clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS101G08 | Sequence | 608 | 011947 (6) | ref|XP_006351312.1| | 6e-114 | PREDICTED: villin-2-like [Solanum tuberosum] | |||||
JMSF003K08 | Sequence | 310 | 006361 (9) | ref|XP_009758247.1| | 3e-05 | PREDICTED: uncharacterized protein LOC104210965 isoform X1 [Nicotiana sylvestri | 167 | 011947 (6) | emb|CDP17048.1| | 1e-07 | unnamed protein product [Coffea canephora] |
JMSF004H24 | Sequence | 280 | 011947 (6) | ref|XP_009611102.1| | 1e-07 | PREDICTED: uncharacterized protein LOC104104669 isoform X2 [Nicotiana tomentosi | |||||
JMSF012P06 | Sequence | 458 | 011947 (6) | 741 | 011947 (6) | ref|XP_010036452.1| | 3e-16 | PREDICTED: villin-3-like isoform X1 [Eucalyptus grandis] | |||
JMSF044N13 | Sequence | 729 | 011947 (6) | ref|XP_009611103.1| | 2e-13 | PREDICTED: uncharacterized protein LOC104104669 isoform X3 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMSF012P06- ATCATCATCCAGTC
____________________________________________________________
consensus ATCATCATCCAGTC
. : . : . : . : . : . :
rJMSF012P06- ATAATACTAAAAAAAACAATTCTACGAACCAAGTCTAAATGATTACAACGTCAAATTATA
____________________________________________________________
consensus ATAATACTAAAAAAAACAATTCTACGAACCAAGTCTAAATGATTACAACGTCAAATTATA
. : . : . : . : . : . :
rJMSF012P06- CCTACTCTATATAATTTGATAGAATATCGGCACATTCTGAACGCACCAGATCAATAACCG
____________________________________________________________
consensus CCTACTCTATATAATTTGATAGAATATCGGCACATTCTGAACGCACCAGATCAATAACCG
. : . : . : . : . : . :
rJMSF012P06- CTTTGTCATAATCAACTTGTTGAAACTTGCGGCGACCGAGGAGAATGGTGGCGACCGGCG
____________________________________________________________
consensus CTTTGTCATAATCAACTTGTTGAAACTTGCGGCGACCGAGGAGAATGGTGGCGACCGGCG
. : . : . : . : . : . :
JMFS101G08+ TGGATTTGAATGAATGTGTTTCATAACCT
rJMSF012P06- AGCTTGCGGTAATGGGCGAAGGGCGAATGAATGGACTTGAATGAATGTGTCTCATAACCT
____________________________________________________________
consensus AGCTTGCGGTAATGGGCGAAGGGCGAATGAATGGATTTGAATGAATGTGTTTCATAACCT
. : . : . : . : . : . :
JMFS101G08+ TGAATAAGCCGAGTAATACGCGTTGATTTGGGTCTATTTTGAGAGGCTATGAACTCCTCT
rJMSF012P06- TGAATAAGCCGAGTAATACACATCGATTTGGGTCTATTTTGAGAGTCTATGAACTCCTCT
____________________________________________________________
consensus TGAATAAGCCGAGTAATACGCGTTGATTTGGGTCTATTTTGAGAGTCTATGAACTCCTCT
. : . : . : . : . : . :
JMFS101G08+ GCAGCTTGAATAGCAGATTTCCTC-TCATTCACTTGTGTTACACGGCCAACCCAAACAAA
rJMSF012P06- GCAGCTTGAATAGCAGATTTCCTCATCATTCACTTGTGTTACACGGCCAACCCAAAAAAA
____________________________________________________________
consensus GCAGCTTGAATAGCAGATTTCCTCATCATTCACTTGTGTTACACGGCCAACCCAAACAAA
. : . : . : . : . : . :
JMFS101G08+ TACCTCATCACCACAATCTAATAAATAGCATCTG
rJMSF003K08- CATCTGAGAAGTATACCATTTTCCATCCTTCC
rJMSF012P06- TACCTTTTCACCACAATCTAATAAATAGCATCTGAGAAGTATACCATTTTCCATCCTTCC
____________________________________________________________
consensus TACCTTTTCACCACAATCTAATAAATAGCATCTGAGAAGTATACCATTTTCCATCCTTCC
. : . : . : . : . : . :
rJMSF003K08- AATCCATGTGAGGTCTTAATTCTGAGTGATTGANCACCCTCTCCTT
rJMSF012P06- AATCCATGTGAGGTCTTAATTCTGAGTGATTGAGCAGCCTCTCCTTTCGATGTAGACCTT
JMSF044N13+ TCGATGTAGACCTT
____________________________________________________________
consensus AATCCATGTGAGGTCTTAATTCTGAGTGATTGAGCAGCCTCTCCTTTCGATGTAGACCTT
. : . : . : . : . : . :
JMSF004H24+ GGCGTTCTTCTTTTTGGAACCGGATCTTGTAGAGGAAGAAGGAGAAGAA
rJMSF012P06- GGCGTTCCAAAGGCGTTCTTCTTTTTGGAACCGAATCATGTAGTGGAAGAAGGAGAAGAA
JMSF044N13+ GGCGTTCCAAAGGCGTTCTTCTTTTTGGAACCGAATCATGTAGTGGAAGAAGGAGAAGAA
____________________________________________________________
consensus GGCGTTCCAAAGGCGTTCTTCTTTTTGGAACCGAATCATGTAGTGGAAGAAGGAGAAGAA
. : . : . : . : . : . :
JMSF004H24+ GAGGGAGGAGGAGGATTAGGGTCAAGAATGACGGCCTCGAACCACGCTCCCGTGAAGCCT
rJMSF012P06- GATGGAGGAGGAGGATTAGGGTCAAGAATGACGGCCCCAAACCACGTTCCCGTGAAGCCT
JMSF044N13+ GATGGAGGAGGAGGATTAGGGTCAAGAATGACGGCCCCAAACCACGTTCCCGTGAAGCCT
JMSF012P06+ CAAGAATGACGGCCCCAAACCACGTTCCCGTGAAGCCT
____________________________________________________________
consensus GATGGAGGAGGAGGATTAGGGTCAAGAATGACGGCCCCAAACCACGTTCCCGTGAAGCCT
. : . : . : . : . : . :
JMSF004H24+ TCTTCGTCT
rJMSF012P06- TCTTCGTCTGTGCACACCTCAGGTCCTCAACCAACGACCCCTTGGCTAGTAGCTGCTTCT
JMSF044N13+ TCTTCGTCTGTGCACACCTCAGGTCCTCAACCAACGACCCCTTGGCTAGTAGCTGCTTCT
JMSF012P06+ TCTTCGTCTGTGCACACCTCAGGTCCTCAACCAACGACCCCTTGGCTAGTAGCTGCTTCT
____________________________________________________________
consensus TCTTCGTCTGTGCACACCTCAGGTCCTCAACCAACGACCCCTTGGCTAGTAGCTGCTTCT
. : . : . : . : . : . :
rJMSF012P06- GCTAAAATAAAATAGAAAAATTAANTAATTACNAAAACATTTTGTACGTACCTGCTGCGG
JMSF044N13+ GCTAAAATAAAATAGAAAAATTAAATAATTACAAAAACATTTTGTACGTACCTGCTGCGG
JMSF012P06+ GCTAAAATAAAATAGAAAAATTAAATAATTACAAAAACATTTTGTACGTACCTGCTGCGG
____________________________________________________________
consensus GCTAAAATAAAATAGAAAAATTAAATAATTACAAAAACATTTTGTACGTACCTGCTGCGG
. : . : . : . : . : . :
rJMSF012P06- AGGCGAC
JMSF044N13+ AGGCGACGACCGAGGAGGAGCTTCGGAGATCTCAATTGAAAGCCATGAAAGTTGAGTTTG
JMSF012P06+ AGGCGACGACCGAGGAGGAGCTTCGGAGATCTCAATTGAAAGCCATGAAAGTTGAGTTTG
____________________________________________________________
consensus AGGCGACGACCGAGGAGGAGCTTCGGAGATCTCAATTGAAAGCCATGAAAGTTGAGTTTG
. : . : . : . : . : . :
JMSF044N13+ CAGAAATCGATAATTTTCTGAGATTCCAGATATGAAGAGAGAAAAGAGAGGAGGAATGGT
JMSF012P06+ CAGAAATCGATAATTTTCTGAGATTCCAGATATGAAGAGAGAAAAGAGAGGAGGAATGGT
____________________________________________________________
consensus CAGAAATCGATAATTTTCTGAGATTCCAGATATGAAGAGAGAAAAGAGAGGAGGAATGGT
. : . : . : . : . : . :
JMSF044N13+ TAAACCCTAGTATATCTTCTTTCACTTGGAGCTCTGTAATGATTTCTAAACTAAAATGTT
JMSF012P06+ TAAACCCTAGTATATCTTCTTTCACTTGGAGCTCTGTAATGATTTCTAAACTAAAATGTT
____________________________________________________________
consensus TAAACCCTAGTATATCTTCTTTCACTTGGAGCTCTGTAATGATTTCTAAACTAAAATGTT
. : . : . : . : . : . :
JMSF044N13+ TTTACTGCGGAGATGGCTAGTGTGGAGAATGGCGGTCGGCGGAGGCGGAGATGTCTGAGG
JMSF012P06+ TTTACTGCGGAGATGGCTAGTGTGGAGAATGGTGGTCGGCGGAGGCGGAGATGTCTGAGG
____________________________________________________________
consensus TTTACTGCGGAGATGGCTAGTGTGGAGAATGGTGGTCGGCGGAGGCGGAGATGTCTGAGG
. : . : . : . : . : . :
JMSF044N13+ ACAATGGCGGTTGGTGAAGAGCACTCTGACTGCGAAGATGTCT
JMSF012P06+ ACAATGGCGGTTGGTGAAGAGCACTCTGACTGCGAAGATGTCTGAGGACAATGGTAGTCC
____________________________________________________________
consensus ACAATGGCGGTTGGTGAAGAGCACTCTGACTGCGAAGATGTCTGAGGACAATGGTAGTCC