Contig 011979:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018G07-                                         CATAGAGCANGGTAATTCTAATTGGTAAA
                      ____________________________________________________________
consensus                                            CATAGAGCANGGTAATTCTAATTGGTAAA
 
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rJMSF018G07-          AGAGTTTATGGAATAATTATAACATATAAGTAGCCCACATTATTACATTACTGCTGTTGT
                      ____________________________________________________________
consensus             AGAGTTTATGGAATAATTATAACATATAAGTAGCCCACATTATTACATTACTGCTGTTGT
 
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rJMSF018G07-          GGTACATGGATAAAATAAATTTTGTCACTTCTGCTTACAACTCCATGGAGCAAAATCAGA
                      ____________________________________________________________
consensus             GGTACATGGATAAAATAAATTTTGTCACTTCTGCTTACAACTCCATGGAGCAAAATCAGA
 
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rJMSF018G07-          GAAAGGACCTTGCTTTATCTTCATGTCCTTCAATTTGGAGATGGGTACAAGCCCCACTTT
                      ____________________________________________________________
consensus             GAAAGGACCTTGCTTTATCTTCATGTCCTTCAATTTGGAGATGGGTACAAGCCCCACTTT
 
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rJMSF018G07-          GCTATGAGGAATTCAGGAGTTCTAAGTTGCCTGGAAAGCTTAAAAGCAAGGAGCTTGACC
                      ____________________________________________________________
consensus             GCTATGAGGAATTCAGGAGTTCTAAGTTGCCTGGAAAGCTTAAAAGCAAGGAGCTTGACC
 
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rJMSF018G07-          TGCTAAGTAAGCCATCACATAATAGTAAGTTATTACCTTCCAGCTACTGTATTTAAAATA
                      ____________________________________________________________
consensus             TGCTAAGTAAGCCATCACATAATAGTAAGTTATTACCTTCCAGCTACTGTATTTAAAATA
 
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rJMSF018G07-          AATAGAATGTTCATAGTAACTGTTAACATACAGCAAGTAATACTCATTGATAAAAGAGTT
                      ____________________________________________________________
consensus             AATAGAATGTTCATAGTAACTGTTAACATACAGCAAGTAATACTCATTGATAAAAGAGTT
 
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rJMSF018G07-          TATTGACAAATTAAAACATACAAGTAGCCCACATTACTGCTGTTGTGGTACATGGATAAA
                      ____________________________________________________________
consensus             TATTGACAAATTAAAACATACAAGTAGCCCACATTACTGCTGTTGTGGTACATGGATAAA
 
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rJMSF018G07-          ATAAATTGCAGCTCTTGCGCCTACGGCTCCATGGAGCAAAATCAGAGAAAGGACCTTGCT
                      ____________________________________________________________
consensus             ATAAATTGCAGCTCTTGCGCCTACGGCTCCATGGAGCAAAATCAGAGAAAGGACCTTGCT
 
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rJMSF018G07-          TTTAATTCAGGTTCTTCAATTTGGAGATCAGTACAAGCCCCACTTTGCTCTGAGAAATTC
JMFF038D17+                     GTTCTTCAATTTGGAGATCAGTACAAGCCCCACTTTGCTCTGAGAAATTC
                      ____________________________________________________________
consensus             TTTAATTCAGGTTCTTCAATTTGGAGATCAGTACAAGCCCCACTTTGCTCTGAGAAATTC
 
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rJMSF018G07-          ATGAGTGTTGAGTTGCCTGGAAAGCTTAAAAGCAAGGAGCTTGACTTGCTTCTGTAGAAC
JMFF038D17+           ATGAGTGTTGAGTNGCCTGGAAAGCTTAAAAGCAAGGAGCTTG-CTTGCTTCTGTAGAAC
                      ____________________________________________________________
consensus             ATGAGTGTTGAGTTGCCTGGAAAGCTTAAAAGCAAGGAGCTTGACTTGCTTCTGTAGAAC
 
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rJMSF018G07-          GGTCTATCGCCAGACTGGTGTCGACGGTCGCTGATATGTAGATGGTTAGGTTTTTTTTTC
JMFF038D17+           GGTCTATCGCCAGACTGGTGTCGACGGTCGCTGATATGTAGATGGTTAGGTTTTTTTTTC
JMSF018G07+                    CCAGACTGGTGTCGACGGTCGCTGATATGTAGATGGTTAGGTTTTTTTTTC
                      ____________________________________________________________
consensus             GGTCTATCGCCAGACTGGTGTCGACGGTCGCTGATATGTAGATGGTTAGGTTTTTTTTTC
 
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rJMSF018G07-          TGTTCTGGTATGGGTGTTAGTGATACTTTCTTCACCTCCGTTCTGTTTCTGAGTGATTTC
JMFF038D17+           TGTTCTGGTATGGGTGTTAGTGATACTTTCTTCACCTCCGTTCTGTTTCTGAGTGATTTC
JMSF018G07+           TGTTCTGGTATGGGTGTTAGTGATACTTTCTTCACCTCCGTTCTGTTTCTGAGTGATTTC
                      ____________________________________________________________
consensus             TGTTCTGGTATGGGTGTTAGTGATACTTTCTTCACCTCCGTTCTGTTTCTGAGTGATTTC
 
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rJMSF018G07-          CGTTGAA                                                     
JMFF038D17+           CGTTGAAGAATTCTTCGGCAAAGACGAGAGACTGCGATCTCCAAAATCATAGATGAGAGA
JMSF018G07+           CGTTGAAGAATTCTTCGGCAAAGACGAGAGACTGCGATCTCCAAAATCATAGATGAGAGA
                      ____________________________________________________________
consensus             CGTTGAAGAATTCTTCGGCAAAGACGAGAGACTGCGATCTCCAAAATCATAGATGAGAGA
 
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JMFF038D17+           TCGCAGATGGTTCTGGAAAGCGGAGAGACAGAAATGAAATGGAATGGCTGAAAT      
JMSF018G07+           TCGCAGATGGTTCTGGAAAGCGGAGAGACAGAAATGAAATGGAATGGCTGAAATCGGATC
                      ____________________________________________________________
consensus             TCGCAGATGGTTCTGGAAAGCGGAGAGACAGAAATGAAATGGAATGGCTGAAATCGGATC