Contig 011974:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017G15-                                                 AAAACCGCACAAAAGACCAGC
                      ____________________________________________________________
consensus                                                    AAAACCGCACAAAAGACCAGC
 
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rJMSF017G15-          TTATGCAAAAATGTATTGAAGGCGATCAGGCAGAGGTGGGAGAGAAATTAAGCAAATAAG
                      ____________________________________________________________
consensus             TTATGCAAAAATGTATTGAAGGCGATCAGGCAGAGGTGGGAGAGAAATTAAGCAAATAAG
 
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rJMSF017G15-          AGACCGGATAGCTTAACCAGTTAGAGCAGAGTTAAGAGCACTGTGTACATCCACTCCAAT
                      ____________________________________________________________
consensus             AGACCGGATAGCTTAACCAGTTAGAGCAGAGTTAAGAGCACTGTGTACATCCACTCCAAT
 
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rJMSF017G15-          TTGGGCTTCAGCTTTCTCTATATCGGTTGATGCAGAGTTTAGCTTCTGTGTGAACTCGGT
                      ____________________________________________________________
consensus             TTGGGCTTCAGCTTTCTCTATATCGGTTGATGCAGAGTTTAGCTTCTGTGTGAACTCGGT
 
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rJMSF017G15-          AAGACCCTTTTGGACCAAATTTGCATCAATATGATCAAGGGGCACAGCTTCAACGGCAAT
JMSF017G15+                                             TCAAGGGGCACAGCTTCAACGGCAAT
                      ____________________________________________________________
consensus             AAGACCCTTTTGGACCAAATTTGCATCAATATGATCAAGGGGCACAGCTTCAACGGCAAT
 
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rJMSF017G15-          TATATCCGCAATCGAATTTGCGTGAATAAATGCAAATCCACCGCTCAGAAAGTACTTGGT
JMSF017G15+           TATATCCGCAATCGAATTTGCGTGAATAAATGCAAATCCACCGCTCAGAAAGTACTTGGT
                      ____________________________________________________________
consensus             TATATCCGCAATCGAATTTGCGTGAATAAATGCAAATCCACCGCTCAGAAAGTACTTGGT
 
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rJMSF017G15-          CACGTCGTTGCCTTCATGAACTGACATGACTCCAGGCTTTAGCTCAGCTACTGTGGCCAC
JMSF017G15+           CACGTCGTTGCCTTCATGAACTGACATGACTCCAGGCTTTAGCTCAGCTACTGTGGCCAC
                      ____________________________________________________________
consensus             CACGTCGTTGCCTTCATGAACTGACATGACTCCAGGCTTTAGCTCAGCTACTGTGGCCAC
 
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rJMSF017G15-          ATGCCCAGGAAGAACACCCATCTGTCCGGTATTTGCAGGGATTATGACCATGTCAACCTC
JMSF017G15+           ATGCCCAGGAAGAACACCCATCTGTCCGGTATTTGCAGGGATTATGACCATGTCAACCTC
                      ____________________________________________________________
consensus             ATGCCCAGGAAGAACACCCATCTGTCCGGTATTTGCAGGGATTATGACCATGTCAACCTC
 
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rJMSF017G15-          TTTACCGGCGAGTTCAGAGGAGTAAGGAAGGGCAAAGTTGACAGTGAGCTTGGAAGGGAA
JMSF017G15+           TTTACCGGCGAGTTCAGAGGAGTAAGGAAGGGCAAAGTTGACAGTGAGCTTGGAAGGGAA
                      ____________________________________________________________
consensus             TTTACCGGCGAGTTCAGAGGAGTAAGGAAGGGCAAAGTTGACAGTGAGCTTGGAAGGGAA
 
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rJMSF017G15-          GGAGGACGGGGTGGCGGGGCGAGGGGCCATGTAGGCAGACGGAGTCTGGGGTGGGTCCAC
JMSF017G15+           GGAGGACGGGGTGGCGGGGCGAGGGGCCATGTAGGCAGACGGAGTCTGGGGTGGGTCCAC
                      ____________________________________________________________
consensus             GGAGGACGGGGTGGCGGGGCGAGGGGCCATGTAGGCAGACGGAGTCTGGGGTGGGTCCAC
 
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rJMSF017G15-          GTTTGGGATTGTTTTCTTCCAGGCCTCAACGAAAGTAGCATCCGC               
JMSF017G15+           GTTTGGGATTGTTTTCTTCCAGGCCTCAACGAAAGTAGCATCCGCCGTCAGTTCGGTAGA
                      ____________________________________________________________
consensus             GTTTGGGATTGTTTTCTTCCAGGCCTCAACGAAAGTAGCATCCGCCGTCAGTTCGGTAGA
 
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JMSF017G15+           GAAGGGGCGGCGCCATCTGATAGCGTTGGCTCGGGCTAGAATTCGAGACGTGTGGCGGAA
                      ____________________________________________________________
consensus             GAAGGGGCGGCGCCATCTGATAGCGTTGGCTCGGGCTAGAATTCGAGACGTGTGGCGGAA
 
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JMSF017G15+           CATGGCGGAGGAATCCGGCGACGGCGACGGCGAGCGGTACAATCTGGAAAATGAAGATCC
                      ____________________________________________________________
consensus             CATGGCGGAGGAATCCGGCGACGGCGACGGCGAGCGGTACAATCTGGAAAATGAAGATCC