Contig 011995:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS098B07Sequence626011995 (2)ref|XP_009773946.1|7e-103PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Nicotiana sylvestr
JMSF021F10Sequence666011995 (2)ref|XP_009773946.1|4e-113PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Nicotiana sylvestr767020376ref|XP_007215718.1|6e-105hypothetical protein PRUPE_ppa008949mg [Prunus persica] gb|EMJ16917.1| hypotheti

Alignment

This contig is upended


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JMSF021F10+                                                                 TTCCAA
                      ____________________________________________________________
consensus                                                                   TTCCAA
 
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JMFS098B07+                              ATTAAGCCTCGCCCCAGTTAACGCAAAATACTCCCCAAATC
JMSF021F10+           GTGCAACCAGTTCTTTACCATTAAGCCTCGCCCCAGTTAACGCAAAATACTCCCCAAATC
                      ____________________________________________________________
consensus             GTGCAACCAGTTCTTTACCATTAAGCCTCGCCCCAGTTAACGCAAAATACTCCCCAAATC
 
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JMFS098B07+           TGCCCGGAAGGCGAGAGTGAATATATGAGAATCCACAGTCAGTATGAAACCCAATACTTG
JMSF021F10+           TGCCCGGAAGGCGAGAGTGAATATATGAGAATCCACAGTCAGTATGAAACCCAATACTTG
                      ____________________________________________________________
consensus             TGCCCGGAAGGCGAGAGTGAATATATGAGAATCCACAGTCAGTATGAAACCCAATACTTG
 
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JMFS098B07+           CTTCTGGAGTAGAAAAAACTGTCTTTTCAGTTACAACAGAGAACTTCATTGGGACCATCA
JMSF021F10+           CTTCTGGAGTAGAAAAAACTGTCTTTTCAGTTACAACAGAGAACTTCATTGGGACCATCA
                      ____________________________________________________________
consensus             CTTCTGGAGTAGAAAAAACTGTCTTTTCAGTTACAACAGAGAACTTCATTGGGACCATCA
 
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JMFS098B07+           ACGATGCACCTCCACCCATTGAAATGCCATGAACTAGAGCAACCTGGGGTTTTTTATAGG
JMSF021F10+           ACGATGCACCTCCACCCATTGAAATGCCATGAACTAGAGCAACCTGGGGTTTTTTATAGG
                      ____________________________________________________________
consensus             ACGATGCACCTCCACCCATTGAAATGCCATGAACTAGAGCAACCTGGGGTTTTTTATAGG
 
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JMFS098B07+           TGTGGATATGGTAACAAAGCCAATACATCCGGTAAACAACTTCAAGGCAAGAATCCTTTG
JMSF021F10+           TGTGGATATGGTAACAAAGCCAATACATCCGGTAAACAACTTCAAGGCAAGAATCCTTTG
                      ____________________________________________________________
consensus             TGTGGATATGGTAACAAAGCCAATACATCCGGTAAACAACTTCAAGGCAAGAATCCTTTG
 
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JMFS098B07+           GTGTCCTGCCATCATAAAACATTTTCAAGTCCCCACCAGCAGAATAAGCACGCCCAGCTC
JMSF021F10+           GTGTCCTGCCATCATAAAACATTTTCAAGTCCCCACCAGCAGAATAAGCACGCCCAGCTC
                      ____________________________________________________________
consensus             GTGTCCTGCCATCATAAAACATTTTCAAGTCCCCACCAGCAGAATAAGCACGCCCAGCTC
 
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JMFS098B07+           CCTTGAGGATGATGAGAGCTGCATTGTCATCTTTCTCCCATTTTTCCAGGTTTTGAGCCA
JMSF021F10+           CCTTGAGGATGATGAGAGCTGCATTGTCATCTTTCTCCCATTTTTCCAGGTTTTGAGCCA
                      ____________________________________________________________
consensus             CCTTGAGGATGATGAGAGCTGCATTGTCATCTTTCTCCCATTTTTCCAGGTTTTGAGCCA
 
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JMFS098B07+           GCAATTTTACCACTTCAGATGAAATGACATTCAATTGCTTGGGACGGTTTAAGGTGATCA
JMSF021F10+           GCAATTTTACCACTTCAGATGAAATGACATTCAATTGCTTGGGACGGTTTAAGGTGATCA
                      ____________________________________________________________
consensus             GCAATTTTACCACTTCAGATGAAATGACATTCAATTGCTTGGGACGGTTTAAGGTGATCA
 
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JMFS098B07+           ATCTAGCATTGCCAACTTCTTCAGCCAGAACAACCT                        
JMSF021F10+           ATCTAGCATTGCCAACTTCTTCAGCCAGAACAACCTCTCCATCTAGGTGTGCTGTTTCCT
                      ____________________________________________________________
consensus             ATCTAGCATTGCCAACTTCTTCAGCCAGAACAACCTCTCCATCTAGGTGTGCTGTTTCCT
 
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JMSF021F10+           GTGACATCTTCCTAGCCAATTAAGCAGGTATAGCTAATCACTCCCAGCAAGATGAATTCA
                      ____________________________________________________________
consensus             GTGACATCTTCCTAGCCAATTAAGCAGGTATAGCTAATCACTCCCAGCAAGATGAATTCA
 
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JMSF021F10+           ACTTGTGAATTTGGGTCTGTTCTACCACCCTCCACAGACTTGTCTTCAACACCAGAATCC
                      ____________________________________________________________
consensus             ACTTGTGAATTTGGGTCTGTTCTACCACCCTCCACAGACTTGTCTTCAACACCAGAATCC