Contig 011950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013E09Sequence262011950 (2)764011280 (2)ref|XP_006345564.1|3e-104PREDICTED: chitinase domain-containing protein 1-like [Solanum tuberosum]
JMSF021E24Sequence690011950 (2)ref|XP_009587234.1|7e-59PREDICTED: chitinase domain-containing protein 1-like isoform X3 [Nicotiana tom779011280 (2)ref|XP_006345564.1|3e-114PREDICTED: chitinase domain-containing protein 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF021E24+           ACTCAAGAACAATGCCATCATACTCCATTTCCTTGCACTCTGCTATAATAATTCTTATTG
                      ____________________________________________________________
consensus             ACTCAAGAACAATGCCATCATACTCCATTTCCTTGCACTCTGCTATAATAATTCTTATTG
 
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JMSF021E24+           CTTTCTCCCTCTGTCCCTTCCTTTTAAGAAGATCCATAGGGATAGCTTCCAGAACAACTC
                      ____________________________________________________________
consensus             CTTTCTCCCTCTGTCCCTTCCTTTTAAGAAGATCCATAGGGATAGCTTCCAGAACAACTC
 
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JMSF021E24+           TGGGTAAAATCAGAGCATCTCCTTTCATTCGAATTTCTGAAATCCATCCTTTATCAGCAT
                      ____________________________________________________________
consensus             TGGGTAAAATCAGAGCATCTCCTTTCATTCGAATTTCTGAAATCCATCCTTTATCAGCAT
 
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JMSF021E24+           TATGCCTTCCATCCAGAACTAAGTCGGTACCTTTACTCTTTAGTTCATACCAAAAGGTGA
                      ____________________________________________________________
consensus             TATGCCTTCCATCCAGAACTAAGTCGGTACCTTTACTCTTTAGTTCATACCAAAAGGTGA
 
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JMSF021E24+           CAAATGTGTAAACTTGTTGCAAAACTTCTTGGCCAGGTTATAACCTTTTGAATTCCAGGG
                      ____________________________________________________________
consensus             CAAATGTGTAAACTTGTTGCAAAACTTCTTGGCCAGGTTATAACCTTTTGAATTCCAGGG
 
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JMSF021E24+           CGTAATGTAGGCTAGTACAGGATTCTGAAAATGCCGACGAGTTTCGGTTGAATCTTCAGA
                      ____________________________________________________________
consensus             CGTAATGTAGGCTAGTACAGGATTCTGAAAATGCCGACGAGTTTCGGTTGAATCTTCAGA
 
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JMSF021E24+           CACCTTTGAATTCTCAGTGAGAACTTCGTGATAATTCAAGTCGGGCTTGACCAACTCGTG
                      ____________________________________________________________
consensus             CACCTTTGAATTCTCAGTGAGAACTTCGTGATAATTCAAGTCGGGCTTGACCAACTCGTG
 
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JMSF021E24+           TTGGTAAAGGTATGGCTTACGAGAATCGACCACAGACACAGTAGCTGGAGAGTATATTTT
JMSF013E09+                                                 CAGTAGCTGGAGAGTATATTTT
                      ____________________________________________________________
consensus             TTGGTAAAGGTATGGCTTACGAGAATCGACCACAGACACAGTAGCTGGAGAGTATATTTT
 
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JMSF021E24+           CCTGTATACGAAAACAGATATTGCCGGAAATATGATGAAGAAAAGAATGTAGAAAGATAT
JMSF013E09+           CCTGTATACGAAAACAGATATTGCCGGAAATATGATGAAGAAAAGAATGTAGAAAGATAT
                      ____________________________________________________________
consensus             CCTGTATACGAAAACAGATATTGCCGGAAATATGATGAAGAAAAGAATGTAGAAAGATAT
 
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JMSF021E24+           GAGCTTGCGATCTCGAGGCTTCGTGCGAGACTTTACTGGCTCGTTGTTCTGGTTTGCCGA
JMSF013E09+           GAGCTTGCGATCTCGAGGCTTCGTGCGAGACTTTACTGGCTCGTTGTTCTGGTTTGCCGA
                      ____________________________________________________________
consensus             GAGCTTGCGATCTCGAGGCTTCGTGCGAGACTTTACTGGCTCGTTGTTCTGGTTTGCCGA
 
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JMSF021E24+           AGAGCCGGGTCGATCATTCCGCCGGCTAGTGCTCGGCCCTAGTCGCCGATCTCGGGTTTT
JMSF013E09+           AGAGCCGGGTCGATCATTCCGCCGGCTAGTGCTCGGCCCTAGTCGCCGATCTCGGGTTTT
                      ____________________________________________________________
consensus             AGAGCCGGGTCGATCATTCCGCCGGCTAGTGCTCGGCCCTAGTCGCCGATCTCGGGTTTT
 
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JMSF021E24+           GGCCATTTACTATCACCACCGATACTCAG                               
JMSF013E09+           GGCCATTTACTATCACCACCGATACTCAGGCACCGTTCCAGTCTTCCAGAATCAATACTC
                      ____________________________________________________________
consensus             GGCCATTTACTATCACCACCGATACTCAGGCACCGTTCCAGTCTTCCAGAATCAATACTC