Contig 011980:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018K16-            TACCAAAGATTAAACTTAGCTCCGGGGCAATCCAACAAGGATGAAATCACAGACCATA
rJMSF021C11-                               CTCCGGGGCAATCCAACAAGGATGAAATCACAGACCATA
                      ____________________________________________________________
consensus               TACCAAAGATTAAACTTAGCTCCGGGGCAATCCAACAAGGATGAAATCACAGACCATA
 
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rJMSF018K16-          AGGAAACACTAGTACTGCAAGTTTGATGAATCTAAGAAAGGAAAGATTCAAAGAAAAAAC
rJMSF021C11-          AGGAAACACTAGTACTGCAAGTTTGATGAATCTAAGAAAGGAAAGATTCAAAGAAAAAAC
                      ____________________________________________________________
consensus             AGGAAACACTAGTACTGCAAGTTTGATGAATCTAAGAAAGGAAAGATTCAAAGAAAAAAC
 
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rJMSF018K16-          TGGGAAAACACAGGACTGCTAGGTTCTCAAGACTTCAGTACAAGGAATTCCAGTTACAGC
rJMSF021C11-          TGGGAAAACACAGGACTGCTAGGTTCTCAAGACTTCAGTACAAGGAATTCCAGTTACAGC
                      ____________________________________________________________
consensus             TGGGAAAACACAGGACTGCTAGGTTCTCAAGACTTCAGTACAAGGAATTCCAGTTACAGC
 
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rJMSF018K16-          CCCATCACATGCAGCATTATCGCATTCTGGGCATGCATGCGGTTTTCAGCTTGGGGGAAA
rJMSF021C11-          CCCATCACATGCAGCATTATCGCATTCTGGGCATGCATGCGGTTTTCAGCTTGGGGGAAA
                      ____________________________________________________________
consensus             CCCATCACATGCAGCATTATCGCATTCTGGGCATGCATGCGGTTTTCAGCTTGGGGGAAA
 
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rJMSF018K16-          ACAATTGAGTTTGGCGCTTCAATTACACCATCAGTGACTTCCACGCCTCTTTCTGCTGGT
rJMSF021C11-          ACAATTGAGTTTGGCGCTTCAATTACACCATCAGTGACTTCCACGCCTCTTTCTGCTGGT
                      ____________________________________________________________
consensus             ACAATTGAGTTTGGCGCTTCAATTACACCATCAGTGACTTCCACGCCTCTTTCTGCTGGT
 
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rJMSF018K16-          AAACAATGCATGAAATAGGCTTGTGGACCGGCTAATTTCATGAGATTTTCATCCACCTGG
rJMSF021C11-          AAACAATGCATGAAATAGGCTTGTGGACCGGCTAATTTCATGAGATTTTCATCCACCTGG
                      ____________________________________________________________
consensus             AAACAATGCATGAAATAGGCTTGTGGACCGGCTAATTTCATGAGATTTTCATCCACCTGG
 
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rJMSF018K16-          AATCCTTGAAAGACTTGACGGCGATGTGCTGCTTCCTCCTTTTGGCCCATGCTAGCCCAA
rJMSF021C11-          AATCCTTGAAAGACTTGACGGCGATGTGCTGCTTCCTCCTTTTGGCCCATGCTAGCCCAA
                      ____________________________________________________________
consensus             AATCCTTGAAAGACTTGACGGCGATGTGCTGCTTCCTCCTTTTGGCCCATGCTAGCCCAA
 
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rJMSF018K16-          ACATCTGAATACACAACATCAGCTCCTTTGACAGCCTCCTTAGGGTCATTAGTTATTTCA
rJMSF021C11-          ACATCTGAATACACAACATCAGCTCCTTTGACAGCCTCCTTAGGGTCATTAGTTATTTCA
                      ____________________________________________________________
consensus             ACATCTGAATACACAACATCAGCTCCTTTGACAGCCTCCTTAGGGTCATTAGTTATTTCA
 
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rJMSF018K16-          ATTTTGCTAACTCCGGCCTGTCGNGCTATATCAACTGTCTTCTCATCAGGCTCATACCCT
rJMSF021C11-          ATTTTGCTAACTCCGGCCTGTCGTGCTATATCAACTGTCTTCTCATCAGGCTCATACCCT
                      ____________________________________________________________
consensus             ATTTTGCTAACTCCGGCCTGTCGTGCTATATCAACTGTCTTCTCATCAGGCTCATACCCT
 
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rJMSF018K16-          TTTGGGCAAGCACAAACAAAGTGGAAAGGAATTACAGCAGCCAATAAAAGCCAGGAGTGC
rJMSF021C11-          TTTGGGCAAGCACAAACAAAGTGGAAAGGAATTACAGCAGCCAATAAAAGCCAGGAGTGC
                      ____________________________________________________________
consensus             TTTGGGCAAGCACAAACAAAGTGGAAAGGAATTACAGCAGCCAATAAAAGCCAGGAGTGC
 
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rJMSF018K16-          ACAATGTTGTTTCCATCGCCAACATAGACAACCTTTGTCCCTTCCAGATGGCCAACATGT
rJMSF021C11-          ACAATGTTGTTTCCATCGCCAACATAGACAACCTTTGTCCCTTCCAGATGGCCAACATGT
                      ____________________________________________________________
consensus             ACAATGTTGTTTCCATCGCCAACATAGACAACCTTTGTCCCTTCCAGATGGCCAACATGT
 
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rJMSF018K16-          TCAATTATTGTGAGGGCATCGGCCATTATTTGACAAGGATGGTTATAGTCTGTCAGGCCA
rJMSF021C11-          TCAATTATTGTGAGGGCATCGGCCATTATTTGACAAGGATGGTTATAGTCTGTCAGGCCA
                      ____________________________________________________________
consensus             TCAATTATTGTGAGGGCATCGGCCATTATTTGACAAGGATGGTTATAGTCTGTCAGGCCA
 
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rJMSF018K16-          TTGATCACAGGTACACTTGAA                                       
rJMSF021C11-          TTGATCACAGGTACACTTGAATATTTGGCTAGATCCAAAATGTCCTGATGAGCGAAAACA
JMSF021C11+                                                        TGATGAGCGAAAACA
                      ____________________________________________________________
consensus             TTGATCACAGGTACACTTGAATATTTGGCTAGATCCAAAATGTCCTGATGAGCGAAAACA
 
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rJMSF021C11-          CGTGCCATGATGATATCATTATAGCGAGAAAGAACACGAGCAACATCAC           
JMSF021C11+           CGTGCCATGATGATATCATTATAGCGAGAAAGAACACGAGCAACATCACGGGTTTCTTCT
                      ____________________________________________________________
consensus             CGTGCCATGATGATATCATTATAGCGAGAAAGAACACGAGCAACATCACGGGTTTCTTCT
 
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JMSF021C11+           CGCTTCCCCATCTGGATATCATTTGGTCCCAAATATAAGGCATGGCCACCAAGCAAGAAA
                      ____________________________________________________________
consensus             CGCTTCCCCATCTGGATATCATTTGGTCCCAAATATAAGGCATGGCCACCAAGCAAGAAA
 
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JMSF021C11+           AACCCAGTTTCAAATGAAACCCGAGTCCTCATGGATGGCTTGGCAAAAATCATTGCCATT
                      ____________________________________________________________
consensus             AACCCAGTTTCAAATGAAACCCGAGTCCTCATGGATGGCTTGGCAAAAATCATTGCCATT
 
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JMSF021C11+           GTTTTACCCTTAAATGGTTGATATGTTCTGTCGCCAGATTTTATGAGTGCCTTCACCTCT
JMSF018K16+             TTTACCCTTAAATGGTTGATATGTTCTGTCGCCAGATTTTATGAGTGCCTTCACCTCT
                      ____________________________________________________________
consensus             GTTTTACCCTTAAATGGTTGATATGTTCTGTCGCCAGATTTTATGAGTGCCTTCACCTCT
 
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JMSF021C11+           CTAGCTCTATCCAAGATTTTTAAAATAGTCTCCTTGTTAAAATCATTTATGTGAAGAAAG
JMSF018K16+           CTAGCTCTATCCAAGATTTTTAAAATAGTCTCCTTGTTAAAATCATTTATGTGAAGAAAG
                      ____________________________________________________________
consensus             CTAGCTCTATCCAAGATTTTTAAAATAGTCTCCTTGTTAAAATCATTTATGTGAAGAAAG
 
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JMSF021C11+           TCCTTCTGAGTCGTAGATTCTTTCCCACTGACTGAGGATAAAGATGTTGCTGGAGAGGCA
JMSF018K16+           TCCTTCTGAGTCGTAGATTCTTTCCCACTGACTGAGGATAAAGATGTTGCTGGAGAGGCA
                      ____________________________________________________________
consensus             TCCTTCTGAGTCGTAGATTCTTTCCCACTGACTGAGGATAAAGATGTTGCTGGAGAGGCA
 
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JMSF021C11+           GTTTGGCATGAGATGCGCTGACGGAAGGCTGGAAATGTGGTCCTGGATGGAACAGAGATG
JMSF018K16+           GTTTGGCATGAGATGCGCTGACGGAAGGCTGGAAATGTGGTCCTGGATGGAACAGAGATG
                      ____________________________________________________________
consensus             GTTTGGCATGAGATGCGCTGACGGAAGGCTGGAAATGTGGTCCTGGATGGAACAGAGATG
 
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JMSF021C11+           CCAAAGGACCGTAATGAAAGTCCATTGGAGGGAGTAAAATATGAAGCTGAGGAGCGTGAG
JMSF018K16+           CCAAAGGACCGTAATGAAAGTCCATTGGAGGGAGTAAAATATGAAGCTGAGGAGCGTGAG
                      ____________________________________________________________
consensus             CCAAAGGACCGTAATGAAAGTCCATTGGAGGGAGTAAAATATGAAGCTGAGGAGCGTGAG
 
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JMSF021C11+           GCTGAGTCGAATGATCCAACTGAGGCGAACTGCGAGGAAATAGCAGCCATTATTGGAGGT
JMSF018K16+           GCTGAGTCGAATGATCCAACTGAGGCGAACTGCGAGGAAATAGCAGCCATTATTGGAGGT
                      ____________________________________________________________
consensus             GCTGAGTCGAATGATCCAACTGAGGCGAACTGCGAGGAAATAGCAGCCATTATTGGAGGT
 
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JMSF021C11+           GATCAGAGAATTTGCTTGATAAACCCTAGGTTTGAGGATTCCTGCTGTTCAGATAAGCAA
JMSF018K16+           GATCAGAGAATTTGCTTGATAAACCCTAGGTTTGAGGATTCCTGCTGTTCAGATAAGCAA
                      ____________________________________________________________
consensus             GATCAGAGAATTTGCTTGATAAACCCTAGGTTTGAGGATTCCTGCTGTTCAGATAAGCAA
 
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JMSF021C11+           AGGCGGCCAGGCGACAGCACTTTGCGGAAGCTGAGAAAAATGAGAAATAAGCAGCGTCGA
JMSF018K16+           AGGCGGCCAGGCGACAGCACTTTGCGGAAGCTGAGAAAAATGAGAAATAAGCAGCGTCGA
                      ____________________________________________________________
consensus             AGGCGGCCAGGCGACAGCACTTTGCGGAAGCTGAGAAAAATGAGAAATAAGCAGCGTCGA
 
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JMSF021C11+           GGTGGCAGGCGGAGTGGCTTCAGCCGT                                 
JMSF018K16+           GGTGGCAGGCGGAGTGGCTTCAGCCGTGAAATCTTCAACAACTCATCGTCTAGGTTTTCC
                      ____________________________________________________________
consensus             GGTGGCAGGCGGAGTGGCTTCAGCCGTGAAATCTTCAACAACTCATCGTCTAGGTTTTCC