| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS015G05 | Sequence | 491 | 011975 (3) | gb|AID16053.1| | 1e-50 | putative universal stress protein, partial [Catharanthus roseus] | |||||
| JMSF017H13 | Sequence | 586 | 011975 (3) | ref|XP_009771774.1| | 3e-24 | PREDICTED: U-box domain-containing protein 35-like [Nicotiana sylvestris] ref|X | 741 | 008582 (2) | ref|XP_002510995.1| | 3e-85 | receptor protein kinase, putative [Ricinus communis] gb|EEF51597.1| receptor pro |
| JMSF034N11 | Sequence | 653 | 011975 (3) | ref|XP_009771774.1| | 6e-45 | PREDICTED: U-box domain-containing protein 35-like [Nicotiana sylvestris] ref|X | 724 | 008582 (2) | ref|XP_009588521.1| | 4e-80 | PREDICTED: U-box domain-containing protein 35-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS015G05+ CTATTGCATTTACGATGTTGTCTGATTCGAT
____________________________________________________________
consensus CTATTGCATTTACGATGTTGTCTGATTCGAT
. : . : . : . : . : . :
JMFS015G05+ CTGTTGAACTTCAACCTCAACCTTTCTCTTAGTACACAATGCCTTGTATGGAAGAAGCTT
JMSF034N11+ AACTTCAACCTCAACCTTTCTCCTAGTACACAATGCCTTGTATGGAAGAAGCTT
____________________________________________________________
consensus CTGTTGAACTTCAACCTCAACCTTTCTCTTAGTACACAATGCCTTGTATGGAAGAAGCTT
. : . : . : . : . : . :
JMFS015G05+ TTGAGAAGTTTGCCATTCGATTTCTTTTATGAAAGCAGCTGCAACATCATCGCGTACTTG
JMSF034N11+ TTGAGAAGTTTGCCATTCGATTTCTTTTATGAAAGCAGCTGCAACATCATCGCGTACTTG
JMSF017H13+ ATTCGATTTCTTTTATGAAAGCAGCTGCAACATCATCGCGTACTTG
____________________________________________________________
consensus TTGAGAAGTTTGCCATTCGATTTCTTTTATGAAAGCAGCTGCAACATCATCGCGTACTTG
. : . : . : . : . : . :
JMFS015G05+ TGAAATAGGAATCGAATT-CCCCATGGGAGTTGGAACTGCAGAAATCACAGGTCGAACGT
JMSF034N11+ TGAAATAGGAATCGAATT-CCCCATGGGAGTTGGAACTGCAGAAATCACAGGTCGAACGT
JMSF017H13+ TGAAATAGGAATCGAATTCCCCCATGGGAGTTGGAACTGCAGAAATCACAGGTCGAACGT
____________________________________________________________
consensus TGAAATAGGAATCGAATT-CCCCATGGGAGTTGGAACTGCAGAAATCACAGGTCGAACGT
. : . : . : . : . : . :
JMFS015G05+ GTAAGAGCTTGAAGAGAATCTTCCCTTCTGGAACAAATTTGTCCAGTGCCCAGTTCACTG
JMSF034N11+ GTAAGAGCTTGAAGAGAATCTTCCCTTCTGGAACAAATTTGTCCAGTGCCCAGTTCACTG
JMSF017H13+ GTAAGAGCTTGAAGAGAATCTTCCCTTCTGGAACAAATTTGTCCAGTGCCCAGTTCACTG
____________________________________________________________
consensus GTAAGAGCTTGAAGAGAATCTTCCCTTCTGGAACAAATTTGTCCAGTGCCCAGTTCACTG
. : . : . : . : . : . :
JMFS015G05+ CATATTTGCTTTTCGATTTCCCATTGATAGCTACTGCAACAACCAAAGAGGGCGAAGGGG
JMSF034N11+ CATATTTGCTTTTCGATTTCCCATTGATAGCTACTGCAACAACCAAAGAGGGCGAAGGGG
JMSF017H13+ CATATTTGCTTTTCGATTTCCCATTGATAGCTACTGCAACAACCAAAGAGGGCGAAGGGG
____________________________________________________________
consensus CATATTTGCTTTTCGATTTCCCATTGATAGCTACTGCAACAACCAAAGAGGGCGAAGGGG
. : . : . : . : . : . :
JMFS015G05+ GCATCGCGTTTAGACCATCCATCTCAGACTGCAAAAACTTCTTCTCTGCAAAACTTTATC
JMSF034N11+ GCATCGCGTTTAGACCATCCATCTCAGACTGCAAAAACTTCTTCTCTGCAAAACTTTATC
JMSF017H13+ GCATCGCGTTTAGACCATCCATCTCAGACTGCAAAAACTTCTTCTCTGCAAAACTTTATC
____________________________________________________________
consensus GCATCGCGTTTAGACCATCCATCTCAGACTGCAAAAACTTCTTCTCTGCAAAACTTTATC
. : . : . : . : . : . :
JMFS015G05+ CTCAGGTTTTTATGGATGAAAAATGTCAAGAACCAAGGAATTGCCTGGGTTCTACCAGAG
JMSF034N11+ CTCAGGTTTTTATGGATGAAAAATGTCAAGAACCAAGGAATTGCCTGGGTTCTACCAGAG
JMSF017H13+ CTCAGGTTTTTATGGATGAAAAATGTCAAGAACCAAGGAATTGCCTGGGTTCTACCAGAG
____________________________________________________________
consensus CTCAGGTTTTTATGGATGAAAAATGTCAAGAACCAAGGAATTGCCTGGGTTCTACCAGAG
. : . : . : . : . : . :
JMFS015G05+ GCATTCAAGCAAGAAATGAAGAACACAACATTTTCTCTCTC
JMSF034N11+ GCATTCAAGCAAGAAATGAAGAACACAACATTTTCTCTCTCTAAAAAACAATTCAATGGC
JMSF017H13+ GCATTCAAGCAAGAAATGAAGAACACAACATTTTCTCTCTCTAAAAAACAATTCAATGGC
____________________________________________________________
consensus GCATTCAAGCAAGAAATGAAGAACACAACATTTTCTCTCTCTAAAAAACAATTCAATGGC
. : . : . : . : . : . :
JMSF034N11+ AAAAGAACATGAATTCACACAGTACTATGACTCTATGAGTATATTTAAGGTTGGGTAGCT
JMSF017H13+ AAAAGAACATGAATTCACACAGTACTATGACTCTATGAGTATATTTAAGGTTGGGTAGCT
____________________________________________________________
consensus AAAAGAACATGAATTCACACAGTACTATGACTCTATGAGTATATTTAAGGTTGGGTAGCT
. : . : . : . : . : . :
JMSF034N11+ TCCCAGAAAAGGAGTAAATGTGAGACACACCCCCTATCTTAACTCCCCCAAAGGCTTCAC
JMSF017H13+ TCCCAGAAAAGGAGTAAATGTGAGACACACCCCCTATCTTAACTCCCCCAAAGGCTTCAC
____________________________________________________________
consensus TCCCAGAAAAGGAGTAAATGTGAGACACACCCCCTATCTTAACTCCCCCAAAGGCTTCAC
. : . : . : . : . : . :
JMSF034N11+ TCTTTCAGCTCTCTGAATTCTGATTGGTCTGGAAGGCAAAAACCGTGGCGTAAGACGATC
JMSF017H13+ TCTTTCAGCTCTCTGAATTCTGATTGGTCTGGAAGGCAAAAACCGTGGCGTAAGACGATC
____________________________________________________________
consensus TCTTTCAGCTCTCTGAATTCTGATTGGTCTGGAAGGCAAAAACCGTGGCGTAAGACGATC