| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036A10 | Sequence | 495 | 011996 (7) | ref|XP_009771745.1| | 141 | PREDICTED: uncharacterized protein LOC104222231 [Nicotiana sylvestris] | 646 | 011996 (7) | ref|XP_009591551.1| | 256 | PREDICTED: uncharacterized protein LOC104088555 [Nicotiana tomentosiformis] |
| JMFF050E09 | Sequence | 634 | 011996 (7) | ref|XP_009771745.1| | 212 | PREDICTED: uncharacterized protein LOC104222231 [Nicotiana sylvestris] | 470 | 011996 (7) | ref|XP_009795280.1| | 147 | PREDICTED: uncharacterized protein LOC104242005 [Nicotiana sylvestris] |
| JMFN013D04 | Sequence | 613 | 011996 (7) | ref|XP_009771745.1| | 211 | PREDICTED: uncharacterized protein LOC104222231 [Nicotiana sylvestris] | |||||
| JMFN043N19 | Sequence | 612 | 011996 (7) | ref|XP_009771745.1| | 211 | PREDICTED: uncharacterized protein LOC104222231 [Nicotiana sylvestris] | |||||
| JMSF021H14 | Sequence | 655 | 011996 (7) | ref|XP_009771745.1| | 223 | PREDICTED: uncharacterized protein LOC104222231 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF050E09- CACACAAAGGATCAATTTCTACATTTCCGTGAAGTTGAAGAACTCAATCTTCAAGTG
rJMFF036A10- TTTCCGTGAAGTTGAAGAACTCAATCTTCAAGTG
____________________________________________________________
consensus CACACAAAGGATCAATTTCTACATTTCCGTGAAGTTGAAGAACTCAATCTTCAAGTG
. : . : . : . : . : . :
rJMFF050E09- ATAGGATCCACTAAAGGTAGGAAGGAGTGGATCATAAATTTACTTATAAACAAATATATA
rJMFF036A10- ATAGGATCCACTAGAGGTAGGAAGGAGTGGATCATAAATTTACTTATAAACAAATATATA
____________________________________________________________
consensus ATAGGATCCACTAGAGGTAGGAAGGAGTGGATCATAAATTTACTTATAAACAAATATATA
. : . : . : . : . : . :
rJMFF050E09- TGTAGCTAGCTATAACATAATAATCAATATAATTCATCCATGTTCACACGACCGCCACCG
rJMFF036A10- TGTAGCTAGCTATAACATAATAATCAATATAATTCATCCATGTTCACACGACCGCCACCG
____________________________________________________________
consensus TGTAGCTAGCTATAACATAATAATCAATATAATTCATCCATGTTCACACGACCGCCACCG
. : . : . : . : . : . :
rJMFF050E09- CCGTGCGGTGCAAAGTGGGCAAATTGTCGAGCAAGTCAACGGTGAGCATCGACGCCGTAG
rJMFF036A10- CCGTGCGGTGCAAAGTGGGCAAATTGTCGAGCAAGTCAACGGTGAGCATCGACGCCGTAG
____________________________________________________________
consensus CCGTGCGGTGCAAAGTGGGCAAATTGTCGAGCAAGTCAACGGTGAGCATCGACGCCGTAG
. : . : . : . : . : . :
rJMFF050E09- GCCGGGGTGCTCGGCCACTGTATCCGGCGGACTCCGGCGGCGGCGCGGTGATGGTGCGGT
rJMFF036A10- GCCGGGGTGCTCGGCCACTGTATCCGGCGGACTCCGGCGGCGGCGCGGTGATGGTGCGGT
____________________________________________________________
consensus GCCGGGGTGCTCGGCCACTGTATCCGGCGGACTCCGGCGGCGGCGCGGTGATGGTGCGGT
. : . : . : . : . : . :
rJMFF050E09- GGCACGTTCTGAGCCACTTGGCTTGCATGTACTTTTGCTTTCTCCAAGGACCCAGGGGCA
rJMFF036A10- GGCACGTTCTGAGCCACTTGGCTTGCATGTACTTTTGCTTTCTCCAAGGACCCAGGTGCA
____________________________________________________________
consensus GGCACGTTCTGAGCCACTTGGCTTGCATGTACTTTTGCTTTCTCCAAGGACCCAGGTGCA
. : . : . : . : . : . :
rJMFF050E09- TTTTCCTCTCCTTCATGCACCTCTTCGCCGCCGTGCACATGATCTTGATCACCGACAATA
rJMFF036A10- TTTTCCTCTCCTTCATGCACCTCTTCGCCGCCGTGCACATGATCTTGATCACCGACAATA
____________________________________________________________
consensus TTTTCCTCTCCTTCATGCACCTCTTCGCCGCCGTGCACATGATCTTGATCACCGACAATA
. : . : . : . : . : . :
rJMFF050E09- GCCTCTCTATTTTTCCGACGAAAACTTCCGGCAGGCTCGTGACAAGTCGCCCG
rJMFF036A10- GCCTCTCTATTTTTCCGACGAAAACTTCCGGCAGGCTCGTGACAAGTCGCCCGTACTCTT
____________________________________________________________
consensus GCCTCTCTATTTTTCCGACGAAAACTTCCGGCAGGCTCGTGACAAGTCGCCCGTACTCTT
. : . : . : . : . : . :
rJMFF036A10- CATTTGATCTCGCCATCTCAAACTCCCCTCGAAAATTTAGTTCGATTATGATCCTCACTT
JMFF050E09+ GAAAATNTAGTTCGATTATGATCCTCACTT
JMFN043N19+ AAAATTTAGTTCGATTATGATCCTCACTT
JMFN013D04+ GAAAATTTAGTTCGATTATGATCCTCACTT
JMSF021H14+ GATCTCGCCATCTCAAACTCCCCTCGAAAATTTAGTTCGATTATGATCCTCACTT
____________________________________________________________
consensus CATTTGATCTCGCCATCTCAAACTCCCCTCGAAAATTTAGTTCGATTATGATCCTCACTT
. : . : . : . : . : . :
rJMFF036A10- CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
JMFF050E09+ CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
JMFN043N19+ CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
JMFN013D04+ CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
JMSF021H14+ CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
____________________________________________________________
consensus CTCCCCTTTTGGGATTATTTGAATTCTCCATCACGTCTACAAATGTGTGTTCACCTGATG
. : . : . : . : . : . :
rJMFF036A10- GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
JMFF036A10+ TTGAAACCAGCATTTT
JMFF050E09+ GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
JMFN043N19+ GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
JMFN013D04+ GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
JMSF021H14+ GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
____________________________________________________________
consensus GGATATCTGATAGGTTCTTCCACTTAGACTTGCAAATTGCTGAGTTGAAACCAGCATTTT
. : . : . : . : . : . :
rJMFF036A10- GTAG
JMFF036A10+ GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
JMFF050E09+ GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
JMFN043N19+ GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
JMFN013D04+ GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
JMSF021H14+ GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
____________________________________________________________
consensus GTAGACGCCGGAAAACCTCATTCATTCGGCAGCTCCGGCAGCCGCCGTCCACCGGTTTCT
. : . : . : . : . : . :
JMFF036A10+ GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
JMFF050E09+ GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
JMFN043N19+ GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
JMFN013D04+ GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
JMSF021H14+ GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
____________________________________________________________
consensus GACAAGCACACATGTTTCCGGCTTGCTTTGCTTCTTTTAATGTTTCTTTAGTAATACTCC
. : . : . : . : . : . :
JMFF036A10+ GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
JMFF050E09+ GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
JMFN043N19+ GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
JMFN013D04+ GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
JMSF021H14+ GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
____________________________________________________________
consensus GGATTCTTGATTCTGCCGAGGTGGTCCTGCATAACGTAGCATGTAAGAGATTGTATTGAT
. : . : . : . : . : . :
JMFF036A10+ TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
JMFF050E09+ TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
JMFN043N19+ TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
JMFN013D04+ TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
JMSF021H14+ TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
____________________________________________________________
consensus TTTCCCAGAAATCACTCTCTTGAACGATTTCTTTTTCTTCGTTTTCATCATCTTCATCAC
. : . : . : . : . : . :
JMFF036A10+ GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
JMFF050E09+ GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
JMFN043N19+ GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
JMFN013D04+ GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
JMSF021H14+ GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
____________________________________________________________
consensus GTACATTATCGCAGATGGAGTACTGGGACGACGACGACGACCGTTCACCTTCATCGTCGA
. : . : . : . : . : . :
JMFF036A10+ GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
JMFF050E09+ GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
JMFN043N19+ GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
JMFN013D04+ GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
JMSF021H14+ GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
____________________________________________________________
consensus GAAACTCGAAGACGGTATCGGACAAATTAATGGCCGGGTCGCCGGAAAAGTCGATGTCCG
. : . : . : . : . : . :
JMFF036A10+ TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
JMFF050E09+ TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
JMFN043N19+ TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
JMFN013D04+ TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
JMSF021H14+ TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
____________________________________________________________
consensus TTTTGTCACACCTCAAAATCCGATGATTCATCGGAATTTTAGCCACTTTTCCGACCATGG
. : . : . : . : . : . :
JMFF036A10+ CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAGCTAGGTTTGCGTTTT
JMFF050E09+ CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAGCTAGGTTTGCGTTTT
JMFN043N19+ CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAG
JMFN013D04+ CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAG
JMSF021H14+ CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAGCTAGGTTTGCGTTTTCC
____________________________________________________________
consensus CCGAATGTATTATTTAATGTTGTCGACTTAGGTCTATAACAAGCTAGGTTTGCGTTTTCC