| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035D08 | Sequence | 558 | 011951 (6) | ref|XP_009766819.1| | 2e-70 | PREDICTED: cystinosin homolog [Nicotiana sylvestris] | 677 | 011951 (6) | ref|XP_009596113.1| | 2e-23 | PREDICTED: cystinosin homolog [Nicotiana tomentosiformis] |
| JMSF013F07 | Sequence | 312 | 011951 (6) | ref|XP_010315946.1| | 6e-43 | PREDICTED: cystinosin homolog isoform X3 [Solanum lycopersicum] | 760 | 011951 (6) | ref|XP_009596113.1| | 1e-100 | PREDICTED: cystinosin homolog [Nicotiana tomentosiformis] |
| JMSF039J19 | Sequence | 684 | 011951 (6) | ref|XP_009596113.1| | 5e-120 | PREDICTED: cystinosin homolog [Nicotiana tomentosiformis] | 785 | 011951 (6) | ref|XP_009596113.1| | 4e-33 | PREDICTED: cystinosin homolog [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF035D08- TTGATGTTTCTTTCC
____________________________________________________________
consensus TTGATGTTTCTTTCC
. : . : . : . : . : . :
rJMFF035D08- ATACAGAATTGAGCCAGTTCCTTGATCACTCTACCGAATCACATATGGCTACAATTCAGT
rJMSF039J19- ATACAGAATTGAGCCAGTTCCTTGATCACTCTACCGAATCACATATGGCTACAATTCAGT
____________________________________________________________
consensus ATACAGAATTGAGCCAGTTCCTTGATCACTCTACCGAATCACATATGGCTACAATTCAGT
. : . : . : . : . : . :
rJMFF035D08- GCTGAGATACATCAAAATTGCAGCATGACAAGGGATATTCTTCCCAGCTACATCCTCTCT
rJMSF039J19- GCTGAGATACATCAAAATTGCAGCATGACAAGGGATATTCTTCCCAGCTACATCCTCTCT
____________________________________________________________
consensus GCTGAGATACATCAAAATTGCAGCATGACAAGGGATATTCTTCCCAGCTACATCCTCTCT
. : . : . : . : . : . :
rJMFF035D08- TCAACAGTTCAACTAAAGGCATTCAATGATTCAAATTCAGCGCTGCATACCCTGACATTA
rJMSF039J19- TCAACAGTTCAACTAAAGGCATTCAATGATTCAAATTCAGCGCTGCATACCCTGACATTA
____________________________________________________________
consensus TCAACAGTTCAACTAAAGGCATTCAATGATTCAAATTCAGCGCTGCATACCCTGACATTA
. : . : . : . : . : . :
rJMFF035D08- GCACTTTTTTTTTTACAACAAAGGAAGGGAGGACCCCGGGAACAAAAACAACAACATTTC
rJMSF039J19- GCACTTTTTTTTTTACAACAAAGGAAGGGAGGACCCCGGGAACAAAAACAACAACATTTC
____________________________________________________________
consensus GCACTTTTTTTTTTACAACAAAGGAAGGGAGGACCCCGGGAACAAAAACAACAACATTTC
. : . : . : . : . : . :
rJMFF035D08- ATGTTTATCATCAACACATAANAAACACACAGCTTTGCAGTCTTGCCACTGTGAGGAACA
rJMSF039J19- AGGTTTATCATCAACACATAAGAAACACACAGCTTTGCAGTCTTGCCACTGNGAGGAACA
rJMSF013F07- GAGGAACA
____________________________________________________________
consensus ATGTTTATCATCAACACATAAGAAACACACAGCTTTGCAGTCTTGCCACTGTGAGGAACA
. : . : . : . : . : . :
rJMFF035D08- CATTTACACATGTATACAAATAACGCACAATATTGTTTTGTTTTGTTTTTCTCCTATCGN
rJMSF039J19- CATTTACACATGTATACAAATAACGCACAATATNGTTTTGTTTTGTTTTTCTCCTATCGT
rJMSF013F07- CATTTACACATGTATACAAATAACGCACAATATTGTTTTGTTTTGTTTTTCTCCTATCGT
____________________________________________________________
consensus CATTTACACATGTATACAAATAACGCACAATATTGTTTTGTTTTGTTTTTCTCCTATCGT
. : . : . : . : . : . :
rJMFF035D08- CAAGNGCTTACCAATTTGGAATAAAANATATCACATGTACACGTTCAACCATTACACATC
rJMSF039J19- CAAGNGCTTACCAATTTGGAATAAAAGATATCACANGTACACGTTCAACCATTACACATC
rJMSF013F07- CAAGTGCTTACCAATTTGGAATAAAAGATATCACATGTACACGTTCAACCATTACACATC
____________________________________________________________
consensus CAAGTGCTTACCAATTTGGAATAAAAGATATCACATGTACACGTTCAACCATTACACATC
. : . : . : . : . : . :
rJMFF035D08- ATCTGCATGNGGGTGATCAAAANAGTTAATTAATAGCTTCTTTCTTACCGCTTCAGCATC
rJMSF039J19- ATCTGCATGNGGGTGATCANAAGAGTTAATTAATAGCTTCTTTCTTACCGCTTCAGCATC
rJMSF013F07- ATCTGCATGTGGGTGATCAGAAGAGTTAATTAATAGCTTCTTTCTTACCGCTTCAGCATC
____________________________________________________________
consensus ATCTGCATGTGGGTGATCAGAAGAGTTAATTAATAGCTTCTTTCTTACCGCTTCAGCATC
. : . : . : . : . : . :
rJMFF035D08- AGCATCAGCATCAGCATCATCANAAGTAACCGTCTTTCTGGAAGGATANAGCACATAATG
rJMSF039J19- AGCATCAGCATCAGCATCATCAGAAGTAACCGTCTTTCTGGAAGGATAGAGCACATAANG
rJMSF013F07- AGCATCAGCATCAGCATCATCAGAAGTAACCGTCTTTCTGGAAGGATAGAGCACATAATG
____________________________________________________________
consensus AGCATCAGCATCAGCATCATCAGAAGTAACCGTCTTTCTGGAAGGATAGAGCACATAATG
. : . : . : . : . : . :
rJMFF035D08- TTGCACAATGAACAGAATGTCAAAAAATACCGATACCAGAGACAATAAAGTCTTTCCTAT
rJMSF039J19- TTGCACAANGAACAGAANGTCAAAAAATACCGATACCAGAGACAATAAAGTCTTTCCTAT
rJMSF013F07- TTGCACAATGAACAGAATGTCAAAAAATACCGATACCAGAGACAATAAAGTCTTTCCTAT
____________________________________________________________
consensus TTGCACAATGAACAGAATGTCAAAAAATACCGATACCAGAGACAATAAAGTCTTTCCTAT
. : . : . : . : . : . :
rJMFF035D08- ATTTCCATAGAAATTCACCCAAGAATTTTGATCTATANACTGCACAGCCATCTGCCCATA
rJMSF039J19- ATTTCCATAGAAATTCACCCAAGAATTTTGATCTATAGACNGCACAGCCATCTGCCCATA
rJMSF013F07- ATTTCCATAGAAATTCACCCAAGAATTTTGATCTATAGACTGCACAGCCATCTGCCCATA
JMSF039J19+ ATAGACTGCACAGCCATCTGCCCATA
____________________________________________________________
consensus ATTTCCATAGAAATTCACCCAAGAATTTTGATCTATAGACTGCACAGCCATCTGCCCATA
. : . : . : . : . : . :
rJMFF035D08- AT
rJMSF039J19- ATTTGTAANACCTCCTAGTAAATCAAGTAAAATGTTGCCAATACTCCATCCAACAGTGCT
rJMSF013F07- ATTTGTAAGACCTCCTAGTAAATCAAGTAAAATGTTGCCAATACTCCATCCAACAGTGCT
JMSF039J19+ ATTTGTAAGACCTCCTAGTAAATCAAGTAAAATGTTGCCAATACTCCATCCAACAGTGCT
____________________________________________________________
consensus ATTTGTAAGACCTCCTAGTAAATCAAGTAAAATGTTGCCAATACTCCATCCAACAGTGCT
. : . : . : . : . : . :
rJMSF039J19- CTTTCGTTGAAAATTCATGACTGCCTGGGGAATGTACTTGATGACTGTCATGGCAACCTG
rJMSF013F07- CTTTCGTTGAAAATTCATGACTGCCTGGGGAATGTACTTGATGACTGTCATGGCAACCTG
JMFF035D08+ TGATGACTGTCATGGCAACCTG
JMSF039J19+ CTTTCGTTGAAAATTCATGACTGCCTGGGGAATGTACTTGATGACTGTCATGGCAACCTG
____________________________________________________________
consensus CTTTCGTTGAAAATTCATGACTGCCTGGGGAATGTACTTGATGACTGTCATGGCAACCTG
. : . : . : . : . : . :
rJMSF039J19- CAAGA
rJMSF013F07- CAAGATGTTGAAGCAAGACACCAGCCATAACCAACTATGTTTGGGTATAGCAATGAACAC
JMFF035D08+ CAAGATGTTGAAGCAAGACACCAGCCATAACCAACTATGTTTGGGTATAGCAATGAACAC
JMSF039J19+ CAAGATGTTGAAGCAAGACACCAGCCATAACCAACTATGTTTGGGTATAGCAATGAACAC
____________________________________________________________
consensus CAAGATGTTGAAGCAAGACACCAGCCATAACCAACTATGTTTGGGTATAGCAATGAACAC
. : . : . : . : . : . :
rJMSF013F07- ACAAACAGCAATGGCCAACCATGCAACCGACACAATTGCAGTGCAACTTTTTGAGACCTT
JMFF035D08+ ACAAACAGCAATGGCCAACCATGCAACCGACACAATTGCAGTGCAACTTTTTGAGACCTT
JMSF039J19+ ACAAACAGCAATGGCCAACCATGCAACCGACACAATTGCAGTGCAACTTTTTGAGACCTT
____________________________________________________________
consensus ACAAACAGCAATGGCCAACCATGCAACCGACACAATTGCAGTGCAACTTTTTGAGACCTT
. : . : . : . : . : . :
rJMSF013F07- CTGGTTTCCCCTATCATAGATCACGATTTGATACAAGGTTATTGCCGTCAAAAGAACAGC
JMFF035D08+ CTGGTTTCCCCTATCATAGATCACGATTTGATACAAGGTTATTGCCGTCAAAAGAACAGC
JMSF039J19+ CTGGTTTCCCCTATCATAGATCACGATTTGATACAAGGTTATTGCCGTCAAAAGAACAGC
____________________________________________________________
consensus CTGGTTTCCCCTATCATAGATCACGATTTGATACAAGGTTATTGCCGTCAAAAGAACAGC
. : . : . : . : . : . :
rJMSF013F07- ATGTACAGAGAAAGCAACATCGTTAGCAGCTACAGGTATCATCTCATCANGGCCATATTT
JMFF035D08+ ATGTACAGAGAAAGCAACATCGTTAGCAGCTACAGGTATCATCTCATCAAGGCCATATTT
JMSF039J19+ ATGTACAGAGAAAGCAACATCGTTAGCAGCTACAGGTATCATCTCATCAAGGCCATATTT
JMSF013F07+ GGCCATATTT
____________________________________________________________
consensus ATGTACAGAGAAAGCAACATCGTTAGCAGCTACAGGTATCATCTCATCAAGGCCATATTT
. : . : . : . : . : . :
JMFF035D08+ CTGACGGTACTGCCTCTGAACAGCAGAGCCGAAGAAGAGTGAAGCGTTGTAGATGAGATA
JMSF039J19+ CTGACGGTACTGCCTCTGAACAGCAGAGCCGAAGAAGAGTGAAGCGTTGTAGATGAGATA
JMSF013F07+ CTGACGGTACTGCCTCTGAACAGCAGAGCCGAAGAAGAGTGAAGCGTTGTAGATGAGATA
____________________________________________________________
consensus CTGACGGTACTGCCTCTGAACAGCAGAGCCGAAGAAGAGTGAAGCGTTGTAGATGAGATA
. : . : . : . : . : . :
JMFF035D08+ GGAGGTGTGCTTGGTCAAATTCATCACCACGAAATCGAAATTCAATCCTATCACACTTTT
JMSF039J19+ GGAGGTGTGCTTGGTCAAATTCATCACCACGAAATCGAAATTCAATCCTATCACACTTTT
JMSF013F07+ GGAGGTGTGCTTGGTCAAATTCATCACCACGAAATCGAAATTCAATCCTATCACACTTTT
____________________________________________________________
consensus GGAGGTGTGCTTGGTCAAATTCATCACCACGAAATCGAAATTCAATCCTATCACACTTTT
. : . : . : . : . : . :
JMFF035D08+ CCGG-GAAAGTTGAGGATGACCTGAGGATAGAAACTGATAGACCACGACACAAACGCAAC
JMSF039J19+ CCGGCGAAAGTTGAGGATGACCTGAGGATAGAAACTGATAGACCACGACACAAACGCAAC
JMSF013F07+ CCGGCGAAAGTTGAGGATGACCTGAGGATAGAAACTGATAGACCACGACACAAACGCAAC
____________________________________________________________
consensus CCGGCGAAAGTTGAGGATGACCTGAGGATAGAAACTGATAGACCACGACACAAACGCAAC
. : . : . : . : . : . :
JMFF035D08+ CCATCCCAATACGTTGTACAGAACCTCCAGCGGAGTTGAGTTCCAAGACGCCATTACAGA
JMSF039J19+ CCATCCCAATACGTTGTACAGAACCTCCAGCGGAGTTGAGTTCCAAGACGCCATTACAGA
JMSF013F07+ CCATCCCAATACGTTGTACAGAACCTCCAGCGGAGTTGAGTTCCAAGACGCCATTACAGA
____________________________________________________________
consensus CCATCCCAATACGTTGTACAGAACCTCCAGCGGAGTTGAGTTCCAAGACGCCATTACAGA
. : . : . : . : . : . :
JMFF035D08+ AAACCTTTGAACCGAAATTGACAAAAAGAAATATTTTCAATTCAATTTCGGAATCTC
JMSF039J19+ AAACCTTTGAACCGAAATTGACAAAAAGAAATATTTTCAATTCAATTTCGGAATCTC
JMSF013F07+ AAACCTTTGAACCGAAATTGACAAAAAGAAATATTTTCAATTCAATTTCGGAATCTCACC
____________________________________________________________
consensus AAACCTTTGAACCGAAATTGACAAAAAGAAATATTTTCAATTCAATTTCGGAATCTCACC