Contig 011957:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS018H04Sequence617011957 (5)ref|XP_006338039.1|2e-96PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero
JMFS064G06Sequence622011957 (5)ref|XP_009775031.1|6e-74PREDICTED: BEACH domain-containing protein lvsC isoform X3 [Nicotiana sylvestri
JMFS136F09Sequence612011957 (5)ref|XP_006338039.1|1e-83PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero
JMFS153F08Sequence625011957 (5)ref|XP_006338039.1|5e-106PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero
JMSF014C01Sequence377011957 (5)ref|XP_009613073.1|1e-69PREDICTED: BEACH domain-containing protein lvsC isoform X1 [Nicotiana tomentosi777014988ref|XP_009613074.1|3e-83PREDICTED: BEACH domain-containing protein lvsC isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS064G06+                                                                   GACA
                      ____________________________________________________________
consensus                                                                     GACA
 
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JMFS064G06+           GCCTTTACCTTAGAGATGATCCATCTTCTATGGCGCTTGATATTGTTGGGATTCTTNTGA
                      ____________________________________________________________
consensus             GCCTTTACCTTAGAGATGATCCATCTTCTATGGCGCTTGATATTGTTGGGATTCTTNTGA
 
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JMFS064G06+           GCATTCCCACATAATGCACTTATGCTATCAATAGCTCTTCCTCTTTCAGAATCCAGATCA
                      ____________________________________________________________
consensus             GCATTCCCACATAATGCACTTATGCTATCAATAGCTCTTCCTCTTTCAGAATCCAGATCA
 
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JMFS064G06+           AGACTGATGGCCCATTTAAAAATATTCTGCTTCTGGCTTCCACCTACCTGATCAGGCTTG
                      ____________________________________________________________
consensus             AGACTGATGGCCCATTTAAAAATATTCTGCTTCTGGCTTCCACCTACCTGATCAGGCTTG
 
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JMFS064G06+           CTCAGATCAAACATACCTGAAGAGTCAAAGTTTTTGAAGACAGATGATCCTCCAGTGCCT
                      ____________________________________________________________
consensus             CTCAGATCAAACATACCTGAAGAGTCAAAGTTTTTGAAGACAGATGATCCTCCAGTGCCT
 
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JMFS064G06+           TCCACTAAAAATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
JMFS136F09+                     ATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
                      ____________________________________________________________
consensus             TCCACTAAAAATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
 
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JMFS064G06+           AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
JMFS136F09+           AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
                      ____________________________________________________________
consensus             AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
 
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JMFS064G06+           GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
JMFS136F09+           GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
                      ____________________________________________________________
consensus             GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
 
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JMFS064G06+           ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
JMFS136F09+           ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
                      ____________________________________________________________
consensus             ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
 
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JMFS064G06+           GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
JMFS136F09+           GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
JMFS018H04+                                                                  TCCCT
                      ____________________________________________________________
consensus             GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
 
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JMFS064G06+           TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
JMFS136F09+           TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
JMFS018H04+           TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
                      ____________________________________________________________
consensus             TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
 
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JMFS064G06+           TTGGCAAGAGAAAGGGCG                                          
JMFS136F09+           TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
JMFS018H04+           TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
                      ____________________________________________________________
consensus             TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
 
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JMFS136F09+           TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
JMFS018H04+           TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
JMFS153F08+                              TCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
                      ____________________________________________________________
consensus             TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
 
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JMFS136F09+           AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
JMFS018H04+           AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
JMFS153F08+           AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
                      ____________________________________________________________
consensus             AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
 
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JMFS136F09+           TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
JMFS018H04+           TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
JMFS153F08+           TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
                      ____________________________________________________________
consensus             TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
 
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JMFS136F09+           TTAGATAATTGGAAAGAATCCC                                      
JMFS018H04+           TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
JMFS153F08+           TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
                      ____________________________________________________________
consensus             TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
 
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JMFS018H04+           CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
JMFS153F08+           CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
                      ____________________________________________________________
consensus             CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
 
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JMFS018H04+           AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
JMFS153F08+           AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
                      ____________________________________________________________
consensus             AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
 
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JMFS018H04+           TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
JMFS153F08+           TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
                      ____________________________________________________________
consensus             TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
 
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JMFS018H04+           CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
JMFS153F08+           CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
JMSF014C01+                                                      TGCCAACAATACTTGTA
                      ____________________________________________________________
consensus             CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
 
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JMFS018H04+           GCTAACATTGAC                                                
JMFS153F08+           GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
JMSF014C01+           GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
                      ____________________________________________________________
consensus             GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
 
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JMFS153F08+           CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
JMSF014C01+           CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
                      ____________________________________________________________
consensus             CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
 
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JMFS153F08+           AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAG                
JMSF014C01+           AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAGGCAGGGTAGAAGGGGG
                      ____________________________________________________________
consensus             AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAGGCAGGGTAGAAGGGGG
 
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JMSF014C01+           ATGACCTGTTGAACACATCGAGATGCTCTTTCAAGGGATGATTTACAAAGATAGAGGATC
                      ____________________________________________________________
consensus             ATGACCTGTTGAACACATCGAGATGCTCTTTCAAGGGATGATTTACAAAGATAGAGGATC
 
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JMSF014C01+           ATCAGTCGAAAAACAATTTTAGGACATTTCTCCCCTCTTAGAAGCATAGCTTTGTCAACA
                      ____________________________________________________________
consensus             ATCAGTCGAAAAACAATTTTAGGACATTTCTCCCCTCTTAGAAGCATAGCTTTGTCAACA
 
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JMSF014C01+           GGTTTATTTGGTTTTCCAGCCAAAGCATTGCCAATTCCACCAGATACAACAACAGCAGCC
                      ____________________________________________________________
consensus             GGTTTATTTGGTTTTCCAGCCAAAGCATTGCCAATTCCACCAGATACAACAACAGCAGCC