Contig 011972:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+                           TTTCGCTGTTTCTCCCTGCATCTTCTATTCTGAAACCAAACTTT
                      ____________________________________________________________
consensus                             TTTCGCTGTTTCTCCCTGCATCTTCTATTCTGAAACCAAACTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           GATCTGTTTTGGCTCGATATTGGAAAGAATTGAACACTCCCTGATGAGCTGCTGCCTGCG
                      ____________________________________________________________
consensus             GATCTGTTTTGGCTCGATATTGGAAAGAATTGAACACTCCCTGATGAGCTGCTGCCTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           AAGCGAACTTGGCTTTGGACATTCATGATACAGCCTCTCCAGAGCCTCGATCTGCTCCGG
                      ____________________________________________________________
consensus             AAGCGAACTTGGCTTTGGACATTCATGATACAGCCTCTCCAGAGCCTCGATCTGCTCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           TGTGTACCGCACATATTTCCCATTGTCCAATCCCATTTTCCCACTCTCTTTACAGCTCGA
JMSF016N17+                                                       TCTCTTTACAGCTCGA
                      ____________________________________________________________
consensus             TGTGTACCGCACATATTTCCCATTGTCCAATCCCATTTTCCCACTCTCTTTACAGCTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           TGTCACCGCCATCATCACTTAATTACTTCCAAAATCAAACATCAACAATATTTCTTTTCA
JMSF016N17+           TGTCACCGCCATCATCACTTAATTACTTCCAAAATCAAACATCAACAATATTTCTTTTCA
                      ____________________________________________________________
consensus             TGTCACCGCCATCATCACTTAATTACTTCCAAAATCAAACATCAACAATATTTCTTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           TTCAACCAAAATTTGTAGCTTTAACTCACCAATTGAAACTACCTTGGTTAAGTTTCTATA
JMSF016N17+           TTCAACCAAAATTTGTAGCTTTAACTCACCAATTGAAACTACCTTGGTTAAGTTTCTATA
                      ____________________________________________________________
consensus             TTCAACCAAAATTTGTAGCTTTAACTCACCAATTGAAACTACCTTGGTTAAGTTTCTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           TTATCCCCAGAAAAACCCTAGAAAACAACAAGACACCACAACTATCTTCCTTTCCAAGGA
JMSF016N17+           TTATCCCCAGAAAAACCCTAGAAAACAACAAGACACCACAACTATCTTCCTTTCCAAGGA
                      ____________________________________________________________
consensus             TTATCCCCAGAAAAACCCTAGAAAACAACAAGACACCACAACTATCTTCCTTTCCAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           CTAATTTGAATAAACTATACTAAATCATATATAGATATACTACGAGTTTCAGCTTGTTTA
JMSF016N17+           CTAATTTGAATAAACTATACTAAATCATATATAGATATACTACGAGTTTCAGCTTGTTTA
                      ____________________________________________________________
consensus             CTAATTTGAATAAACTATACTAAATCATATATAGATATACTACGAGTTTCAGCTTGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           TTTATATACTAAAGATAAATAACCCACGTAAAACTTTTTTGTTTTTTGAATGAAGTCCCA
JMSF016N17+           TTTATATACTAAAGATAAATAACCCACGTAAAACTTTTTTGTTTTTTGAATGAAGTCCCA
                      ____________________________________________________________
consensus             TTTATATACTAAAGATAAATAACCCACGTAAAACTTTTTTGTTTTTTGAATGAAGTCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           ACATCCATGTATAGATAAGAACACAGTTGAAGCTTGTGTGTGAAGCATGGAAACTTTCAA
JMSF016N17+           ACATCCATGTATAGATAAGAACACAGTTGAAGCTTGTGTGTGAAGCATGGAAACTTTCAA
                      ____________________________________________________________
consensus             ACATCCATGTATAGATAAGAACACAGTTGAAGCTTGTGTGTGAAGCATGGAAACTTTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012E07+           ACACTTAAAAATCAAGAAATGTAC                                    
JMSF016N17+           ACACTTAAAAATCAAGAAATGTACAAAAAAAGTAAAATAAACCACAGACAAAGATACACC
                      ____________________________________________________________
consensus             ACACTTAAAAATCAAGAAATGTACAAAAAAAGTAAAATAAACCACAGACAAAGATACACC