Contig 011977:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS063F04Sequence627011977 (3)ref|XP_009606196.1|263PREDICTED: anaphase-promoting complex subunit 2 [Nicotiana tomentosiformis]
JMFS065A04Sequence627011977 (3)ref|XP_009606196.1|263PREDICTED: anaphase-promoting complex subunit 2 [Nicotiana tomentosiformis]
JMSF017P17Sequence300011977 (3)ref|XP_010108697.1|1e-14Anaphase-promoting complex subunit 2 [Morus notabilis] gb|EXC20008.1| Anaphase-p726011297 (2)ref|XP_010320688.1|238PREDICTED: anaphase-promoting complex subunit 2 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS063F04+                                            CTCCAACCTTCCCTTGAAGTACCAGTG
JMFS065A04+                                            CTCCAACCTTCCCTTGAAGTACCAGTG
                      ____________________________________________________________
consensus                                              CTCCAACCTTCCCTTGAAGTACCAGTG
 
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JMFS063F04+           CAGTAACTCAGGAAAATGCCTAGGAAGACTGGCCATAAGAACCGAAGAAACCATTAGCTG
JMFS065A04+           CAGTAACTCAGGAAAATGCCTAGGAAGACTGGCCATAAGAACCGAAGAAACCATTAGCTG
                      ____________________________________________________________
consensus             CAGTAACTCAGGAAAATGCCTAGGAAGACTGGCCATAAGAACCGAAGAAACCATTAGCTG
 
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JMFS063F04+           ATATTTTGAGAAAAGATAGTCTCGTTGGCGATCCATGGTGAGACACCCTTCTGGCGTAAT
JMFS065A04+           ATATTTTGAGAAAAGATAGTCTCGTTGGCGATCCATGGTGAGACACCCTTCTGGCGTAAT
                      ____________________________________________________________
consensus             ATATTTTGAGAAAAGATAGTCTCGTTGGCGATCCATGGTGAGACACCCTTCTGGCGTAAT
 
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JMFS063F04+           CTCTTTGTACGATTGTAAAGCATGAATCAATAACAGTAGGCACTTCTCATGGTATTGCTT
JMFS065A04+           CTCTTTGTACGATTGTAAAGCATGAATCAATAACAGTAGGCACTTCTCATGGTATTGCTT
                      ____________________________________________________________
consensus             CTCTTTGTACGATTGTAAAGCATGAATCAATAACAGTAGGCACTTCTCATGGTATTGCTT
 
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JMFS063F04+           TTCAGATGATATCTCTTCCAAAGCTTTACATAATAGTTGCTGAATCTGATCCTCAAGGAT
JMFS065A04+           TTCAGATGATATCTCTTCCAAAGCTTTACATAATAGTTGCTGAATCTGATCCTCAAGGAT
                      ____________________________________________________________
consensus             TTCAGATGATATCTCTTCCAAAGCTTTACATAATAGTTGCTGAATCTGATCCTCAAGGAT
 
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JMFS063F04+           CGGATCATTTGTCATTTCAAGTGCAGCAACATTTCTGTAAGGATCAAAATGCCTCCAAAA
JMFS065A04+           CGGATCATTTGTCATTTCAAGTGCAGCAACATTTCTGTAAGGATCAAAATGCCTCCAAAA
                      ____________________________________________________________
consensus             CGGATCATTTGTCATTTCAAGTGCAGCAACATTTCTGTAAGGATCAAAATGCCTCCAAAA
 
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JMFS063F04+           CCTCGATGCACCATTTTCTTCAAAGGTTTTCTGAACTGAATGAAGGAAGTGATCTATAAC
JMFS065A04+           CCTCGATGCACCATTTTCTTCAAAGGTTTTCTGAACTGAATGAAGGAAGTGATCTATAAC
                      ____________________________________________________________
consensus             CCTCGATGCACCATTTTCTTCAAAGGTTTTCTGAACTGAATGAAGGAAGTGATCTATAAC
 
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JMFS063F04+           CAGAGAGTTGAGGCCGTGGTTGCAGAGGCAGTGAACATTGGAAATGAGCTCGGAGTTGAG
JMFS065A04+           CAGAGAGTTGAGGCCGTGGTTGCAGAGGCAGTGAACATTGGAAATGAGCTCGGAGTTGAG
JMSF017P17+           CAGAGAGTTGAGGCCGTGGTTGCAGAGGCAGTGAACATTGGAAATGAGCTCGGAGTTGAG
                      ____________________________________________________________
consensus             CAGAGAGTTGAGGCCGTGGTTGCAGAGGCAGTGAACATTGGAAATGAGCTCGGAGTTGAG
 
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JMFS063F04+           GGATAAATCGGCACTGCCTCGGAGTAGAGCTTCCGTAACGGAGCAAAAGCCACTCCAGCT
JMFS065A04+           GGATAAATCGGCACTGCCTCGGAGTAGAGCTTCCGTAACGGAGCAAAAGCCACTCCAGCT
JMSF017P17+           GGATAAATCGGCACTGCCTCGGAGTAGAGCTTCCGTAACGGAGCAAAAGCCACTCCAGCT
                      ____________________________________________________________
consensus             GGATAAATCGGCACTGCCTCGGAGTAGAGCTTCCGTAACGGAGCAAAAGCCACTCCAGCT
 
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JMFS063F04+           CTTCGCAATTGCTTGGACAGAATCTCCGGTGAGAGACTCCAGAATCGCGAAATTGAAGGA
JMFS065A04+           CTTCGCAATTGCTTGGACAGAATCTCCGGTGAGAGACTCCAGAATCGCGAAATTGAAGGA
JMSF017P17+           CTTCGCAATTGCTTGGACAGAATCTCCGGTGAGAGACTCCAGAATCGCGAAATTGAAGGA
                      ____________________________________________________________
consensus             CTTCGCAATTGCTTGGACAGAATCTCCGGTGAGAGACTCCAGAATCGCGAAATTGAAGGA
 
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JMFS063F04+           GGAAGATGAAGTGCTCGTCGCCATTGCAGCGTCATCCATGGATTGTAAACGAAGAATGAA
JMFS065A04+           GGAAGATGAAGTGCTCGTCGCCATTGCAGCGTCATCCATGGATTGTAAACGAAGAATGAA
JMSF017P17+           GGAAGATGAAGTGCTCGTCGCCATTGCAGCGTCATCCATGGATTGTAAACGAAGAATGAA
                      ____________________________________________________________
consensus             GGAAGATGAAGTGCTCGTCGCCATTGCAGCGTCATCCATGGATTGTAAACGAAGAATGAA
 
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JMSF017P17+           CAGAGATTTTGGACAAGGTCACTAAAACCCTATAATTTCATTGGAAATATATTCCGTATC
                      ____________________________________________________________
consensus             CAGAGATTTTGGACAAGGTCACTAAAACCCTATAATTTCATTGGAAATATATTCCGTATC