Contig 012011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051E22Sequence524012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]553007005 (3)ref|XP_004299880.1|4e-26PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Fragaria
JMFS059B07Sequence614012011 (6)ref|XP_009781014.1|209PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]
JMFS082E10Sequence607012011 (6)ref|XP_009781014.1|212PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]
JMFS101D06Sequence579012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]
JMFS158E05Sequence514012011 (6)ref|XP_009781014.1|208PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]
JMSF023I07Sequence689012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]737007005 (3)ref|XP_009781014.1|402PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS082E10+ CAAATTGGGGTTGATTTCTTGGAGTG
                      ____________________________________________________________
consensus CAAATTGGGGTTGATTTCTTGGAGTG
 
. : . : . : . : . : . :
JMFF051E22+ TCCCGGTATTCAATGGCA
JMFS082E10+ GGAAAGGTGGAGGGGCGGGGGTTTCTCTAGGGTCAGCGCCACTCCCGGTATTCAATGGCA
JMFS101D06+ CAATGGCA
JMSF023I07+ GTCAGCGCCACTCCCGGTATTCAATGGCA
                      ____________________________________________________________
consensus GGAAAGGTGGAGGGGCGGGGGTTTCTCTAGGGTCAGCGCCACTCCCGGTATTCAATGGCA
 
. : . : . : . : . : . :
JMFF051E22+ CCTCGGGTATAAAATCTT-GGGCACCGGCGGCGGCGGCGCCGGAGCGGGATTGGGATTAC
JMFS082E10+ CCTCGGGTATAAAATCTTGGGGCACCGGCGGCGGCGGCGCCGGAGCGGGATTGGGATTAC
JMFS059B07+ GGCGCCGGAGCGGGATTGGGATTAC
JMFS158E05+ ATTAC
JMFS101D06+ CCTCGGGTATAAAATCTTGGGGCACCGGCGNCGGCGGCGCCGGAGCGGGATTGGGATTAC
JMSF023I07+ CCTCGGGTATAAAATCTTGGGGCACCGGCGGCGGCGGCGCCGGAGCGGGATTGGGATTAC
                      ____________________________________________________________
consensus CCTCGGGTATAAAATCTTGGGGCACCGGCGGCGGCGGCGCCGGAGCGGGATTGGGATTAC
 
. : . : . : . : . : . :
JMFF051E22+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
JMFS082E10+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
JMFS059B07+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
JMFS158E05+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
JMFS101D06+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
JMSF023I07+ CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
                      ____________________________________________________________
consensus CCAGACCCGGCAAAGAGTAGAGTTTCAACGCAATATCGCCCTTAATATGTGAAAACAACC
 
. : . : . : . : . : . :
JMFF051E22+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
JMFS082E10+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
JMFS059B07+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
JMFS158E05+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
JMFS101D06+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
JMSF023I07+ CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
                      ____________________________________________________________
consensus CCCTTTTATCAAGCGGGTATCTCTGAATTTCCGCTTCCGACTCGGAAAACGGAACAGAAA
 
. : . : . : . : . : . :
JMFF051E22+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
JMFS082E10+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
JMFS059B07+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
JMFS158E05+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
JMFS101D06+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
JMSF023I07+ GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
                      ____________________________________________________________
consensus GCCCAGAAAGCTTGACTCTCCCAAGAAACTTGCTATGGTGGCCATGTTTCCCCTCGCTAT
 
. : . : . : . : . : . :
JMFF051E22+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
JMFS082E10+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
JMFS059B07+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
JMFS158E05+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
JMFS101D06+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
JMSF023I07+ AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
                      ____________________________________________________________
consensus AAACAGTGACATCAATGGTCCTGGCGGGCAGGTCGCCGGGATCAGTAACGTTGAAAACCA
 
. : . : . : . : . : . :
JMFF051E22+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
JMFS082E10+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
JMFS059B07+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
JMFS158E05+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
JMFS101D06+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
JMSF023I07+ GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
                      ____________________________________________________________
consensus GCTTCTCGTTCCACTGCGGGTAGAGATCCTTGTTCTTGGTCTGGGTCCTCTGGCGCTGCC
 
. : . : . : . : . : . :
JMFF051E22+ CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
JMFS082E10+ CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
JMFS059B07+ CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
JMFS158E05+ CATCAAAGCTCACCTCCACAAAGGGACCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
JMFS101D06+ CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
JMSF023I07+ CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
                      ____________________________________________________________
consensus CATCAAAGCTCACCTCCACAAAGGGATCCGCCGAGCCCTGCCCATCCTTGGGCATAAGAT
 
. : . : . : . : . : . :
JMFF051E22+ CACTCGCATCCAGCACCTCAACTACAATCCTCGCCATCAAAAACTCAACTACTGTGCGCA
JMFS082E10+ CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
JMFS059B07+ CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
JMFS158E05+ CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
JMFS101D06+ CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
JMSF023I07+ CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
                      ____________________________________________________________
consensus CACTCGCATCCAGCACCTCAACTACAAGCCTCGCCATCAAAAACTCAACTACTGTGCGCA
 
. : . : . : . : . : . :
JMFF051E22+ CGAAACGTAACGTACGGTGGCGCCGCG
JMFS082E10+ CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGG
JMFS059B07+ CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGGCTATGGTGATTATGTGGGT
JMFS158E05+ CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGGCTATGGTGATTATATGGGT
JMFS101D06+ CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGGCTATGGTGATTATATGGGT
JMSF023I07+ CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGGCTATGGTGATTATATGGGT
                      ____________________________________________________________
consensus CGAAACGTAACGTACGGTGGCGCCGCGGCGGTGTTAGGTGGCTATGGTGATTATATGGGT
 
. : . : . : . : . : . :
JMFS059B07+ TATGGGTATGGATGTGTCTACTTTTGTTTTAGAAAGAAACTGAATTGGGGAATGGTCCCC
JMFS158E05+ TATGGGTATGGATGTGTCTACTTTTGTTT
JMFS101D06+ TATGGGTATGGATGTGTCTACTTTTGTTT
JMSF023I07+ TATGGGTATGGATGTGTCTACTTTTGTTTTAGAAAGAAACTGAATTGGGGAATGGTCCCC
                      ____________________________________________________________
consensus TATGGGTATGGATGTGTCTACTTTTGTTTTAGAAAGAAACTGAATTGGGGAATGGTCCCC
 
. : . : . : . : . : . :
JMFS059B07+ CGCAATATTCCGGTCGTATATCTCTTTGATTCTGTTGAGGAAAGAGGAA
JMSF023I07+ CGCAATATTCCGGTCGTATATCTCTTTGATTCTGTTGAGGAAAGAGGAAAGAGTAATTCC
                      ____________________________________________________________
consensus CGCAATATTCCGGTCGTATATCTCTTTGATTCTGTTGAGGAAAGAGGAAAGAGTAATTCC