Contig 012005:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN028I13+                    GACAAACAAACTATTGCTGATTACTGAGGTTTGGGTAGCACTACTTGACAA
rJMSF022L21-                           AACTATTGCTGATTACTGAGGTTTGGGTAGCACTACTTGACAA
                      ____________________________________________________________
consensus                      GACAAACAAACTATTGCTGATTACTGAGGTTTGGGTAGCACTACTTGACAA
 
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JMFN028I13+           AGTGAATCAAACAGTTACAAATTGACTGATAAATTACTTGTTCACCCAATGGTAAAAACC
rJMSF022L21-          AGTGAATCAAACAGTTACAAATTGACTGATAAATTACTTGTTCACCCAATGGTAAAAACC
                      ____________________________________________________________
consensus             AGTGAATCAAACAGTTACAAATTGACTGATAAATTACTTGTTCACCCAATGGTAAAAACC
 
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JMFN028I13+           G-AAAAAAACAAAAAAAATCCACAGGAAGCTAAAAGAACTGTGGAACTAAAACTACATTG
rJMSF022L21-          GAAAAAAAACAAAAAAAATCCACAGGAAGCTAAAAGAACTGTGGAACTAAAACTACATTG
                      ____________________________________________________________
consensus             GAAAAAAAACAAAAAAAATCCACAGGAAGCTAAAAGAACTGTGGAACTAAAACTACATTG
 
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JMFN028I13+           AACTTTGCCTGTGTGTGATAGAAATTATCTGCCTTTCAAGAATTGTGGAAAATGTGTTTT
rJMSF022L21-          AACTTTGCCTGTGTGTGATAGAAATTATCTGCCTTTCAAGAATTGTGGAAAATGTGTTTT
                      ____________________________________________________________
consensus             AACTTTGCCTGTGTGTGATAGAAATTATCTGCCTTTCAAGAATTGTGGAAAATGTGTTTT
 
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JMFN028I13+           CCCTGTACAAAGATTCTCAGATCTCAACGGGCGATTTCTGACTTGGTCGTCGTGTAGCCC
rJMSF022L21-          CCCTGTACAAAGATTCTCAGATCTCAACGGGCGATTTCTGACTTGGTCGTCGTGTAGCCC
                      ____________________________________________________________
consensus             CCCTGTACAAAGATTCTCAGATCTCAACGGGCGATTTCTGACTTGGTCGTCGTGTAGCCC
 
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JMFN028I13+           AGCTGTTGCTCCATCTCCCAGCTTAACTTTGGGGCAACCCCATTGTGTTTTGGGACATAG
rJMSF022L21-          AGCTGTTGCTCCATCTCCCAGCTTAACTTTTGGGCAACCCCATTGTGTTTTGGGACATAG
                      ____________________________________________________________
consensus             AGCTGTTGCTCCATCTCCCAGCTTAACTTTTGGGCAACCCCATTGTGTTTTGGGACATAG
 
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JMFN028I13+           TCCTCAAGCCTGGACATGAGTTCTTGGGCAGTCGGGGCAGATACGACGATGTGGCGGGCA
rJMSF022L21-          TCCTCAAGCCTGGACATGAGTTCTTGGGCAGTCGGGGCAGATACGACGATGTGGCGGGCA
                      ____________________________________________________________
consensus             TCCTCAAGCCTGGACATGAGTTCTTGGGCAGTCGGGGCAGATACGACGATGTGGCGGGCA
 
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JMFN028I13+           GATGGGGTGATGAATCCTTCATTGACAGCTATTGTCTATGAAACACAGAAGGGAGTTGTA
rJMSF022L21-          GATGGGGTGATGAATCCTTCATTGACAGCT-TTGTCTATGAAACACAGAAGGGAGTTGTA
                      ____________________________________________________________
consensus             GATGGGGTGATGAATCCTTCATTGACAGCTATTGTCTATGAAACACAGAAGGGAGTTGTA
 
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JMFN028I13+           GTACCCATCTACATTCAGCAGACCAACC                                
rJMSF022L21-          GTACCCATCTACATTCAGCAGACCAACCGGTTTGTCATGAATGCCTAACTGAGCCCAAGT
JMSF022L21+                                                                CCCAAGT
                      ____________________________________________________________
consensus             GTACCCATCTACATTCAGCAGACCAACCGGTTTGTCATGAATGCCTAACTGAGCCCAAGT
 
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rJMSF022L21-          TATGACCTCCAGGAGCTCCTCTAAAGTTCCATACCCACCTGGCAAAGCTATGAAAGCATC
JMSF022L21+           TATGACCTCCAGGAGCTCCTCTAAAGTTCCATACCCACCTGGCAAAGCTATGAAAGCATC
                      ____________________________________________________________
consensus             TATGACCTCCAGGAGCTCCTCTAAAGTTCCATACCCACCTGGCAAAGCTATGAAAGCATC
 
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rJMSF022L21-          AGATTGTTTGGCCATTTCTGCCTTCCTTTGGTGCATACCAGACACAGCTCTCACTTCCCC
JMSF022L21+           AGATTGTTTGGCCATTTCTGCCTTCCTTTGGTGCATACCAGACACAGCTCTCACTTCCCC
                      ____________________________________________________________
consensus             AGATTGTTTGGCCATTTCTGCCTTCCTTTGGTGCATACCAGACACAGCTCTCACTTCCCC
 
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rJMSF022L21-          CACTGTCTCTCCAGTGATCTCTCTTGGCATCAGAGTTTTAGGAATCACCCCTAAAACATG
JMSF022L21+           CACTGTCTCTCCAGTGATCTCTCTTGGCATCAGAGTTTTAGGAATCACCCCTAAAACATG
                      ____________________________________________________________
consensus             CACTGTCTCTCCAGTGATCTCTCTTGGCATCAGAGTTTTAGGAATCACCCCTAAAACATG
 
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rJMSF022L21-          TCTTCCACCATTATAAACAGCTTG                                    
JMSF022L21+           TCTTCCACCATTATAAACAGCTTGGGAAACTAGACCCATCAAGCCTATGCTCCCACCTCC
                      ____________________________________________________________
consensus             TCTTCCACCATTATAAACAGCTTGGGAAACTAGACCCATCAAGCCTATGCTCCCACCTCC
 
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JMSF022L21+           ATAAACCAAGTCTATGTTCCTTTCAACCAGTTGGTTTGCTAGCTGGATAGCTGCAAGCTG
                      ____________________________________________________________
consensus             ATAAACCAAGTCTATGTTCCTTTCAACCAGTTGGTTTGCTAGCTGGATAGCTGCAAGCTG
 
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JMSF022L21+           GTAACTAGGGTTCTTGCCAGGGCTGCTGCCACAGAAAACACAGACCCTCTTGAATCTTGA
                      ____________________________________________________________
consensus             GTAACTAGGGTTCTTGCCAGGGCTGCTGCCACAGAAAACACAGACCCTCTTGAATCTTGA
 
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JMSF022L21+           TGGCCTTGTGGGCTGATGAGAAGGAGGAGATGGGGATTGGAACTGGTGGGTGTTTTCCAT
                      ____________________________________________________________
consensus             TGGCCTTGTGGGCTGATGAGAAGGAGGAGATGGGGATTGGAACTGGTGGGTGTTTTCCAT
 
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JMSF022L21+           AGTTGTGAAAAAAGCAATTTTGTGTAGTACCCTTTTGTTCTTGGTGCTTTCTGGTAGTAA
                      ____________________________________________________________
consensus             AGTTGTGAAAAAAGCAATTTTGTGTAGTACCCTTTTGTTCTTGGTGCTTTCTGGTAGTAA
 
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JMSF022L21+           TCCAAGGAGAGAAAGAGAGAGATAGAGGGAGAGAGAGATGGATTGGTAATAGGTGTGGAT
                      ____________________________________________________________
consensus             TCCAAGGAGAGAAAGAGAGAGATAGAGGGAGAGAGAGATGGATTGGTAATAGGTGTGGAT
 
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JMSF022L21+           GAGTTTAGAGGTGGGTCAGCAAGTTTTCTGCACTTCTCTGAAATTTGTATGGCAAGAAGC
                      ____________________________________________________________
consensus             GAGTTTAGAGGTGGGTCAGCAAGTTTTCTGCACTTCTCTGAAATTTGTATGGCAAGAAGC