Contig 012015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023M14Sequence644012015 (2)ref|XP_011084903.1|1e-93PREDICTED: protein SRG1-like [Sesamum indicum]729012015 (2)ref|XP_009595967.1|6e-115PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like [Nicotiana tomentos

Alignment

This contig is upended


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rJMSF023M14-                               TATATATTTTTGTTAACATATATATAAGGCTACAAGATT
                      ____________________________________________________________
consensus                                  TATATATTTTTGTTAACATATATATAAGGCTACAAGATT
 
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rJMSF023M14-          TACAATCAATTGGAATGAGCATTGAGCAATACATAATAATTATTTAACGCTAATTAATGA
                      ____________________________________________________________
consensus             TACAATCAATTGGAATGAGCATTGAGCAATACATAATAATTATTTAACGCTAATTAATGA
 
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rJMSF023M14-          CACTAAGTATATATACTTATGTGTATTATCTTGGCGATTTTGTAGACTGCCCTATCTGTG
                      ____________________________________________________________
consensus             CACTAAGTATATATACTTATGTGTATTATCTTGGCGATTTTGTAGACTGCCCTATCTGTG
 
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rJMSF023M14-          ATTTTCCCCTAGGACCCTTCGTCCTTATGTAAAGTCTATACTCGTTAAACGTCATCGCCG
                      ____________________________________________________________
consensus             ATTTTCCCCTAGGACCCTTCGTCCTTATGTAAAGTCTATACTCGTTAAACGTCATCGCCG
 
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rJMSF023M14-          GATATAATGGTGGATTTTCCGGTGTGATGAGCTCCTTCATTGGTTGTACAAGTAACTCTC
                      ____________________________________________________________
consensus             GATATAATGGTGGATTTTCCGGTGTGATGAGCTCCTTCATTGGTTGTACAAGTAACTCTC
 
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rJMSF023M14-          CCCTTGGATTGTAAAAATATGCCAAGGATACACGCTCTTCATTTGAGTTAACAATCACTC
                      ____________________________________________________________
consensus             CCCTTGGATTGTAAAAATATGCCAAGGATACACGCTCTTCATTTGAGTTAACAATCACTC
 
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rJMSF023M14-          TGTGCTCAACGCTTTTGTACACTGCATTGCTTAGTACCTGAATTTGATCCCCAATATTGA
                      ____________________________________________________________
consensus             TGTGCTCAACGCTTTTGTACACTGCATTGCTTAGTACCTGAATTTGATCCCCAATATTGA
 
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rJMSF023M14-          CGATGAAAGCATGCTGGGCCGGTTTAACGGTGATCCACTGGTCGTTCCGGCGGACTTGGA
                      ____________________________________________________________
consensus             CGATGAAAGCATGCTGGGCCGGTTTAACGGTGATCCACTGGTCGTTCCGGCGGACTTGGA
 
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rJMSF023M14-          GGCCGGCGACGTGCTGGTCCGGCAAGAGGATGGTCAAGCCGCCGGGGTCGGAATGAGAGG
                      ____________________________________________________________
consensus             GGCCGGCGACGTGCTGGTCCGGCAAGAGGATGGTCAAGCCGCCGGGGTCGGAATGAGAGG
 
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rJMSF023M14-          AGAGTCCGAGGGTGAGGTCCGGTTGGGGACATTTTGGGTAAAAATTTATTCTTAAACAAG
                      ____________________________________________________________
consensus             AGAGTCCGAGGGTGAGGTCCGGTTGGGGACATTTTGGGTAAAAATTTATTCTTAAACAAG
 
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rJMSF023M14-          CTCCAATGTCTTCCCCTCCAAACGCCTTTTGCAGACAACTTTCGTGTAGTCCGAGGTTAA
                      ____________________________________________________________
consensus             CTCCAATGTCTTCCCCTCCAAACGCCTTTTGCAGACAACTTTCGTGTAGTCCGAGGTTAA
 
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rJMSF023M14-          TCGACAAAATCTTCATTAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
JMSF023M14+                           TAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
                      ____________________________________________________________
consensus             TCGACAAAATCTTCATTAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
 
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rJMSF023M14-          TCACTTCCCTTAAAGAAGATGGAAAGGCGG                              
JMSF023M14+           TCACTTCCCTTAAAGAAGATGGAAAGGCGGGCCATTTGTTATGGTCCTTCAAAGAAGAAG
                      ____________________________________________________________
consensus             TCACTTCCCTTAAAGAAGATGGAAAGGCGGGCCATTTGTTATGGTCCTTCAAAGAAGAAG
 
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JMSF023M14+           GGAGATAGTGAAGGAAATAGTAATCACTCCAATCAAGAATGGCGCCTTTCTCGACGCCCA
                      ____________________________________________________________
consensus             GGAGATAGTGAAGGAAATAGTAATCACTCCAATCAAGAATGGCGCCTTTCTCGACGCCCA
 
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JMSF023M14+           ACCGGCTGCCGTAACCCTCGTAAGTGGTCGGAGAATTAGCGTACGCGGTTTTCACATCCA
                      ____________________________________________________________
consensus             ACCGGCTGCCGTAACCCTCGTAAGTGGTCGGAGAATTAGCGTACGCGGTTTTCACATCCA
 
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JMSF023M14+           TGGGTTGGTGGAAGAATTCGCGCCAGACCTCCCTGGCTTGGTCCATCAACTCCGGCCGGA
                      ____________________________________________________________
consensus             TGGGTTGGTGGAAGAATTCGCGCCAGACCTCCCTGGCTTGGTCCATCAACTCCGGCCGGA
 
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JMSF023M14+           CTCCGTGGTTCACCACCTGGAAAAACCCCCAGCTCCGGCAAGCCTCGGAGACCTGCTCCA
                      ____________________________________________________________
consensus             CTCCGTGGTTCACCACCTGGAAAAACCCCCAGCTCCGGCAAGCCTCGGAGACCTGCTCCA
 
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JMSF023M14+           GGACGGCGGGGTTTACGTCGCCGTCGCCGTCGAGAAACTGCTGGAAGTCGATTAACGGGA
                      ____________________________________________________________
consensus             GGACGGCGGGGTTTACGTCGCCGTCGCCGTCGAGAAACTGCTGGAAGTCGATTAACGGGA
 
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JMSF023M14+           TGTTGACGTCGGCGGCGGCGGCGGCGGTTAACGACGGCCGGTCTGTTGGCGGCTTGACGT
                      ____________________________________________________________
consensus             TGTTGACGTCGGCGGCGGCGGCGGCGGTTAACGACGGCCGGTCTGTTGGCGGCTTGACGT
 
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JMSF023M14+           ACCTGTCGGGGATGGTGCCCAGACCGCTGTCGGACAGCGATTGGACGCGGACGATTGGCT
                      ____________________________________________________________
consensus             ACCTGTCGGGGATGGTGCCCAGACCGCTGTCGGACAGCGATTGGACGCGGACGATTGGCT
 
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JMSF023M14+           CGGGCCAATCTCGCGGGCAGTTCATGTCGGAACCAACGGATTTACGTCGTCGTCGTCGCT
                      ____________________________________________________________
consensus             CGGGCCAATCTCGCGGGCAGTTCATGTCGGAACCAACGGATTTACGTCGTCGTCGTCGCT
 
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JMSF023M14+           AAAATCAAGTACGATCGATGGTGACTATTGGGTGGTTAGTTGGGTCTTGAATTTGCTAGC
                      ____________________________________________________________
consensus             AAAATCAAGTACGATCGATGGTGACTATTGGGTGGTTAGTTGGGTCTTGAATTTGCTAGC