Contig 011994:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021C13Sequence701011994 (2)ref|XP_006357937.1|9e-23PREDICTED: vesicle transport protein SFT2B-like isoform X2 [Solanum tuberosum]781007548 (3)emb|CDP20041.1|5e-06unnamed protein product [Coffea canephora]
JMSF023P18Sequence641011994 (2)ref|XP_006357937.1|6e-23PREDICTED: vesicle transport protein SFT2B-like isoform X2 [Solanum tuberosum]773007548 (3)emb|CDP20041.1|5e-06unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF021C13+                              TAAGATATATTTTCAAAATAGAAAATTTGATCCAAGCTCAT
                      ____________________________________________________________
consensus                                TAAGATATATTTTCAAAATAGAAAATTTGATCCAAGCTCAT
 
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JMSF023P18+                              GTATAAAAGTAAGAAGCAGAACTAATATNGGCATTGAATGA
JMSF021C13+           GCATCTATTGTTTACTTGCGTATAAAAGTAAGAAGCAGAACTAATATTGGCATTGAATGA
                      ____________________________________________________________
consensus             GCATCTATTGTTTACTTGCGTATAAAAGTAAGAAGCAGAACTAATATTGGCATTGAATGA
 
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JMSF023P18+           AATAAGAAACTAAGAATATTAAACATAGAAACTCACCAAAAGTGTACAAGCAACACCAGT
JMSF021C13+           AATAAGAAACTAAGAATATTAAACATAGAAACTCACCAAAAGTGTACAAGCAACACCAGT
                      ____________________________________________________________
consensus             AATAAGAAACTAAGAATATTAAACATAGAAACTCACCAAAAGTGTACAAGCAACACCAGT
 
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JMSF023P18+           AGCGAAGCAAATGGCAAATCCATAAAGCCTCTGCTTGGTGGAGAGAGTGCAGTTGCGATT
JMSF021C13+           AGCGAAGCAAATGGCAAATCCATAAAGCCTCTGCTTGGTGGAGAGAGTGCAGTTGCGATT
                      ____________________________________________________________
consensus             AGCGAAGCAAATGGCAAATCCATAAAGCCTCTGCTTGGTGGAGAGAGTGCAGTTGCGATT
 
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JMSF023P18+           GAAGTCGTCGACGAAAGCAAAAGACGAATCCTGCTGCTGATCAGCTTCATCGTCTTCCAC
JMSF021C13+           GAAGTCGTCGACGAAAGCAAAAGACGAATCCTGCTGCTGATCAGCTTCATCGTCTTCCAC
                      ____________________________________________________________
consensus             GAAGTCGTCGACGAAAGCAAAAGACGAATCCTGCTGCTGATCAGCTTCATCGTCTTCCAC
 
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JMSF023P18+           ATCCATTCCCACCAGCATCTTCATCTTCTCCAGCGCCTGGTTCATCTTCTCCATTTCTCT
JMSF021C13+           ATCCATTCCCACCAGCATCTTCATCTTCTCCAGCGCCTGGTTCATCTTCTCCATTTCTCT
                      ____________________________________________________________
consensus             ATCCATTCCCACCAGCATCTTCATCTTCTCCAGCGCCTGGTTCATCTTCTCCATTTCTCT
 
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JMSF023P18+           CTACCTCTCTATCCTACCGTATCGGCTCCGCTTCGTAGCACTTCAACAGTACTCTGCGCT
JMSF021C13+           CTACCTCTCTATCCTACCGTATCGGCTCCGCTTCGTAGCACTTCAACAGTACTCTGCGCT
                      ____________________________________________________________
consensus             CTACCTCTCTATCCTACCGTATCGGCTCCGCTTCGTAGCACTTCAACAGTACTCTGCGCT
 
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JMSF023P18+           GCACTCTCTGTCTCGCTCCTTCCACAGATACATACACACACACACACTCTCTCTCTCTCT
JMSF021C13+           GCACTCTCTGTCTCGCTCCTTCCACAGATACATACACACACACACACTCTCTCTCTCTCT
                      ____________________________________________________________
consensus             GCACTCTCTGTCTCGCTCCTTCCACAGATACATACACACACACACACTCTCTCTCTCTCT
 
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JMSF023P18+           AGCTACAGATGTGTGCGTACAGACATTCACCTCTGCGCTAGGTCGAAAATCAACGGAAGA
JMSF021C13+           AGCTACAGATGTGTGCGTACAGACATTCACCTCTGCGCTAGGTCGAAAATCAACGGAAGA
                      ____________________________________________________________
consensus             AGCTACAGATGTGTGCGTACAGACATTCACCTCTGCGCTAGGTCGAAAATCAACGGAAGA
 
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JMSF023P18+           TGAAGATGGGGACGGATCAACGCACTCAATTCAGGACTATACGTCTATACTGCTCTTCGT
JMSF021C13+           TGAAGATGGGGACGGATCAACGCACTCAATTCAGGACTATACGTCTATACTGCTCTTCGT
                      ____________________________________________________________
consensus             TGAAGATGGGGACGGATCAACGCACTCAATTCAGGACTATACGTCTATACTGCTCTTCGT
 
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JMSF023P18+           CAGTTGGGATCTACCGGCTCTCTTTAGGCCGTTCGCTCTTTTATACTTTTATGGCCTTAC
JMSF021C13+           CAGTTGGGATCTACCGGCTCTCTTTAGGCCGTTCGCTCTTTTATACTTTTATGGCCTTAC
                      ____________________________________________________________
consensus             CAGTTGGGATCTACCGGCTCTCTTTAGGCCGTTCGCTCTTTTATACTTTTATGGCCTTAC
 
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JMSF023P18+           GCGATCCTAAATTGAACCGGTCCGTCCTTCATGAATCCGGAGGCTTCATTTGTTACATTC
JMSF021C13+           GCGATCCTAAATTGAACCGGTCCGTCCTTCATGAATCCGGAGGCTTCATTTGTTACATTC
                      ____________________________________________________________
consensus             GCGATCCTAAATTGAACCGGTCCGTCCTTCATGAATCCGGAGGCTTCATTTGTTACATTC