Contig 011966:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016D03-                         ATATCATAGGANAATTTTCCAGGCGTTTCGACTATTATATAAAAA
                      ____________________________________________________________
consensus                            ATATCATAGGANAATTTTCCAGGCGTTTCGACTATTATATAAAAA
 
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rJMSF016D03-          AAAAGAGGGTATAAATAAAATAAAAATAATTTCAAAGTAAACTGACCAAGATGACTAAGT
rJMFF029L07-                     TAAATAAAATAAAAATAATTTCAAAGTAAACTGACCAAGATGACTAAGT
                      ____________________________________________________________
consensus             AAAAGAGGGTATAAATAAAATAAAAATAATTTCAAAGTAAACTGACCAAGATGACTAAGT
 
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rJMSF016D03-          CATATCATACATATACAACCCATGAAAACATGTAAATATGTATAGAAAGAGAGAAAATAT
rJMFF029L07-          CATATCATACATATACAACCCATGAAAACATGTAAATATGTATAGAAAGAGAGAAAATAT
                      ____________________________________________________________
consensus             CATATCATACATATACAACCCATGAAAACATGTAAATATGTATAGAAAGAGAGAAAATAT
 
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rJMSF016D03-          ATATATGTGATCAGGGTGCAGGGAGGAGGGCAGTGAGGGCAACAGAGATGGCAAAGAGAA
rJMFF029L07-          ATATATGTGATCAGGGTGCAGGGAGGAGGGCAGTGAGGGCAACAGAGATGGCAAAGAGAA
                      ____________________________________________________________
consensus             ATATATGTGATCAGGGTGCAGGGAGGAGGGCAGTGAGGGCAACAGAGATGGCAAAGAGAA
 
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rJMSF016D03-          GGATGAGCAAACCAGTGAAGTTGATGACTAATCCTTCTTGGCTGTGCTTTGTGAGTTGCA
rJMFF029L07-          GGATGAGCAAACCAGTGAAGTTGATGACTAATCCTTCTTGGCTGTGCTTTGTGAGTTGCA
                      ____________________________________________________________
consensus             GGATGAGCAAACCAGTGAAGTTGATGACTAATCCTTCTTGGCTGTGCTTTGTGAGTTGCA
 
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rJMSF016D03-          AGAAAATGAATTTCTCAGTCAAGCCTGTGAGTGCTGCAATGGTTGCCATTGAGAAGATGA
rJMFF029L07-          AGAAAATGAATTTCTCAGTCAAGCCTGTGAGTGCTGCAATGGTTGCCATTGAGAAGATGA
                      ____________________________________________________________
consensus             AGAAAATGAATTTCTCAGTCAAGCCTGTGAGTGCTGCAATGGTTGCCATTGAGAAGATGA
 
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rJMSF016D03-          TGATCCCTAGAAGAGCATGCCATGGTGCAATCTTTGCCCTTGTTGAGCTCCTTGCTCTTG
rJMFF029L07-          TGATCCCTAGAAGAGCATGCCATGGTGCAATCTTTGCCCTTGTTGAGCTCCTTGCTCTTG
                      ____________________________________________________________
consensus             TGATCCCTAGAAGAGCATGCCATGGTGCAATCTTTGCCCTTGTTGAGCTCCTTGCTCTTG
 
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rJMSF016D03-          GGAACATGAAGGTCAAGAAGGACAAAACCCACTGGATACCAAACAAAGAGATGGTGGAAA
rJMFF029L07-          GGAACATGAAGGTCAAGAAGGACAAAACCCACTGGATACCAAACAAAGAGATGGTGGAAA
                      ____________________________________________________________
consensus             GGAACATGAAGGTCAAGAAGGACAAAACCCACTGGATACCAAACAAAGAGATGGTGGAAA
 
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rJMSF016D03-          TCCCAATCCATGAATGCAAGGTATATACATGTGGAATTTTGGCCTCATGATGAAACTTGA
rJMFF029L07-          TCCCAATCCATGAATGCAAGGTATATACATGTGGAATTTTGGCCTCATGATGAAACTTGA
                      ____________________________________________________________
consensus             TCCCAATCCATGAATGCAAGGTATATACATGTGGAATTTTGGCCTCATGATGAAACTTGA
 
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rJMSF016D03-          AGACTGCATAAACCCCCACAATCCCAAGAACAAGAGCTATCAAGTGCAGAATCATGTGAA
rJMFF029L07-          AGACTGCATAAACCCCCACAATCCCAAGAACAAGAGCTATCAAGTGCAGAATCATGTGAA
JMFF029L07+             ACTGCATAAACCCCCACAATCCCAAGAACAAGAGCTATCAAGTGCAGAATCATGTGAA
                      ____________________________________________________________
consensus             AGACTGCATAAACCCCCACAATCCCAAGAACAAGAGCTATCAAGTGCAGAATCATGTGAA
 
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rJMSF016D03-          CCACTTTCTGCCTCTTACTTGATGATGGCACTGTCGCATATGCCATTATACCTTCCCCAG
rJMFF029L07-          CCACTTTCTGCCTCTTACTTGATGATGGCACTGTCGCATATGCCATTATACCTTCCCCAG
JMFF029L07+           CCACTTTCTGCCTCTTACTTGATGATGGCACTGTCGCATATGCCATTATACCTTCCCCAG
JMSF016D03+                                          TGTCGCATATGCCATTATACCTTCCCCAG
                      ____________________________________________________________
consensus             CCACTTTCTGCCTCTTACTTGATGATGGCACTGTCGCATATGCCATTATACCTTCCCCAG
 
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rJMSF016D03-          ACACCAAGATGAACCCAATCACCATAAGCAGAGGATGAACATTGAAAATCTTGGGTTTGT
rJMFF029L07-          ACACCAAGATGAACCCAATCACCATAAGCAGAGGATGAACATTGAAAATCTTGGGTTTGT
JMFF029L07+           ACACCAAGATGAACCCAATCACCATAAGCAGAGGATGAACATTGAAAATCTTGGGTTTGT
JMSF016D03+           ACACCAAGATGAACCCAATCACCATAAGCAGAGGATGAACATTGAAAATCTTGGGTTTGT
                      ____________________________________________________________
consensus             ACACCAAGATGAACCCAATCACCATAAGCAGAGGATGAACATTGAAAATCTTGGGTTTGT
 
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rJMSF016D03-          TGAGGGAGCGGAACGCCACG                                        
rJMFF029L07-          TGAGGGAGCGGAACGCCACGCCTTCCCGGAAGTGGAGCAGCCATACAAGGACCATGGTGA
JMFF029L07+           TGAGGGAGCGGAACGCCACGCCTTCCCGGAAGTGGAGCAGCCATACAAGGACCATGGTGA
JMSF016D03+           TGAGGGAGCGGAACGCCACGCCTTCCCGGAAGTGGAGCAGCCATACAAGGACCATGGTGA
                      ____________________________________________________________
consensus             TGAGGGAGCGGAACGCCACGCCTTCCCGGAAGTGGAGCAGCCATACAAGGACCATGGTGA
 
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rJMFF029L07-          ATATGGCTATGAACAGCAAATGAGCAAGCA                              
JMFF029L07+           ATATGGCTATGAACAGCAAATGAGCAAGCATAGTTGCAGGCAGCGCCGACGCGGCTTTGA
JMSF016D03+           ATATGGCTATGAACAGCAAATGAGCAAGCAGAGTTGCAGGCAGCGCCGACGCGGCTTTGA
                      ____________________________________________________________
consensus             ATATGGCTATGAACAGCAAATGAGCAAGCATAGTTGCAGGCAGCGCCGACGCGGCTTTGA
 
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JMFF029L07+           AGCTGGAGCTGCTTTGTTTCGCCATGGCTATACCGACACCCTAAACTGTTCTCTTCTCGG
JMSF016D03+           AGCTGGAGCTGCTTTGTTTCGCCATGGCTATACCGACACCCTAAACTGTTCTCTTCTCGG
                      ____________________________________________________________
consensus             AGCTGGAGCTGCTTTGTTTCGCCATGGCTATACCGACACCCTAAACTGTTCTCTTCTCGG
 
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JMFF029L07+           ATATATAGCTAATTAAGGC                                         
JMSF016D03+           ATATATAGCTAATTAAGGCAGAGAGGAAGTGAAGTCTGAAGAGAGATAATTAAATACATC
                      ____________________________________________________________
consensus             ATATATAGCTAATTAAGGCAGAGAGGAAGTGAAGTCTGAAGAGAGATAATTAAATACATC