| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013F05 | Sequence | 148 | 011942 (16) | ref|XP_006449737.1| | 1e-08 | hypothetical protein CICLE_v10018055mg [Citrus clementina] ref|XP_006467427.1| P | 113 | 011942 (16) | ref|XP_006584449.1| | 1e-04 | PREDICTED: ankyrin repeat domain-containing protein 13C-B [Glycine max] |
| JMFF049L14 | Sequence | 138 | 011942 (16) | ref|XP_006449737.1| | 3e-08 | hypothetical protein CICLE_v10018055mg [Citrus clementina] ref|XP_006467427.1| P | 138 | 011942 (16) | ref|XP_006449737.1| | 3e-08 | hypothetical protein CICLE_v10018055mg [Citrus clementina] ref|XP_006467427.1| P |
| JMFN010B18 | Sequence | 527 | 011942 (16) | emb|CDP04407.1| | 6e-19 | unnamed protein product [Coffea canephora] | |||||
| JMFN010C20 | Sequence | 587 | 011942 (16) | dbj|BAJ13299.1| | 4e-80 | autophagy 8 [Ipomoea nil] | |||||
| JMFN016J23 | Sequence | 583 | 011942 (16) | dbj|BAJ13299.1| | 2e-79 | autophagy 8 [Ipomoea nil] | |||||
| JMFN016L21 | Sequence | 595 | 011942 (16) | dbj|BAJ13299.1| | 2e-79 | autophagy 8 [Ipomoea nil] | |||||
| JMFN020H13 | Sequence | 434 | 011942 (16) | emb|CDP04407.1| | 8e-12 | unnamed protein product [Coffea canephora] | |||||
| JMFN028J08 | Sequence | 575 | 011942 (16) | dbj|BAJ13299.1| | 2e-79 | autophagy 8 [Ipomoea nil] | |||||
| JMFN036N08 | Sequence | 550 | 011942 (16) | emb|CDP04407.1| | 3e-18 | unnamed protein product [Coffea canephora] | |||||
| JMFN039L07 | Sequence | 579 | 011942 (16) | dbj|BAJ13299.1| | 4e-80 | autophagy 8 [Ipomoea nil] | |||||
| JMFS109A11 | Sequence | 599 | 011942 (16) | dbj|BAJ13299.1| | 2e-79 | autophagy 8 [Ipomoea nil] | |||||
| JMFS148A10 | Sequence | 508 | 011942 (16) | emb|CDP04407.1| | 5e-19 | unnamed protein product [Coffea canephora] | |||||
| JMSF012K14 | Sequence | 201 | 011942 (16) | 655 | 011942 (16) | dbj|BAJ13299.1| | 8e-46 | autophagy 8 [Ipomoea nil] | |||
This contig is upended
. : . : . : . : . : . :
JMFN036N08- TTCTCCCAATTATATCACAC
____________________________________________________________
consensus TTCTCCCAATTATATCACAC
. : . : . : . : . : . :
JMFN036N08- AACCTGCTAAATATCTCTGCCTGCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
JMFF013F05- GCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
JMFF049L14- GCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
rJMFF013F05+ GCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
rJMFF049L14+ GCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
JMFN010B18- GCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
JMFS148A10- GTTTCATCAAAGATTCCAGGT
____________________________________________________________
consensus AACCTGCTAAATATCTCTGCCTGCTAAGATCCACCCATAGTTTCATCAAAGATTCCAGGT
. : . : . : . : . : . :
JMFN036N08- GATAATGGCTGCAGAGGGACCAAGGTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
JMFF013F05- GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
JMFF049L14- GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
rJMFF013F05+ GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
rJMFF049L14+ GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
JMFN010B18- GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
JMFN020H13- TGGGGGGCAGGGGGGATTGGTGC
JMFS148A10- GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
____________________________________________________________
consensus GATAATGGCTGCAGAGGGACCAAGCTGGGCAGATCAGTGGGGGGCAGGGGGGATTGGTGC
. : . : . : . : . : . :
JMFN036N08- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAAGAAGAAGGAAGGCTCACA
JMFF013F05- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAA
JMFF049L14- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGC
rJMFF013F05+ AATGGA
rJMFF049L14+ AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGC
JMFN010B18- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAAGAAGAAGGAAGGCTCACA
JMFN020H13- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAAGAAGAAGGAAGGCTCACA
JMFS148A10- AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAAGAAGAAGGAAGGCTCACA
____________________________________________________________
consensus AATGGATGAAGAAGACAACACTAAGGTTAAAGAAGAGAGCAAGAAGAAGGAAGGCTCACA
. : . : . : . : . : . :
JMFN036N08- GGGAGGTCTTGGGAAAGCTAAAGCTGTGGCAATGGCAGGTGCCCAGAAGGTGAAGAATGG
JMFN010B18- GGGAGGTCTTGGGAAAGCTAAAGCTGTGGCAATGGCAGGTGCCCAGAAGGTGAAGAATGG
JMFN020H13- GGGAGGTCTTGGGAAAGCTAAAGCTGTGGCAATGGCAGGTGCCCAGAAGGTGAAGAATGG
JMFS148A10- GGGAGGTCTTGGGAAAGCTAAAGCTGTGGCAATGGCAGGTGCCCAGAAGGTGAAGAATGG
____________________________________________________________
consensus GGGAGGTCTTGGGAAAGCTAAAGCTGTGGCAATGGCAGGTGCCCAGAAGGTGAAGAATGG
. : . : . : . : . : . :
JMFN036N08- CACATCCATGGGGATCAAGTGGGTGAAGAACAAATGCCAGAAGAAAAACAACACTTCTTC
JMFN010B18- CACATCCATGGGGATCAAGTGGGTGAAGAACAAATGCCAGAAGAAAAACAACACTTCTTC
JMFN020H13- CACATCCATGGGGATCAAGTGGGTGAAGAACAAATGCCAGAAGAAAAACAACACTTCTTC
JMFS148A10- CACATCCATGGGGATCAAGTGGGTGAAGAACAAATGCCAGAAGAAAAACAACACTTCTTC
____________________________________________________________
consensus CACATCCATGGGGATCAAGTGGGTGAAGAACAAATGCCAGAAGAAAAACAACACTTCTTC
. : . : . : . : . : . :
JMFN036N08- AGCCTGAAGAAACCTGTGCTCAAGATTTCAAGAAAATGATTGGTTTAGTGTAAATTATTG
JMFN010B18- AGCCTGAAGAAACCTGTGCTCAAGATTTCAAGAATATGATTGGTTTAGTGTAAATTATTG
JMFN020H13- AGCCTGAAGAAACCTGTGCTCAAGATTTCAAGAATATGATTGGTTTAGTGTAAATTATTG
JMFS148A10- AGCCTGAAGAAACCTGTGCTCAAGATTTCAAGAATATGATTGGTTTAGTGTAAATTATTG
____________________________________________________________
consensus AGCCTGAAGAAACCTGTGCTCAAGATTTCAAGAATATGATTGGTTTAGTGTAAATTATTG
. : . : . : . : . : . :
JMFN036N08- TTTTCTTGAAAGTTGAAAATTCTGATTTCTGTGATCATATGCATAATCAAGAATTCAAGA
JMFN010B18- TTTTCTTGAAAGTTGAAAATTCTGATTTCTGTGATCATATGCATAATCAAGAATTCAAGA
JMFN020H13- TTTTCTTGAAAGTTGAAAATTCTGATTTCTGTGATCATATGCATAATCAAGAATTCAAGA
JMFS148A10- TTTTCTTGAAAGTTGAAAATTCTGATTTCTGTGATCATATGCATAATCAAGAATTCAAGA
____________________________________________________________
consensus TTTTCTTGAAAGTTGAAAATTCTGATTTCTGTGATCATATGCATAATCAAGAATTCAAGA
. : . : . : . : . : . :
JMFN036N08- TCCACACAGCACAGATATGAATATATGATACCCAGAAGCCAAAAAAGACACATTAGGTCT
JMFN010B18- TCCACACAGCACAGATATGAATATATGATACCCAGAAGCCAAAAAAGACACATTAGGTCT
JMFN020H13- TCCACACAGCACAGATATGAATATATGATACCCAGAAGCCAAAAAAGACACATTAGGTCT
JMFS148A10- TCCACACAGCACAGATATGAATATATGATACCCAGAAGCCAAAAAAGACACATTAGGTCT
____________________________________________________________
consensus TCCACACAGCACAGATATGAATATATGATACCCAGAAGCCAAAAAAGACACATTAGGTCT
. : . : . : . : . : . :
JMFN036N08- GTGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTG
JMFN010B18- GTGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
JMFN020H13- GTGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTGT
JMFS148A10- GTGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
JMFS109A11- TGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
JMFN039L07+ AAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
JMFN010C20+ TTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
JMFN028J08+ TCAAGAGTGAATCCATTTTTTGTCGTTGTGAG
JMFN016L21+ TTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTNTGAG
JMFN016J23+ AAGAAATCAAGAGTGAATCCATTNTTTGTCGTTTTGAG
rJMSF012K14- CATTTTTTGTCGTTTTGAG
____________________________________________________________
consensus GTGCAAGCAAATGTAGCTTTCTAAGAAATCAAGAGTGAATCCATTTTTTGTCGTTTTGAG
. : . : . : . : . : . :
JMFN010B18- TT
JMFS148A10- TT
JMFS109A11- TTGATTTACAACGGTCCATATCGAATTGGTCCTTTTTTTTTTTAATCTTCTAAAGCAAAG
JMFN039L07+ TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
JMFN010C20+ TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
JMFN028J08+ TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
JMFN016L21+ TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
JMFN016J23+ TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
rJMSF012K14- TTGATTTACAACGGTCCATATCGAATTGGTCCTTTTTTTTTTTAATCTTCTAAAGCAAAG
____________________________________________________________
consensus TTGATTTACAACGGTCCATATCGAATTGGTCC-TTTTTTTTTTAATCTTCTAAAGCAAAG
. : . : . : . : . : . :
JMFS109A11- GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
JMFN039L07+ GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
JMFN010C20+ GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
JMFN028J08+ GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
JMFN016L21+ GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
JMFN016J23+ GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
rJMSF012K14- GATTTACAGTTGGGAGTTTCCANGTANAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
____________________________________________________________
consensus GATTTACAGTTGTGAGTTTCCATGTAGAGTTTATTAACCTTCTTTCTAGCTAGTCGCACC
. : . : . : . : . : . :
JMFS109A11- CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
JMFN039L07+ CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
JMFN010C20+ CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
JMFN028J08+ CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
JMFN016L21+ CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
JMFN016J23+ CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
rJMSF012K14- CNAAGGGGTTCNCCCCGCTGTAAGTCANGTAAAGGAAGCCATCTTCATCCTNGGGCTCCT
____________________________________________________________
consensus CGAAGGTGTTCTCCCCGCTGTAAGTCATGTAAAGGAAGCCATCTTCATCCTTGTGCTCCT
. : . : . : . : . : . :
JMFS109A11- CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
JMFN039L07+ CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
JMFN010C20+ CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
JMFN028J08+ CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
JMFN016L21+ CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
JMFN016J23+ CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
rJMSF012K14- CGNAAATTGCAAACATCAANGCANCGGTNGGGGGCAGCANGTTCTTAACAAANACAAATA
____________________________________________________________
consensus CGTAAATTGCAGACATCAATGCAGCGGTTGGTGGCAGCATGTTCTTAACAAAGACAAATA
. : . : . : . : . : . :
JMFS109A11- TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
JMFN039L07+ TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
JMFN010C20+ TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
JMFN028J08+ TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
JMFN016L21+ TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
JMFN016J23+ TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
rJMSF012K14- TNGCCTTCNCGGCGCTNAGCTTGATCCTTTTTCNAACAACATACACAAACNGGCCAACAG
____________________________________________________________
consensus TTGCCTTCTCGGCGCTGAGCTTGATCCTTTTTCGAACAACATACACAAACTGGCCAACAG
. : . : . : . : . : . :
JMFS109A11- TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
JMFN039L07+ TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
JMFN010C20+ TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
JMFN028J08+ TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
JMFN016L21+ TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
JMFN016J23+ TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
rJMSF012K14- TCAGGTCTGCGGGAACAAGGNATTTTTTCTNGNCNATATCAGGAANGTCGCTCCTTTCNG
____________________________________________________________
consensus TCAGGTCTGCGGGAACAAGGTATTTTTTCTTGTCGATATCAGGAATGTCGCTCCTTTCTG
. : . : . : . : . : . :
JMFS109A11- CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
JMFN039L07+ CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
JMFN010C20+ CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
JMFN028J08+ CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
JMFN016L21+ CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
JMFN016J23+ CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
rJMSF012K14- CTTTTTCAACAATCACGGGAATTCTTTCAGGANACTTCNCCCGGANGCNAGNANATTCTG
____________________________________________________________
consensus CTTTTTCAACAATCACGGGAATTCTTTCAGGATACTTCTCCCGGATGCGAGTAGATTCTG
. : . : . : . : . : . :
JMFS109A11- ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
JMFN039L07+ ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
JMFN010C20+ ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
JMFN028J08+ ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
JMFN016L21+ ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
JMFN016J23+ ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
rJMSF012K14- ACNGCCNCCTCNCCAAAGGANGATCAAACTTGAAGCTCTTANCCANGGAAAGACTTGAAC
JMSF012K14+ TAGCCATGGAAAGACTTGAAC
____________________________________________________________
consensus ACTGCCTCCTCTCCAAAGGATGATCAAACTTGAAGCTCTTAGCCATGGAAAGACTTGAAC
. : . : . : . : . : . :
JMFS109A11- TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAAC
JMFN039L07+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
JMFN010C20+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
JMFN028J08+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
JMFN016L21+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
JMFN016J23+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
rJMSF012K14- TTTGACCTCTCNCCAACAACANAAAAACCTTCAAACTTGCGNAANACNATAATTGATGAG
JMSF012K14+ TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
____________________________________________________________
consensus TTTGACCTCTCTCCAACAACAGAAAAACCTTCAAACTTGCGGAAGACGATAATTGATGAG
. : . : . : . : . : . :
JMFN039L07+ AA
JMFN010C20+ AA
JMFN028J08+ AAGA
JMFN016L21+ AAGA
JMFN016J23+ AAGA
rJMSF012K14- AANAATAAGTTTNGGGTATTCCGNATTCCAAAAAGTTATGATTGANAAGGGGTTATAAGG
JMSF012K14+ AAGAATAAGTTTTGGGTATTCCGTATTCCAAAAAGTTATGATTGAGAAGGGGTTATAAGG
____________________________________________________________
consensus AAGAATAAGTTTTGGGTATTCCGTATTCCAAAAAGTTATGATTGAGAAGGGGTTATAAGG
. : . : . : . : . : . :
rJMSF012K14- ATGANAAACGCTAAACTAGGTTCCTGAATGCTCACG
JMSF012K14+ ATGAGAAACGCTAAACTAGGTTCCTGAATGCTCACGAAATCAGGAGAGTTTGGTTCGGCC
____________________________________________________________
consensus ATGAGAAACGCTAAACTAGGTTCCTGAATGCTCACGAAATCAGGAGAGTTTGGTTCGGCC