Contig 011941:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020C03Sequence570011941 (2)ref|XP_011011224.1|2e-44PREDICTED: peter Pan-like protein [Populus euphratica] ref|XP_011011225.1| PREDI179022327
JMSF012H10Sequence572011941 (2)ref|XP_011079663.1|9e-61PREDICTED: peter Pan-like protein [Sesamum indicum]719021404ref|XP_010312799.1|2e-20PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X3 [Solanum lycopers

Alignment

This contig is upended


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JMFF020C03+                                        TGCAATTGAGATTTTGCAATGTCAGCAGCCA
JMSF012H10+                                      GGTGCAATTGAGATTTTGCAATGTCAGCAGCCA
                      ____________________________________________________________
consensus                                        GGTGCAATTGAGATTTTGCAATGTCAGCAGCCA
 
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JMFF020C03+           GTGCATACTCAAGTATTTTAAATGTAAGGGTTGGGCCCTGAGGGGCACGAGCAACCCGTA
JMSF012H10+           GTGCATACTCAAGTATTTTAAATGTAAGGGTTGGGCCCTGAGGGGCACGAGCAACCCGTA
                      ____________________________________________________________
consensus             GTGCATACTCAAGTATTTTAAATGTAAGGGTTGGGCCCTGAGGGGCACGAGCAACCCGTA
 
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JMFF020C03+           AGTATGGAGAAGCATTGGTTTTTGATAAAATGAGAAAATGTGTAACACCCATAGGCCCTG
JMSF012H10+           AGTATGGAGAAGCATTGGTTTTTGATAAAATGAGAAAATGTGTAACACCCATAGGCCCTG
                      ____________________________________________________________
consensus             AGTATGGAGAAGCATTGGTTTTTGATAAAATGAGAAAATGTGTAACACCCATAGGCCCTG
 
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JMFF020C03+           CAAAATTCAAGAACTCCTTGAGCTTATTGCGCTTCGTTTCCTTGAGATTGAGAGCAGTAT
JMSF012H10+           CAAAATTCAAGAACTCCTTGAGCTTATTGCGCTTCGTTTCCTTGAGATTGAGAGCAGTAT
                      ____________________________________________________________
consensus             CAAAATTCAAGAACTCCTTGAGCTTATTGCGCTTCGTTTCCTTGAGATTGAGAGCAGTAT
 
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JMFF020C03+           AAGGACGCATCAATTCTCTCAAATCTTTTCGCAATGTTCTAAGAGACCCAGGCAACTTCC
JMSF012H10+           AAGGACGCATCAATTCTCTCAAATCTTTTCGCAATGTTCTAAGAGACCCAGGCAACTTCC
                      ____________________________________________________________
consensus             AAGGACGCATCAATTCTCTCAAATCTTTTCGCAATGTTCTAAGAGACCCAGGCAACTTCC
 
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JMFF020C03+           CCCTCGGAAAACACCATGCTCTGGGGAATCTTGTCCCCAGTTATCTGATTAACATTTGGT
JMSF012H10+           CCCTC-GAAAACACCATGCTCTGGGGAATCTTGTCCCCAGTTATCTGATTAACATTTGGT
                      ____________________________________________________________
consensus             CCCTCGGAAAACACCATGCTCTGGGGAATCTTGTCCCCAGTTATCTGATTAACATTTGGT
 
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JMFF020C03+           TGCTTCTTACCGATCGGTTTCACAGCAAGCTTCCTTTTTTTATTTTGAAAACGACCCATC
JMSF012H10+           TGCTTCTTACCGATCGGTTTCACAGCAAGCTTCCTTTTTTTATTTTGAAAACGACCCATC
                      ____________________________________________________________
consensus             TGCTTCTTACCGATCGGTTTCACAGCAAGCTTCCTTTTTTTATTTTGAAAACGACCCATC
 
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JMFF020C03+           TCTTCTCAAGTTAGCAAGACACCTTCAAGCCCTTGCGGCGTCTGGCGTCCCGCACCAGTT
JMSF012H10+           TCTTCTCAAGTTAGCAAGACACCTTCAAGCCCTTGCGGCGTCTGGCGTCCCGCACCAGTT
                      ____________________________________________________________
consensus             TCTTCTCAAGTTAGCAAGACACCTTCAAGCCCTTGCGGCGTCTGGCGTCCCGCACCAGTT
 
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JMFF020C03+           TCGGTGGAGGCTGCGAAGAAGACGATTTAGCGAGGGCTTCACTGTGTAGGGTTTCGGTTT
JMSF012H10+           TCGGTGGAGGCTGCGAAGAAGACGATTTAGCGAGGGCTTCACTGTGTAGGGTTTCGGTTT
                      ____________________________________________________________
consensus             TCGGTGGAGGCTGCGAAGAAGACGATTTAGCGAGGGCTTCACTGTGTAGGGTTTCGGTTT
 
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JMFF020C03+           TTTTCGATTTGGATTTTTTCAGTTTTGAACAAATGAAACCAAGTTTGACGTTGTAATTC 
JMSF012H10+           TTTTCGATTTGGATTTTTTCAGTTTTGAACAAATGAAACCAAGTTTGACGTTGTAATTCC
                      ____________________________________________________________
consensus             TTTTCGATTTGGATTTTTTCAGTTTTGAACAAATGAAACCAAGTTTGACGTTGTAATTCC