| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005L14 | Sequence | 559 | 012007 (5) | ref|XP_009776620.1| | 7e-99 | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A | 759 | 009969 (7) | ref|XP_010094777.1| | 8e-120 | hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p |
| JMFF010O07 | Sequence | 561 | 012007 (5) | ref|XP_009776620.1| | 7e-99 | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A | 767 | 009969 (7) | ref|XP_010094777.1| | 3e-120 | hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p |
| JMFF017K22 | Sequence | 543 | 012007 (5) | emb|CDY03849.1| | 2e-58 | BnaC07g10740D [Brassica napus] | 774 | 009969 (7) | ref|XP_010094777.1| | 3e-120 | hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p |
| JMSF014E05 | Sequence | 472 | 012007 (5) | ref|XP_009776620.1| | 2e-89 | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A | 788 | 009969 (7) | ref|XP_010094777.1| | 3e-122 | hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p |
| JMSF023C01 | Sequence | 690 | 012007 (5) | ref|XP_009776620.1| | 5e-118 | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A | 791 | 009969 (7) | ref|XP_010094777.1| | 5e-119 | hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p |
This contig is upended
. : . : . : . : . : . :
JMSF023C01+ TNGCAGCTGCTCTCCTCACCATAGGCATGTC
____________________________________________________________
consensus TNGCAGCTGCTCTCCTCACCATAGGCATGTC
. : . : . : . : . : . :
JMFF005L14+ GCACT
JMFF017K22+ GCACT
JMSF014E05+ T
JMFF010O07+ GCACT
JMSF023C01+ ATCTTGGCACAATNGGCTATATATAGTTCTAAGTTCAGTTTTTAATGGCTCTGGGGCACT
____________________________________________________________
consensus ATCTTGGCACAATNGGCTATATATAGTTCTAAGTTCAGTTTTTAATGGCTCTGGGGCACT
. : . : . : . : . : . :
JMFF005L14+ GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTCTCCGGC
JMFF017K22+ GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTCTCCGGC
JMSF014E05+ GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTNTCCGGC
JMFF010O07+ GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTCTCCGGC
JMSF023C01+ GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTCTCCGGC
____________________________________________________________
consensus GGGATAAGCAATGTGAAATAATCCACATGATGATACACGAGCAGTAAACCACTCTCCGGC
. : . : . : . : . : . :
JMFF005L14+ TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTCTACCAAGTCTGATTCCTTCATTTGAGA
JMFF017K22+ TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTCTACCAAGTCTGATTCCTTCATTTGAGA
JMSF014E05+ TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTNTACCAAGTCTGATTCNTTCATTTGAGA
JMFF010O07+ TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTCTACCAAGTCTGATTCCTTCATTTGAGA
JMSF023C01+ TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTCTACCAAGTCTGATTCCTTCATTTGAGA
____________________________________________________________
consensus TGCCAGCCTCTTTGCAAGAGGAATAAATGCTTCTACCAAGTCTGATTCCTTCATTTGAGA
. : . : . : . : . : . :
JMFF005L14+ CCCAATTCTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTCTCTTCAACACTGCA
JMFF017K22+ CCCAATTCTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTCTCTTCAACACTGCA
JMSF014E05+ CCCAATTNTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTNTCTTCAACACTGCA
JMFF010O07+ CCCAATTCTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTCTCTTCAACACTGCA
JMSF023C01+ CCCAATTCTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTCTCTTCAACACTGCA
____________________________________________________________
consensus CCCAATTCTGCACAATGACTCAACAGCTTTTTCCCTGACACAAGTCTCTTCAACACTGCA
. : . : . : . : . : . :
JMFF005L14+ GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAACTCCGCCAACATATGGAAT
JMFF017K22+ GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAACTCCGCCAACATATGGAAT
JMSF014E05+ GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAANTCCGCCAACATATGGAAT
JMFF010O07+ GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAACTCCGCCAACATATGGAAT
JMSF023C01+ GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAACTCCGCCAACATATGGAAT
____________________________________________________________
consensus GAGACCTTCCAGTGGAGGAAGCAAAACACTAGCATGATCAACTCCGCCAACATATGGAAT
. : . : . : . : . : . :
JMFF005L14+ GAAAACTCCCAATTCTTCTGCCATTGCAAGAAG-CACTTCATCATCATCATCATTGTTCT
JMFF017K22+ GAAAACTCCCAATTCTTCTGCCATTGCAAGAAGCCACTTCATCATCATCATCATTGTTCT
JMSF014E05+ GAAAACTCCCAATTCTTCTGCCATTGCAAGAAG-CACTTCATCATCATCATCATTGTTNT
JMFF010O07+ GAAAACTCCCAATTCTTCTGCCATTGCAAGAAG-CACTTCATCATCATCATCATTGTTCT
JMSF023C01+ GAAAACTCCCAATTCTTCTGCCATTGCAAGAAG-CACTTCATCATCATCATCATTGTTCT
____________________________________________________________
consensus GAAAACTCCCAATTCTTCTGCCATTGCAAGAAG-CACTTCATCATCATCATCATTGTTCT
. : . : . : . : . : . :
JMFF005L14+ CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
JMFF017K22+ CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
JMSF014E05+ CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
JMFF010O07+ CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
JMSF023C01+ CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
____________________________________________________________
consensus CACTCAAAAAAGGAATTAATTCCTTCCGAGTTCTCTCCTCCCCAAGTGCCCGAGCAATTG
. : . : . : . : . : . :
JMFF005L14+ TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTCTTCAGCTCATCAA
JMFF017K22+ TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTCTTCAGCTCATCAA
JMSF014E05+ TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTNTTCAGCTCATCAA
JMFF010O07+ TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTCTTCAGCTCATCAA
JMSF023C01+ TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTCTTCAGCTCATCAA
____________________________________________________________
consensus TTGACAGACGGCGGATTGAGTTCAAACGAAGCTGAATGTCTTCATTCTTCAGCTCATCAA
. : . : . : . : . : . :
JMFF005L14+ TTAGAACCGCAATGGGATACAAGGGCTCTTCCATGATTGAAAGGTAACTTCACAGTGTCT
JMFF017K22+ TTAGAACCGCAATGGGATACAAGGGCTCTTCCATGATTGAAAGGTAACTTCACAGTGTCT
JMSF014E05+ TTAGAACCGCAATGGGATACAAGGGCTNTTCCATGATTGAAAGGTAACTTCA
JMFF010O07+ TTAGAACCGCAATGGGATACAAGGGCTCTTCCATGATTGAAAGGTAACTTCACAGTGTCT
JMSF023C01+ TTAGAACCGCAATGGGATACAAGGGCTCTTCCATGATTGAAAGGTAACTTCACAGTGTCT
____________________________________________________________
consensus TTAGAACCGCAATGGGATACAAGGGCTCTTCCATGATTGAAAGGTAACTTCACAGTGTCT
. : . : . : . : . : . :
JMFF005L14+ TTGTGGTTTATTTGCCTGTATATATGTTCACTGGAAACTATGAGATGAACGATGATGTCG
JMFF017K22+ TTGTGGTTTATTTGCCTG
JMFF010O07+ TTGTGGTTTATTTGCCTGTATATATGTTCACTGGAAACTATGAGATGAACGATGATGTCG
JMSF023C01+ TTGTGGTTTATTTGCCTGTATATATGTTCACTGGAAACTATGAGATGAACGATGATGTCG
____________________________________________________________
consensus TTGTGGTTTATTTGCCTGTATATATGTTCACTGGAAACTATGAGATGAACGATGATGTCG
. : . : . : . : . : . :
JMFF005L14+ ATCTGAGCCTT
JMFF010O07+ ATCTGAGCCTT
JMSF023C01+ ATCTGAGCCTTACAGGATAGTGAGTATAGAGAGATCTGCTTATATCATTTCTGTTTCTTC
____________________________________________________________
consensus ATCTGAGCCTTACAGGATAGTGAGTATAGAGAGATCTGCTTATATCATTTCTGTTTCTTC