Contig 011945:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025I07+                                                            CCAGATTACTA
                      ____________________________________________________________
consensus                                                              CCAGATTACTA
 
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JMSF025I07+           TGGCACTATCATCGGGTGACCATTGTATATCAGCCAAATCCAATGTATCTACAGCGAAAA
                      ____________________________________________________________
consensus             TGGCACTATCATCGGGTGACCATTGTATATCAGCCAAATCCAATGTATCTACAGCGAAAA
 
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JMSF025I07+           CACCCATTATCTCCCATGTATGGCAAGACAGCAGATTGACATAGTCCTTGCAATCACGTC
JMFS049H08+                       CCCATGTATGGCAAGACAGCAGATTGACATAGTCCTTGCAATCACGTC
                      ____________________________________________________________
consensus             CACCCATTATCTCCCATGTATGGCAAGACAGCAGATTGACATAGTCCTTGCAATCACGTC
 
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JMSF025I07+           TTGTGCAAATTGCAGCAAATTTTCCATCCTTGGTGAAGGATACTCCCTTAGAACCATGCT
JMFS049H08+           TTGTGCAAATTGCAGCAAATTTTCCATCCTTGGTGAAGGATACTCCCTTAGAACCATGCT
                      ____________________________________________________________
consensus             TTGTGCAAATTGCAGCAAATTTTCCATCCTTGGTGAAGGATACTCCCTTAGAACCATGCT
 
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JMSF025I07+           TTGGCCATTGCACATGTATGCATGCAGTGTTGAGTAGTGACCAAACAGTTAACCGTAGTT
JMFS049H08+           TTGGCCATTGCACATGTATGCATGCAGTGTTGAGTAGTGACCAAACAGTTAACCGTAGTT
JMSF012N20+                                                            TAACCGTAGTT
                      ____________________________________________________________
consensus             TTGGCCATTGCACATGTATGCATGCAGTGTTGAGTAGTGACCAAACAGTTAACCGTAGTT
 
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JMSF025I07+           GGAATTCAGATGTAGTCAATATGTGTCGACTGTCAGGGCTCCACCTAGCATAGGAAATAC
JMFS049H08+           GGAATTCAGATGTAGTCAATATGTGTCGACTGTCAGGGCTCCACCTAGCATAGGAAATAC
JMSF012N20+           GGAATTCAGATGTAGTCAATATGTGTCGACTGTCAGGGCTCCACCTAGCATAGGAAATAC
                      ____________________________________________________________
consensus             GGAATTCAGATGTAGTCAATATGTGTCGACTGTCAGGGCTCCACCTAGCATAGGAAATAC
 
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JMSF025I07+           CAGCAGGACCTTCATCTATCTTACATGTCCATTCAGGTTGCGTCAGTGACCATGCTTGGA
JMFS049H08+           CAGCAGGACCTTCATCTATCTTACATGTCCATTCAGGTTGCGTCAGTGACCATGCTTGGA
JMSF012N20+           CAGCAGGACCTTCATCTATCTTACATGTCCATTCAGGTTGCGTCAGTGACCATGCTTGGA
                      ____________________________________________________________
consensus             CAGCAGGACCTTCATCTATCTTACATGTCCATTCAGGTTGCGTCAGTGACCATGCTTGGA
 
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JMSF025I07+           TCATCGGTCTCTTGTAAAGACCACAAAGGATGTACTGTGAATCAAGTGCCCATTCAATGT
JMFS049H08+           TCATCGGTCTCTTGTAAAGACCACAAAGGATGTACTGTGAATCAAGTGCCCATTCAATGT
JMSF012N20+           TCATCGGTCTCTTGTAAAGACCACAAAGGATGTACTGTGAATCAAGTGCCCATTCAATGT
                      ____________________________________________________________
consensus             TCATCGGTCTCTTGTAAAGACCACAAAGGATGTACTGTGAATCAAGTGCCCATTCAATGT
 
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JMSF025I07+           ATGTAATCTTATCCAAGCATGAAAATAGTTGCACCACCTTGAGTGAGAGAGCTTCCCGAA
JMFS049H08+           ATGTAATCTTATCCAAGCATGAAAATAGTTGCACCACCTTGAGTGAGAGAGCTTCCCGAA
JMSF012N20+           ATGTAATCTTATCCAAGCATGAAAATAGTTGCACCACCTTGAGTGAGAGAGCTTCCCGAA
                      ____________________________________________________________
consensus             ATGTAATCTTATCCAAGCATGAAAATAGTTGCACCACCTTGAGTGAGAGAGCTTCCCGAA
 
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JMSF025I07+           TTACAAGGCGGTAATCAACGGCGACGGCGAGAAATCGAGCATTTGGGGAGAAAGCACACG
JMFS049H08+           TTACAAGGCGGTAATCAACGGCGACGGCGAGAAATCGAGCATTTGGGGAGAAAGCACACG
JMSF012N20+           TTACAAGGCGGTAATCAACGGCGACGGCGAGAAATCGAGCATTTGGGGAGAAAGCACACG
                      ____________________________________________________________
consensus             TTACAAGGCGGTAATCAACGGCGACGGCGAGAAATCGAGCATTTGGGGAGAAAGCACACG
 
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JMSF025I07+           GGCCAGATTGTTTAAACGCTTCTGTAAAGTCCATTGAAGCTCAAACCTAAAGGATTGTTT
JMFS049H08+           GGCCAGATTGTTTAAACGCTTCTGTAAAGTCCATTGAAGCTCAAACCTAAAGGATTGTTT
JMSF012N20+           GGCCAGATTGTTTAAACGCTTCTGTAAAGTCCATTGAAGCTCAAACCTAAAGGATTGTTT
                      ____________________________________________________________
consensus             GGCCAGATTGTTTAAACGCTTCTGTAAAGTCCATTGAAGCTCAAACCTAAAGGATTGTTT
 
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JMSF025I07+           GCTTCAGATGTCTGGGGAATTCACATTGCTAACTCTCTCTTGCTTTCTAAAGGTTTCCAA
JMFS049H08+           GCTTCAGATGTCTGGGGAATTCACATTGCTAACTCTCTCTTGCTTTCTAAAGGTTTCCAA
JMSF012N20+           GCTTCAGATGTCTGGGGAATTCACATTGCTAACTCTCTCTTGCTTTCTAAAGGTTTCCAA
                      ____________________________________________________________
consensus             GCTTCAGATGTCTGGGGAATTCACATTGCTAACTCTCTCTTGCTTTCTAAAGGTTTCCAA
 
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JMSF025I07+           AGATTTATGATTCGGAA                                           
JMFS049H08+           AGATTTATGATTCGGAA                                           
JMSF012N20+           AGATTTATGATTCGGAAGCAGTGGATCTGAAGAGGCTTGTGGGATGTGTGATGGGGTTCC
                      ____________________________________________________________
consensus             AGATTTATGATTCGGAAGCAGTGGATCTGAAGAGGCTTGTGGGATGTGTGATGGGGTTCC