Contig 012016:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043H01-                                     CCTTATGGCGGATCACCCTGGAGAGTTTTTTTT
                      ____________________________________________________________
consensus                                        CCTTATGGCGGATCACCCTGGAGAGTTTTTTTT
 
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rJMFF043H01-          TTTTTTTTGTGCATCAAAAAGTTGTACAGATTAAAGAGAAAACATTAACACAAGTGTGAT
rJMSF023O01-               TTTGTGCATCAAAAAGTTGTACAGATTAAAGAGAAAACATTAACACAAGTGTGAT
                      ____________________________________________________________
consensus             TTTTTTTTGTGCATCAAAAAGTTGTACAGATTAAAGAGAAAACATTAACACAAGTGTGAT
 
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rJMFF043H01-          GTTGAATGAGATTCAAGCATCATTTACAATATAACACATTATTATTACCAAACTTTGATT
rJMSF023O01-          GTTGAATGAGATTCAAGCATCATTTACAATATAACACATTATTATTACCAAACTTTGATT
                      ____________________________________________________________
consensus             GTTGAATGAGATTCAAGCATCATTTACAATATAACACATTATTATTACCAAACTTTGATT
 
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rJMFF043H01-          TATTACCACCAAAAAAAGGGAAAGTTTGCTAGTCTCTATTCCCCCTCAACAACTGTTGTG
rJMSF023O01-          TATTACCACCAAAAAAAGGGAAAGTTTGCTAGTCTCTATTCCCCCTCAACAACTGTTGTG
                      ____________________________________________________________
consensus             TATTACCACCAAAAAAAGGGAAAGTTTGCTAGTCTCTATTCCCCCTCAACAACTGTTGTG
 
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rJMFF043H01-          CCTGCCCAGTTTGATGCACTTCCTCTCCGCGGAATGCTATGGAGTCTGGTGTAAAAATCG
rJMSF023O01-          CCTGCCCAGTTTGATGCACTTCCTCTCCGCGGAATGCTATGGAGTCTGGTGTAAAAATCG
                      ____________________________________________________________
consensus             CCTGCCCAGTTTGATGCACTTCCTCTCCGCGGAATGCTATGGAGTCTGGTGTAAAAATCG
 
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rJMFF043H01-          ACTTGGAAAATAATCGCATTCACATTACTGCCATCATCGTCCTCGCGAATCATCGCTTTT
rJMSF023O01-          ACTTGGAAAATAATCGCATTCACATTACTGCCATCATCGTCCTCGCGAATCATCGCTTTT
                      ____________________________________________________________
consensus             ACTTGGAAAATAATCGCATTCACATTACTGCCATCATCGTCCTCGCGAATCATCGCTTTT
 
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rJMFF043H01-          ACCTTGTGAAGTGGATGATCAAAGCTGGTTAGCCCACTCTCACTCAAGAAAATGCAACCT
rJMSF023O01-          ACCTTGTGAAGTGGATGATCAAAGCTGGTTAGCCCACTCTCACTCAAGAAAATGCAACCT
JMFF043H01+                         ATGATCAAAGCTGGTTAGCCCACTCTCACTCAAGAAAATGCAACCT
JMSF023O01+                                                      TCAAGAAAATGCAACCT
                      ____________________________________________________________
consensus             ACCTTGTGAAGTGGATGATCAAAGCTGGTTAGCCCACTCTCACTCAAGAAAATGCAACCT
 
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rJMFF043H01-          GGAGGAAACGGCGTGTAACATTTCCCAGATGCAGCTTTGATGAGCTCTGCATCAGAACAA
rJMSF023O01-          GGAGGAAACGGCGTGTAACATTTCCCAGATGCAGCTTTGATGAGCTCTGCATCAGAACAA
JMFF043H01+           GGAGGAAACGGCGTGTAACATTTCCCAGATGCAGCTNTGATGAGCTCTGCATCAGAACAA
JMSF023O01+           GGAGGAAACGGCGTGTAACATTTCCCAGATGCAGCTTTGATGAGCTCTGCATCAGAACAA
                      ____________________________________________________________
consensus             GGAGGAAACGGCGTGTAACATTTCCCAGATGCAGCTTTGATGAGCTCTGCATCAGAACAA
 
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rJMFF043H01-          CATATCAATGATCCATCACCAGTGGCTCCCCAGTGCAGTGCCACACTTCCTTCGCGATCC
rJMSF023O01-          CATATCAATGATCCATCACCAGTGGCTCCCCAGTGCAGTGCCACACTTCCTTCGCGATCC
JMFF043H01+           CATATCAATGATCCATCACCAGTGGCTCCCCAGTGCAGTGCCACACTTCCTTCGCGATCC
JMSF023O01+           CATATCAATGATCCATCACCAGTGGCTCCCCAGTGCAGTGCCACACTTCCTTCGCGATCC
                      ____________________________________________________________
consensus             CATATCAATGATCCATCACCAGTGGCTCCCCAGTGCAGTGCCACACTTCCTTCGCGATCC
 
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rJMFF043H01-          CTGGCTAGAANAAGAGTAGAATCTTTAGAATCAAAGAGGATAAAAGCAAATTTCCCTTGC
rJMSF023O01-          CTGGCTAGAAAAAGAGTAGAATCTTTAGAATCAAAGAGGATAAAAGCAATTTTCCCTTGC
JMFF043H01+           CTGGCTAGAAAAAGAGTAGAATCTTTAGAATCAAAGAGGATAAAAGCAAATTTCCCTTGC
JMSF023O01+           CTGGCTAGAAAAAGAGTAGAATCTTTAGAATCAAAGAGGATAAAAGCAATTTTCCCTTGC
                      ____________________________________________________________
consensus             CTGGCTAGAAAAAGAGTAGAATCTTTAGAATCAAAGAGGATAAAAGCAATTTTCCCTTGC
 
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rJMFF043H01-          AGCTCCTTGATGACCTGATCAGGAGGATATGGCGCGCGGTCCCTTAACACCTTATAAGCC
rJMSF023O01-          AGCTCCTTGATGACCTGATCAGGAGGATATGGCGCGCGGTCCCTTAACACCTTATAAGCC
JMFF043H01+           AGCTCCTTGATGACCTGATCAGGAGGATATGGCGCGCGGTCCCTTAACACCTTATAAGCC
JMSF023O01+           AGCTCCTTGATGACCTGATCAGGAGGATATGGCGCGCGGTCCCTTAACACCTTATAAGCC
                      ____________________________________________________________
consensus             AGCTCCTTGATGACCTGATCAGGAGGATATGGCGCGCGGTCCCTTAACACCTTATAAGCC
 
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rJMFF043H01-          TCCACCATGATCAT                                              
rJMSF023O01-          TCCACCATGATCATAGCTTCTGTGGCCTGTCTTGACAGACCATAGTATTTCCTCAAGTCA
JMFF043H01+           TCCACCATGATCATAGCTTCTGTGGCCTGTCTTGACAGACCATAGTATTTCCTCAAGTCA
JMSF023O01+           TCCACCATGATCATAGCTTCTGTGGCCTGTCTTGACAGACCATAGTATTTCCTCAAGTCA
                      ____________________________________________________________
consensus             TCCACCATGATCATAGCTTCTGTGGCCTGTCTTGACAGACCATAGTATTTCCTCAAGTCA
 
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rJMSF023O01-          GAGGTATTATCTAGAGCTCCAGAAAATATGCAGAATATATCCTCCATCACAGTCACAGAC
JMFF043H01+           GAGGTATTATCTAGAGCTCCAGAAAATATGCAGAATATATCCTCCATCACAGTCACAGAC
JMSF023O01+           GAGGTATTATCTAGAGCTCCAGAAAATATGCAGAATATATCCTCCATCACAGTCACAGAC
                      ____________________________________________________________
consensus             GAGGTATTATCTAGAGCTCCAGAAAATATGCAGAATATATCCTCCATCACAGTCACAGAC
 
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rJMSF023O01-          CTAGGA                                                      
JMFF043H01+           CTAGGATGAGATGGGGTTTCACCACCTACCCCCAAGAAGTTCCCATTAGGAAGTCTGTAC
JMSF023O01+           CTAGGATGAGATGGGGTTTCACCACCTACCCCCAAGAAGTTCCCATTAGGAAGTCTGTAC
                      ____________________________________________________________
consensus             CTAGGATGAGATGGGGTTTCACCACCTACCCCCAAGAAGTTCCCATTAGGAAGTCTGTAC
 
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JMFF043H01+           AAAGTTGAGTCCCCTGGCTTCTGTGACCGGAAAATCTCGGCGATTTCTTGCCGGGTTTTC
JMSF023O01+           AAAGTTGAGTCCCCTGGCTTCTGTGACCGGAAAATCTCGGCGATTTCTTGCCGGGTTTTC
                      ____________________________________________________________
consensus             AAAGTTGAGTCCCCTGGCTTCTGTGACCGGAAAATCTCGGCGATTTCTTGCCGGGTTTTC
 
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JMFF043H01+           TTGTCAGGCTGCCCGGCCAAAGGAAGGCTGAGCTCCGGTGGTGGCTTGGCAATGGATTGC
JMSF023O01+           TTGTCAGGCTGCCCGGCCAAAGGAAGGCTGAGCTCCGGTGGTGGCTTGGCAATGGATTGC
                      ____________________________________________________________
consensus             TTGTCAGGCTGCCCGGCCAAAGGAAGGCTGAGCTCCGGTGGTGGCTTGGCAATGGATTGC
 
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JMFF043H01+           TCAAAAATAGCCAACATTTTCTTCAAGATTCCAGAGTGAGAATAC               
JMSF023O01+           TCAAAAATAGCCAACATTTTCTTCAAGATTCCAGAGTGAGAATACAGAGAGTCAGTCCAA
                      ____________________________________________________________
consensus             TCAAAAATAGCCAACATTTTCTTCAAGATTCCAGAGTGAGAATACAGAGAGTCAGTCCAA
 
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JMSF023O01+           CTGCAGCTACATATATGCTATTTATCTATGAATATAATGAAGAATTAATGCTTATCCGTC
                      ____________________________________________________________
consensus             CTGCAGCTACATATATGCTATTTATCTATGAATATAATGAAGAATTAATGCTTATCCGTC