Contig 011960:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015D01Sequence414011960 (2)ref|XP_009625610.1|4e-37PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [816004228 (2)ref|XP_009800822.1|3e-136PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Nicot
JMSF051L09Sequence722011960 (2)ref|XP_009625610.1|2e-110PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [760004228 (2)ref|XP_009800822.1|5e-126PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Nicot

Alignment

This contig is upended


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JMSF051L09+                                                                     TT
                      ____________________________________________________________
consensus                                                                       TT
 
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JMSF051L09+           CAAAGAATATGCAGCACCAACAGCGTGGGGAATTTGTGTAGCAACAGTTGATGCGACGGT
                      ____________________________________________________________
consensus             CAAAGAATATGCAGCACCAACAGCGTGGGGAATTTGTGTAGCAACAGTTGATGCGACGGT
 
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JMSF051L09+           GAAGTAATTGTGTTTATTAGATCCATAATGGATAGGCATCTGCCTGCCTTTTCCATTATC
                      ____________________________________________________________
consensus             GAAGTAATTGTGTTTATTAGATCCATAATGGATAGGCATCTGCCTGCCTTTTCCATTATC
 
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JMSF051L09+           ATCTTTATTCCCAAAGCACTGGTTCGCAAATTCCTGTAGAGTGAATCCCCTCCATATCAG
                      ____________________________________________________________
consensus             ATCTTTATTCCCAAAGCACTGGTTCGCAAATTCCTGTAGAGTGAATCCCCTCCATATCAG
 
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JMSF051L09+           AACTCCGGGCTCCCTGTACTGAGGAAAGATGAAATCATCCATGTGAAGTGCTGCAGCTGA
                      ____________________________________________________________
consensus             AACTCCGGGCTCCCTGTACTGAGGAAAGATGAAATCATCCATGTGAAGTGCTGCAGCTGA
 
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JMSF051L09+           TGCAATATTGATGGCCTCTTCTCCAATCGTTGTAACATAGAACGATATTCTTCCTTGTCT
                      ____________________________________________________________
consensus             TGCAATATTGATGGCCTCTTCTCCAATCGTTGTAACATAGAACGATATTCTTCCTTGTCT
 
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JMSF051L09+           TTGTGCTTCGTAGAAAATGGTATCCATAGTTTGAAGTGTGATCATATCGGTATACATTTT
JMSF015D01+                 TTCGTAGAAAATGGTATCCATAGTTTGAAGTGTGATCATATCGGTATACATTTT
                      ____________________________________________________________
consensus             TTGTGCTTCGTAGAAAATGGTATCCATAGTTTGAAGTGTGATCATATCGGTATACATTTT
 
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JMSF051L09+           CACAGCAACCTTCTTGTCAATCTTCACAAAATTGTTAGTGATGGGGAAACCATCATCATT
JMSF015D01+           CACAGCAACCTTCTTGTCAATCTTCACAAAATTGTTAGTGATGGGGAAACCATCATCATT
                      ____________________________________________________________
consensus             CACAGCAACCTTCTTGTCAATCTTCACAAAATTGTTAGTGATGGGGAAACCATCATCATT
 
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JMSF051L09+           GAGGACACGGTAGCAGTGAATCCTTTCATCATGAGTTTCAGAAATAAATTTCATATGGGA
JMSF015D01+           GAGGACACGGTAGCAGTGAATCCTTTCATCATGAGTTTCAGAAATAAATTTCATATGGGA
                      ____________________________________________________________
consensus             GAGGACACGGTAGCAGTGAATCCTTTCATCATGAGTTTCAGAAATAAATTTCATATGGGA
 
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JMSF051L09+           GGTGAATTTAACCTTCCCTCCAGGGAAATCCAGGACCTCCAAATCATCAGGACTCTCAGC
JMSF015D01+           GGTGAATTTAACCTTCCCTCCAGGGAAATCCAGGACCTCCAAATCATCAGGACTCTCAGC
                      ____________________________________________________________
consensus             GGTGAATTTAACCTTCCCTCCAGGGAAATCCAGGACCTCCAAATCATCAGGACTCTCAGC
 
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JMSF051L09+           GGGTTCAGCTCGGGTTGATTCAAAACGGCGAGAGGTTAAAAAAGCAGGACCAAAGCGCGG
JMSF015D01+           GGGTTCAGCTCGGGTTGATTCAAAACGGCGAGAGGTTAAAAAAGCAGGACCAAAGCGCGG
                      ____________________________________________________________
consensus             GGGTTCAGCTCGGGTTGATTCAAAACGGCGAGAGGTTAAAAAAGCAGGACCAAAGCGCGG
 
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JMSF051L09+           AATCGCGGACGGAATTAGTGTCCGACGAAGAAGACCACCCAGTGTTGAGCTTAGAAGGTT
JMSF015D01+           AATCGCGGACGGAATTAGTGTCCGACGAAGAAGACCACCCAGTGTTGAGCTTAGAAGGTT
                      ____________________________________________________________
consensus             AATCGCGGACGGAATTAGTGTCCGACGAAGAAGACCACCCAGTGTTGAGCTTAGAAGGTT
 
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JMSF051L09+           AGGAATCAATGTTTTGGATTTGGAGAAGGAGGAAGCCATGCATACAGATAGATAGATAGC
JMSF015D01+           AGGAATCAATGTTTTGGATTTGGAGAAGGAGGAAGCCATGCATACAGATAGATAGATAGC
                      ____________________________________________________________
consensus             AGGAATCAATGTTTTGGATTTGGAGAAGGAGGAAGCCATGCATACAGATAGATAGATAGC