| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS030G07 | Sequence | 455 | 011986 (6) | ref|XP_009770914.1| | 2e-44 | PREDICTED: uncharacterized protein LOC104221547 isoform X3 [Nicotiana sylvestri | |||||
| JMFS090E01 | Sequence | 590 | 011986 (6) | ref|XP_009770914.1| | 7e-73 | PREDICTED: uncharacterized protein LOC104221547 isoform X3 [Nicotiana sylvestri | |||||
| JMFS128A05 | Sequence | 326 | 011986 (6) | ref|XP_009770913.1| | 3e-23 | PREDICTED: uncharacterized protein LOC104221547 isoform X2 [Nicotiana sylvestri | |||||
| JMFS128D06 | Sequence | 626 | 011986 (6) | ref|XP_009770914.1| | 2e-82 | PREDICTED: uncharacterized protein LOC104221547 isoform X3 [Nicotiana sylvestri | |||||
| JMSF019P05 | Sequence | 498 | 011986 (6) | ref|XP_009770914.1| | 3e-28 | PREDICTED: uncharacterized protein LOC104221547 isoform X3 [Nicotiana sylvestri | 734 | 008650 (2) | ref|XP_009601355.1| | 8e-40 | PREDICTED: uncharacterized protein LOC104096654 isoform X3 [Nicotiana tomentosi |
| JMSF046O01 | Sequence | 759 | 011986 (6) | ref|XP_009770914.1| | 4e-100 | PREDICTED: uncharacterized protein LOC104221547 isoform X3 [Nicotiana sylvestri | 784 | 008650 (2) | gb|EYU34030.1| | 2e-39 | hypothetical protein MIMGU_mgv1a001058mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF046O01+ ATCACACGCCTTTGCCGTGTCAAATAGATTAA
____________________________________________________________
consensus ATCACACGCCTTTGCCGTGTCAAATAGATTAA
. : . : . : . : . : . :
JMFS128D06+ GAACATCATTATCAGCACCATGGAATA
JMSF046O01+ CAACGTATATATGAAAATCTCTTTGAAGCCAGAGAACATCATTATCAGCACCATGGAATA
____________________________________________________________
consensus CAACGTATATATGAAAATCTCTTTGAAGCCAGAGAACATCATTATCAGCACCATGGAATA
. : . : . : . : . : . :
JMFS128D06+ CCTTACAAATCTCTGGATTAGCAAATATAGGCCGAAGAATTCCCATCATGTCATGCAGGG
JMFS090E01+ ATCTCTGGATTAGCAAATATAGGCCGAAGAATTCCCATCATGTCATGCAGGG
JMSF046O01+ CCTTACAAATCTCTGGATTAGCAAATATAGGCCGAAGAATTCCCATCATGTCATGCAGGG
____________________________________________________________
consensus CCTTACAAATCTCTGGATTAGCAAATATAGGCCGAAGAATTCCCATCATGTCATGCAGGG
. : . : . : . : . : . :
JMFS128D06+ CTATTGCATCCACAAGATAGTCCTCCCTCTCGGTTGATATCTGAATTAAACAGGTGAAAC
JMFS090E01+ CTATTGCATCCACAAGATAGTCCTCCCTCTCGGTTGATATCTGAATTAAACAGGTGAAAC
JMSF046O01+ CTATTGCATCCACAAGATAGTCCTCCCTCTCGGTTGATATCTGAATTAAACAGGTGAAAC
____________________________________________________________
consensus CTATTGCATCCACAAGATAGTCCTCCCTCTCGGTTGATATCTGAATTAAACAGGTGAAAC
. : . : . : . : . : . :
JMFS128D06+ CTAAGAAGGATCTCAAACTATGCTGCTCCGTATCGACAGCAAATACTCTCTCACCACTCA
JMFS090E01+ CTAAGAAGGATCTCAAACTATGCTGCTCCGTATCGACAGCAAATACTCTCTCACCACTCA
JMFS030G07+ TGCTCCGTATCGACAGCAAATACTCTCTCACCACTCA
JMSF046O01+ CTAAGAAGGATCTCAAACTATGCTGCTCCGTATCGACAGCAAATACTCTCTCACCACTCA
____________________________________________________________
consensus CTAAGAAGGATCTCAAACTATGCTGCTCCGTATCGACAGCAAATACTCTCTCACCACTCA
. : . : . : . : . : . :
JMFS128D06+ ACACCTCCGCCAGCTCCTGCAACTGCGACTCCGTCTCCACCCACACGTACGAATCACGGC
JMFS090E01+ ACACCTCCGCCAGCTCCTGCAACTGCGACTCCGTCTCCACCCACACGTACGAATCACGGC
JMFS128A05+ CACGGC
JMFS030G07+ ACACCTCCGCCAGCTCCTGCAATTGCGACTCCGTCTCCACCCACACGTACGAATCACGGC
JMSF046O01+ ACACCTCCGCCAGCTCCTGCAACTGCGACTCCGTCTCCACCCACACGTACGAATCACGGC
JMSF019P05+ CACACGTACGAATCACGGC
____________________________________________________________
consensus ACACCTCCGCCAGCTCCTGCAACTGCGACTCCGTCTCCACCCACACGTACGAATCACGGC
. : . : . : . : . : . :
JMFS128D06+ TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
JMFS090E01+ TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
JMFS128A05+ TCGCCAATTCCTCCGAATTCTCATTAAAAAGCTCCAAAATGTCCACATTAGGTTCCTTCA
JMFS030G07+ TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
JMSF046O01+ TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
JMSF019P05+ TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
____________________________________________________________
consensus TCGCCAATTCCTCCAAATTCTCATTAAAAAGCTCCAAAATCTCCACATTAGGTTCCTTCA
. : . : . : . : . : . :
JMFS128D06+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
JMFS090E01+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
JMFS128A05+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
JMFS030G07+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
JMSF046O01+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
JMSF019P05+ ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
____________________________________________________________
consensus ATAAGGCCGAAATCTCCACTTTGTATGGATGCAAATTCACACATTCCTCAGAGGTGGAAT
. : . : . : . : . : . :
JMFS128D06+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
JMFS090E01+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
JMFS128A05+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCTCGACGCGCTTGAAAGTGT
JMFS030G07+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
JMSF046O01+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
JMSF019P05+ TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
____________________________________________________________
consensus TGAGCTTGAGGTGTTTGAAGGAAGAGTAGGAATTGTCAGCCACGACGCGCTTGAAAGTGT
. : . : . : . : . : . :
JMFS128D06+ ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
JMFS090E01+ ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
JMFS128A05+ CCTAAGGTTTGGATTCCGCATTGAGATAGCACGGAGAACGGTGAAATCTTTCGACGACTT
JMFS030G07+ ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
JMSF046O01+ ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
JMSF019P05+ ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
____________________________________________________________
consensus ACTGAGGTTTGGATTCCGCATTGAGATAGCACGGAGAAC-GTGAAATCTTTCGGCGACTT
. : . : . : . : . : . :
JMFS128D06+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
JMFS090E01+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
JMFS128A05+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
JMFS030G07+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
JMSF046O01+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
JMSF019P05+ CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
____________________________________________________________
consensus CGTTTCCGATGATTATGGAGTTTCGATGCGACGAAGATAGAGACCGCAAGCGTAATGCAA
. : . : . : . : . : . :
JMFS128D06+ GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAA
JMFS090E01+ GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAA
JMFS128A05+ GTAGCGATTGTTAGTTTGAG
JMFS030G07+ GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAA
JMSF046O01+ GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAAT
JMSF019P05+ GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAAT
____________________________________________________________
consensus GTAGCGATTGTTAGTTTGAGAGCTAGCTTCACTTTGTCTCTGTTTTCCATTGAATCAAAT
. : . : . : . : . : . :
JMSF046O01+ GCGATTCGTATCTGTGATCCTGTCCGATGCGCTTTGCTTTGTATTAATCTGGGAGTGCGA
JMSF019P05+ GCGATTCGTATCTGTGATCCTGTCCGATGCGCTTTGCTTTGTATTAATCTGGGAGTGCGA
____________________________________________________________
consensus GCGATTCGTATCTGTGATCCTGTCCGATGCGCTTTGCTTTGTATTAATCTGGGAGTGCGA
. : . : . : . : . : . :
JMSF046O01+ AATTTCT
JMSF019P05+ AATTTCTGGAGTTTGGTAAGGGGGTTTTGGGGGGTTTTGCCGGCGCACAATTTTGCAAGC
____________________________________________________________
consensus AATTTCTGGAGTTTGGTAAGGGGGTTTTGGGGGGTTTTGCCGGCGCACAATTTTGCAAGC