Contig 011998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009J21Sequence320011998 (2)emb|CDP10916.1|3e-32unnamed protein product [Coffea canephora]828011260 (3)ref|XP_010656366.1|1e-63PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2 [Vitis vinifera]
JMSF022C16Sequence651011998 (2)ref|XP_006355933.1|9e-104PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Solanum tuberosum]814011260 (3)ref|XP_010656366.1|5e-68PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2 [Vitis vinifera]

Alignment

This contig is upended


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JMSF022C16+                    TTCCCAGCTAATACTTCAAATTTTGGAACTCGAAATTCATTTGTGATGCTT
                      ____________________________________________________________
consensus                      TTCCCAGCTAATACTTCAAATTTTGGAACTCGAAATTCATTTGTGATGCTT
 
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JMSF022C16+           CCAACTTTATTCACAATTGTCTGAATTCTGGGGTAATTTTTATCGTAGATGACTTTTGCA
                      ____________________________________________________________
consensus             CCAACTTTATTCACAATTGTCTGAATTCTGGGGTAATTTTTATCGTAGATGACTTTTGCA
 
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JMSF022C16+           ATGACATCCTTGTACGGAAGAAGCTCATCGGTTATGTTCAAATGAGCAATATGACCTATT
                      ____________________________________________________________
consensus             ATGACATCCTTGTACGGAAGAAGCTCATCGGTTATGTTCAAATGAGCAATATGACCTATT
 
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JMSF022C16+           GTCTCAAAGGATGATGGAACTTCAAGTCCAGGAGGCAGAATCTGTTTTAGTATATGGTCT
                      ____________________________________________________________
consensus             GTCTCAAAGGATGATGGAACTTCAAGTCCAGGAGGCAGAATCTGTTTTAGTATATGGTCT
 
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JMSF022C16+           GCACTCCAATAGGAATACCCCAATGTCAGTGAATAAGGAACTACTTCAACCTCGCAAAGA
                      ____________________________________________________________
consensus             GCACTCCAATAGGAATACCCCAATGTCAGTGAATAAGGAACTACTTCAACCTCGCAAAGA
 
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JMSF009J21+                    TCAGCAAGCTTTTGAGCTGGAACTTNTGATAAATCTGGATTCTGGATGTTT
JMSF022C16+           CCTTTCAGTTCAGCAAGCTTTTGAGCTGGAACTTCTGATAAATCTGGATTCTGGATGTTT
                      ____________________________________________________________
consensus             CCTTTCAGTTCAGCAAGCTTTTGAGCTGGAACTTCTGATAAATCTGGATTCTGGATGTTT
 
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JMSF009J21+           TCAGATAAAATTACGTAGCGGTTCTTTTCACTTGTAGGATCTTCTGCGATAGGCTTTATG
JMSF022C16+           TCAGATAAAATTACGTAGCGGTTCTTTTCACTTGTAGGATCTTCTGCGATAGGCTTTATG
                      ____________________________________________________________
consensus             TCAGATAAAATTACGTAGCGGTTCTTTTCACTTGTAGGATCTTCTGCGATAGGCTTTATG
 
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JMSF009J21+           CGTGGCCTGTTAATCATATATCCGTTGAATATTCGAGTGGCGATTTTGCAATGTTGGCGC
JMSF022C16+           CGTGGCCTGTTAATCATATATCCGTTGAATATTCGAGTGGCGATTTTGCAATGTTGGCGC
                      ____________________________________________________________
consensus             CGTGGCCTGTTAATCATATATCCGTTGAATATTCGAGTGGCGATTTTGCAATGTTGGCGC
 
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JMSF009J21+           GGAATTCGAAGCGCCAACAGCTTCAGGTGCATATCAAACTTGCTCTCATCCAATTCCACC
JMSF022C16+           GGAATTCGAAGCGCCAACAGCTTCAGGTGCATATCAAACTTGCTCTCATCCAATTCCACC
                      ____________________________________________________________
consensus             GGAATTCGAAGCGCCAACAGCTTCAGGTGCATATCAAACTTGCTCTCATCCAATTCCACC
 
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JMSF009J21+           ATTTTTTCAGGCTGAGAATAAACAGAAATCCTCAAATTCTACAATACCAAAACTGAAATA
JMSF022C16+           ATTTTTTCAGGCTGAGAATAAACAGAAATCCTCAAATTCTACAATACCAAAACTGAAATA
                      ____________________________________________________________
consensus             ATTTTTTCAGGCTGAGAATAAACAGAAATCCTCAAATTCTACAATACCAAAACTGAAATA
 
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JMSF009J21+           GAGTAAAAGTAATGAAAACTTTGCGAA                                 
JMSF022C16+           GAGTAAAAGTAATGAAAACTTTGCGAATAAAAGTAATGCAGTATAGCTCATCAGTAAATC
                      ____________________________________________________________
consensus             GAGTAAAAGTAATGAAAACTTTGCGAATAAAAGTAATGCAGTATAGCTCATCAGTAAATC