGT---CAAGGCGGAACCTCTGACAGCCGACGCTTGTTTCACGAAGTACTCGATGT
____________________________________________________________
consensus CGGTGGTGGATAAGGCGGAACCTTTGAGGGCTGACGCTTGCTTCACGAAGTACTCTATAT
. : . : . : . : . : . :
JMSF039J24+ GCTCCGCTTGCCTTTCTTCAATATCCATCTTCCAATT
JMFF034J14+ GCTCCGCTTGCCTTTCTTCAATATCCATCTTCCAATT
JMSF023O12+ GCTCCGCTTGCCTTTGTTCAATATCCATCTTCCAATTCCAACGAAAATATAAATAAATTA
____________________________________________________________
consensus GCTCCGCTTGCCTTTCTTCAATATCCATCTTCCAATTCCAACGAAAATATAAATAAATTA
. : . : . : . : . : . :
JMSF023O12+ ACTTCTATCAAATATATCTGTAGAAACTGTTTACCGATGTGAAGGGTCCGGTACCATTGA
____________________________________________________________
consensus ACTTCTATCAAATATATCTGTAGAAACTGTTTACCGATGTGAAGGGTCCGGTACCATTGA
. : . : . : . : . : . :
JMSF023O12+ CGGAGGAATTAGGGCTGCTGAATTGAAGGTTTTCTTAGGGTTTATAAATACGCGAGAGGA
____________________________________________________________
consensus CGGAGGAATTAGGGCTGCTGAATTGAAGGTTTTCTTAGGGTTTATAAATACGCGAGAGGA
. : . : . : . : . : . :
JMSF023O12+ CTCTGCAAATTCGAGTCCTTCGGGATGGTGTTGGAGACGCAGTAAAAATGCTTTTCTTCC
____________________________________________________________
consensus CTCTGCAAATTCGAGTCCTTCGGGATGGTGTTGGAGACGCAGTAAAAATGCTTTTCTTCC