Contig 011969:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007K16+                                     CAACAGCCTCAAACCCTAGATTTCCCCACACAG
                      ____________________________________________________________
consensus                                        CAACAGCCTCAAACCCTAGATTTCCCCACACAG
 
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rJMSF007K16+          TCTGCTAGTGGTGGGATTGGTGGAATCGGCCTAGGCAACACTGTCAATANTGATTTCTGC
                      ____________________________________________________________
consensus             TCTGCTAGTGGTGGGATTGGTGGAATCGGCCTAGGCAACACTGTCAATANTGATTTCTGC
 
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rJMSF007K16+          TCTTCTTGCTCTTACAGAGGTACTGCTGTGACAATGAAAAACATGTTGGAAACTCAGTTT
                      ____________________________________________________________
consensus             TCTTCTTGCTCTTACAGAGGTACTGCTGTGACAATGAAAAACATGTTGGAAACTCAGTTT
 
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rJMSF007K16+          CCTGGCATTCATGTTGTTCTTGCGAACTACCCTGCTCCATTTCCAAAACGTGTGCTAAGC
                      ____________________________________________________________
consensus             CCTGGCATTCATGTTGTTCTTGCGAACTACCCTGCTCCATTTCCAAAACGTGTGCTAAGC
 
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rJMSF016G10+                                          TGGTATTATAATGGCTGGTGATCAAATT
rJMSF007K16+          CAACTGGTTCCCATTGTTCAGTTTAGCGTTATTGGTATTATAATGGCTGGTGATCAAATT
JMSF016G10-                                           TGGTATTATAATGGCTGGTGATCAAATT
                      ____________________________________________________________
consensus             CAACTGGTTCCCATTGTTCAGTTTAGCGTTATTGGTATTATAATGGCTGGTGATCAAATT
 
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rJMSF016G10+          TTTCCAAGGTTGGGTTTTGCTGTTCCTCCTCCATGGTATTACAACTTGCGTGCAAATAGA
rJMSF007K16+          TTTCCAAGGTTGGGNTTTGCTGTTCCTCCTCCATGGTATTACAACTTGCGTGCAAATAGA
JMSF016G10-           TTTCCAAGGTTGGGTTTTGCTGTTCCTCCTCCATGGTATTACAACTTGCGTGCAAATAGA
                      ____________________________________________________________
consensus             TTTCCAAGGTTGGGTTTTGCTGTTCCTCCTCCATGGTATTACAACTTGCGTGCAAATAGA
 
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rJMSF016G10+          TTTGGATCTATGGCAAGCACTTGGCTTCTAGGAAACTTCCTTCAATCAATGCTGCAGAGT
rJMSF007K16+          TTTGGATCTATGGCAAGCACTTGGCTTCTAGGAAACTTCCTTCAATCAATGCTGCAGAGT
JMSF016G10-           TTTGGATCTATGGCAAGCACTTGGCTTCTAGGAAACTTCCTTCAATCAATGCTGCAGAGT
                      ____________________________________________________________
consensus             TTTGGATCTATGGCAAGCACTTGGCTTCTAGGAAACTTCCTTCAATCAATGCTGCAGAGT
 
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rJMSF016G10+          TCTGGTGCATTCGAAGTGTCTTGTAATGGCGAACTGGTTTTCTCCAAGCTTAAGGAGAAG
rJMSF007K16+          TCTGGTGCATTCGAAGTGTCTTGTAATGGCGAACTGGTTTTCTCCAAGCTTAAGGAGAAG
JMSF016G10-           TCTGGTGCATTCGAAGTGTCTTGTAATGGCGAACTGGTTTTCTCCAAGCTTAAGGAGAAG
                      ____________________________________________________________
consensus             TCTGGTGCATTCGAAGTGTCTTGTAATGGCGAACTGGTTTTCTCCAAGCTTAAGGAGAAG
 
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rJMSF016G10+          AGGTTTCCTGGCGAAATTGAGTTGAAAGATCTTGTTGGCAGAAGAATTGCAAATGTAAGG
rJMSF007K16+          AGGTTTCCTGGCGAAATTGAGTTGAAAGATCTTGTTGGCAGAAGAATTGCAAATGTAAGG
JMSF016G10-           AGGTTTCCTGGCGAAATTGAGTTGAAAGATCTTGTTGGCAGAAGAATTGCAAATGTAAGG
                      ____________________________________________________________
consensus             AGGTTTCCTGGCGAAATTGAGTTGAAAGATCTTGTTGGCAGAAGAATTGCAAATGTAAGG
 
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rJMSF016G10+          GCGACAGATGATTTTCTATTGAACTCTCGAAGGGGATAATTTTTATTTCACACATTGTAG
rJMSF007K16+          GCGACAGATGATTTTCTATTGAACTCTCGAAGGGGATAATTTTTATTTCACACATTGTAG
JMSF016G10-           GCGACAGATGATTTTCTATTGAACTCTCGAAGGGGATAATTTTTATTTCACACATTGTAG
                      ____________________________________________________________
consensus             GCGACAGATGATTTTCTATTGAACTCTCGAAGGGGATAATTTTTATTTCACACATTGTAG
 
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rJMSF016G10+          AAGGAAAAAAATGTTGTTTTAGCATACGTATAATTCCTTGTTTTTGCAGTTTACTTTTGA
rJMSF007K16+          AAGGAAAAAAATGTTGTTTTAGCATATGTATAATTCCTTGTTTTTGCAGTTTACTTTTGA
JMSF016G10-           AAGGAAAAAAATGTTGTTTTAGCATACGTATAATTCCTTGTTTTTGCAGTTTACTTTTGA
                      ____________________________________________________________
consensus             AAGGAAAAAAATGTTGTTTTAGCATACGTATAATTCCTTGTTTTTGCAGTTTACTTTTGA
 
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rJMSF016G10+          GTTGAGTTGTTATGGTCCAATGCACCTTTTGTAAATTTAGACACTTTTTAACTGCTACAT
rJMSF007K16+          GCTGAGTTGNTANGGTCCAATGCACCTTTTGTAAATTTAGACACTTTTTAACTGCTACAT
JMSF016G10-           GTTGAGTTGTTATGGTCCAATGCACCTTTTGTAAATTTAGACACTTTTTAACTGCTACAT
                      ____________________________________________________________
consensus             GTTGAGTTGTTATGGTCCAATGCACCTTTTGTAAATTTAGACACTTTTTAACTGCTACAT
 
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rJMSF016G10+          TCACAAGTTCATAAGT                                            
rJMSF007K16+          TCACAAGTTCATAAGTTGTCATAGTACCTAATGCTGAATCTTCTCTA             
JMSF016G10-           TCACAAGTTCATAAGTTGTCATAGTACCTAATGCTGAATCTTCTCTAGTTCTTTCTCATA
                      ____________________________________________________________
consensus             TCACAAGTTCATAAGTTGTCATAGTACCTAATGCTGAATCTTCTCTAGTTCTTTCTCATA