Contig 012006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041O24Sequence630012006 (2)emb|CDP09525.1|1e-51unnamed protein product [Coffea canephora]512009769 (2)ref|XP_011078962.1|62.0PREDICTED: uncharacterized protein LOC105162592 [Sesamum indicum] ref|XP_0110789
JMSF022O11Sequence694012006 (2)ref|XP_011078962.1|184PREDICTED: uncharacterized protein LOC105162592 [Sesamum indicum] ref|XP_0110789769009769 (2)ref|XP_006351277.1|2e-71PREDICTED: uncharacterized protein LOC102601506 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF022O11+                                     GATCCAGTATTTTCAGTTGTTGTGCATGTTGNAT
                      ____________________________________________________________
consensus                                       GATCCAGTATTTTCAGTTGTTGTGCATGTTGNAT
 
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JMFF041O24+                                CTGATCCATTATGCAAGGTAATGGAACTCACTCCAGTTG
JMSF022O11+           TCTCGTGCAATGGCCGCATCTCTGATCCATTATGCAAGGTAATGGAACTCACTCCAGTTG
                      ____________________________________________________________
consensus             TCTCGTGCAATGGCCGCATCTCTGATCCATTATGCAAGGTAATGGAACTCACTCCAGTTG
 
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JMFF041O24+           GACAAATCTGACGAATTAGCTCAACATGCCTCTCAAGTAACTTGTTGAATCTCTGTATTT
JMSF022O11+           GACAAATCTGACGAATTAGCTCAACATGCCTCTCAAGTAACTTGTTGAATCTCTGTATTT
                      ____________________________________________________________
consensus             GACAAATCTGACGAATTAGCTCAACATGCCTCTCAAGTAACTTGTTGAATCTCTGTATTT
 
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JMFF041O24+           GGTCCTTCACTATCAACCTCAAATGATATGCTCTGAAGAATTCCTGATTTTCTTCTTCAA
JMSF022O11+           GGTCCTTCACTATCAACCTCAAATGATATGCTCTGAAGAATTCCTGATTTTCTTCTTCAA
                      ____________________________________________________________
consensus             GGTCCTTCACTATCAACCTCAAATGATATGCTCTGAAGAATTCCTGATTTTCTTCTTCAA
 
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JMFF041O24+           GCTTTTGCCACACAAGTTCAGTAAAGCCAGGCTCAATCTTGGCTTGATCTAAGAGGGTAC
JMSF022O11+           GCTTTTGCCACACAAGTTCAGTAAAGCCAGGCTCAATCTTGGCTTGATCTAAGAGGGTAC
                      ____________________________________________________________
consensus             GCTTTTGCCACACAAGTTCAGTAAAGCCAGGCTCAATCTTGGCTTGATCTAAGAGGGTAC
 
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JMFF041O24+           GCACAACTTCTTTCTGGGTCATGTAAAGTTGTAAACATCTTTCTATAAGATTTTGCACCA
JMSF022O11+           GCACAACTTCTTTCTGGGTCATGTAAAGTTGTAAACATCTTTCTATAAGATTTTGCACCA
                      ____________________________________________________________
consensus             GCACAACTTCTTTCTGGGTCATGTAAAGTTGTAAACATCTTTCTATAAGATTTTGCACCA
 
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JMFF041O24+           ATTGAATATCTTGACGAGAAACTTTCTTAATCTCTTCACTAGACATTTTTTCAATGCTCC
JMSF022O11+           ATTGAATATCTTGACGAGAAACTTTCTTAATCTCTTCACTAGACATTTTTTCAATGCTCC
                      ____________________________________________________________
consensus             ATTGAATATCTTGACGAGAAACTTTCTTAATCTCTTCACTAGACATTTTTTCAATGCTCC
 
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JMFF041O24+           AATAAGAACTTCGGCTAAAACTTCAACACACACAGCACAAGTAACTCTTGCTCAAACACT
JMSF022O11+           AATAAGAACTTCGGCTAAAACTTCAACACACACAGCACAAGTAACTCTTGCTCAAACACT
                      ____________________________________________________________
consensus             AATAAGAACTTCGGCTAAAACTTCAACACACACAGCACAAGTAACTCTTGCTCAAACACT
 
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JMFF041O24+           TGTCAATGGTAGTGCAAAATCTTCACACCTAAAGCAAAATCAGAGTGTAAGTTTGGGGAA
JMSF022O11+           TGTCAATGGTAGTGCAAAATCTTCACACCTAAAGCAAAATCAGAGTGTAAGTTTGGGGAA
                      ____________________________________________________________
consensus             TGTCAATGGTAGTGCAAAATCTTCACACCTAAAGCAAAATCAGAGTGTAAGTTTGGGGAA
 
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JMFF041O24+           TCAATTGATGACGCCGGCGGCCGGCGGCGACAACCGTCCGTCCGTCCGATTGGGTTCTCT
JMSF022O11+           TCAATTGATGACGCCGGCGGCCGGCGGCGACAACCGTCCGTCCGTCCGATTGGGTTCTCT
                      ____________________________________________________________
consensus             TCAATTGATGACGCCGGCGGCCGGCGGCGACAACCGTCCGTCCGTCCGATTGGGTTCTCT
 
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JMFF041O24+           CCCTGCACCAGACTTTTTGTGCAGGAGAGAGTTTTCCACAAGAGATTGGGAAGATCAGAT
JMSF022O11+           CCCTGCACCAGACTTTTTGTGCAGGAGAGAGTTTTCCACAAGAGATTGGGAAGATCAGAT
                      ____________________________________________________________
consensus             CCCTGCACCAGACTTTTTGTGCAGGAGAGAGTTTTCCACAAGAGATTGGGAAGATCAGAT
 
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JMFF041O24+           TCTTCGAAAGCTAATTAAAAAAATCCAGAAACTCGATCACGTTTTGTTT           
JMSF022O11+           TCTTCGAAAGCTAATTAAAAAAATCCAGAAACTCGATCACGTTTTGTTTCTGGGAGCCCC
                      ____________________________________________________________
consensus             TCTTCGAAAGCTAATTAAAAAAATCCAGAAACTCGATCACGTTTTGTTTCTGGGAGCCCC