Contig 011940:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B15Sequence520011940 (8)ref|XP_004250408.1|5e-45PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum]779001314 (7)ref|XP_009588864.1|4e-89PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis]
JMFF037C02Sequence498011940 (8)ref|XP_004250408.1|1e-45PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum]736001314 (7)ref|XP_009794279.1|1e-78PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMFF043F24Sequence644011940 (8)ref|XP_009794279.1|5e-86PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]642024401ref|XP_009794279.1|2e-44PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMSF012G13Sequence480011940 (8)ref|XP_009794279.1|7e-27PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]756001314 (7)ref|XP_009794279.1|1e-88PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMSF013M10Sequence435011940 (8)ref|XP_009794279.1|2e-22PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]749001314 (7)ref|XP_009794279.1|2e-85PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMSF013P07Sequence456011940 (8)ref|XP_004250408.1|2e-41PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Solanum lycopersicum]769001314 (7)ref|XP_009794279.1|1e-90PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMSF026L05Sequence655011940 (8)ref|XP_009794279.1|3e-101PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]707001314 (7)ref|XP_009794279.1|1e-77PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]
JMSF032J10Sequence713011940 (8)ref|XP_009794279.1|4e-41PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]709001314 (7)ref|XP_009794279.1|2e-48PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF026L05+                                                          CTCACATCAAATG
                      ____________________________________________________________
consensus                                                            CTCACATCAAATG
 
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JMSF026L05+           GTCGCAAACGTTTTGCCAGGTGAATCCCGATATTGCCATACCCCATTATGAAGACCGTTT
                      ____________________________________________________________
consensus             GTCGCAAACGTTTTGCCAGGTGAATCCCGATATTGCCATACCCCATTATGAAGACCGTTT
 
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JMSF026L05+           TCCCTAGCAGGGTGTCGCCAATTGGTTCTCCAAGCATTTTCTGCTTTATAGCAATATCCA
                      ____________________________________________________________
consensus             TCCCTAGCAGGGTGTCGCCAATTGGTTCTCCAAGCATTTTCTGCTTTATAGCAATATCCA
 
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JMSF026L05+           TTTCATGTTGTTTACGCAAAAGACCCAATATCAGATATATGGCCATTTCAGCACACGAAG
                      ____________________________________________________________
consensus             TTTCATGTTGTTTACGCAAAAGACCCAATATCAGATATATGGCCATTTCAGCACACGAAG
 
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JMSF026L05+           TTGCATTCCCAGTCGCACCACTCGGGATTCTAGCAACCTTAATGCCATGTGCTGTAGCAG
JMFF037C02+                                                CTTAATGCCATGGGCTGTAGCAG
JMSF013P07+                                                                GTAGCAG
JMFF022B15+                                                CTTAATGCCATGGGCTGTAGCAG
                      ____________________________________________________________
consensus             TTGCATTCCCAGTCGCACCACTCGGGATTCTAGCAACCTTAATGCCATGGGCTGTAGCAG
 
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JMSF026L05+           CAGCGATATCAACACCTTCGAGCCCAACTCCAAACTGCATTATAAGTTTCATCCTCTTTG
JMFF037C02+           CAGTGATGTCAACACCTTCGAGCCCAACTCCAAACTGCATTATAAGTTTCATCCTCTTTG
JMSF013P07+           CAGTGATGTCAACACCTTCGAGCCCAACTCCAAACTGAATTATAAGTTTCATCCTCTTTG
JMFF022B15+           CAGTGATGTCAACACCTTCGAGCCCAACTCCAAACTGCATTATAAGTTTCATCCTCTTTG
JMFF043F24+                          CTTCGAGCCCAACTCCAAACTGCATTATAAGTTTCATCCTCTTTG
JMSF032J10+                          CTTCGAGCCCAACCCCAAACTGCATTATAAGTTTCATCCTCTTTG
                      ____________________________________________________________
consensus             CAGTGATGTCAACACCTTCGAGCCCAACTCCAAACTGCATTATAAGTTTCATCCTCTTTG
 
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JMSF026L05+           CACTAGAGATAAGATCAGAGTTTAGCCGCAAGTTCTTAACTACACATATATCATAGTCTT
JMFF037C02+           CTCTAGAGATAAGATCAGAGTTTAGCCCCAAGTTTTTAACTACACATATATCATAGTCTT
JMSF013P07+           CTCTAGAGATAAGATCAGAGTTTAGCCCCAAGTTTTTAACTACACATATATCATAGTCTT
JMFF022B15+           CTCTAGAGATAAGATCAGAGTTTAGCCCCAAGTTTTTAACTACACATATATCATAGTCTT
JMFF043F24+           CACTAGAGATAAGATCAGAGTTTAGCCGCAAGTTCTTAACTACACATATATCATAGTCTT
JMSF032J10+           CACTAGAGATAAGATCAGAGTTTAGCCGCAAGTTCTTAACTACACATATATCATAGTCTT
JMSF013M10+                                              TTAACTACACATATATCATAGTCTT
JMSF012G13+           CTCTAGAGATAAGATCAGAGTTTAGCCCCAAGTTTTTAACTACACATATATCATAGTCTT
                      ____________________________________________________________
consensus             CTCTAGAGATAAGATCAGAGTTTAGCCCCAAGTTTTTAACTACACATATATCATAGTCTT
 
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JMSF026L05+           TGATCACAGCAGGAACATTTTCAAACGGAATATCATCAACCTGTATAAATGAGTAGCCTT
JMFF037C02+           TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
JMSF013P07+           TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
JMFF022B15+           TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
JMFF043F24+           TGATCACAGCAGGAACATTTTCAAACGGAATATCATCAACCTGTATAAATGAGTAGCCTT
JMSF032J10+           TGATCACAGCAGGAACATTTTCAAACGGAATATCATCAACCTGTATAAATGAGTAGCCTT
JMSF013M10+           TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
JMSF012G13+           TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
                      ____________________________________________________________
consensus             TGATCACAGCAGGAATATAGACGAACGGAATATCATCAACCTGTATAAATGAATAGTCTT
 
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JMSF026L05+           GCACATATTCTCTTGTATAATTATGAGAGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMFF037C02+           TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMSF013P07+           TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMFF022B15+           TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMFF043F24+           GCACATATTCTCTTGTATAATTATGAGAGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMSF032J10+           GCACATATTCTCTTGTATAATTATGAGAGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMSF013M10+           TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
JMSF012G13+           TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
                      ____________________________________________________________
consensus             TCACATATTCTCTTGTATAATTATGAGCGGCAGGAAAATTAGGACCACAAAAGAGAACAC
 
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JMSF026L05+           GGGTAATATGACTACTCCCATTTTCACCCATCTTTAGAATCTTCCCCAATATGCCAGCTG
JMFF037C02+           GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
JMSF013P07+           GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
JMFF022B15+           GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
JMFF043F24+           GGGTAATATGACTACTCCCATTTTCACCCATCTTTAGAATCTTCCCCAATATGCCAGCTG
JMSF032J10+           GGGTAATATGACTACTCCCATTTTCACCCATCTTTAGAATCTTCCCCAATATGCCAGCTG
JMSF013M10+           GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
JMSF012G13+           GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
                      ____________________________________________________________
consensus             GGGTAATGTGACTACTCCCATTTTTACCCATCTTTAGATTCTTCCCCAATATGCCTGCTG
 
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JMSF026L05+           AAGAACAGTGGCGCTGCTGCTGCTGATGATGGCTAAAATTGTGTTCAACAACCCGGCAAC
JMFF037C02+           AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
JMSF013P07+           AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
JMFF022B15+           AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
JMFF043F24+           AAGAACAGTGGCGCTGCTGCTGCTGATGATGGCTAAAATTGTGTTCAACAACCCGGCAAC
JMSF032J10+           AAGAACAGTGGCGCTGCTGCTGCTGATGATGGCTAAAATTGTGTTCAACAACCCGGCAAC
JMSF013M10+           AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
JMSF012G13+           AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
                      ____________________________________________________________
consensus             AGGAACAGTGGCGCTGCTGCTGCTGCTGATGGCTAAAATTGTCTTCAACAACCCGCCAAC
 
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JMSF026L05+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGT                    
JMFF037C02+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
JMSF013P07+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
JMFF022B15+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
JMFF043F24+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAG-TCTTTTCCGTAACGACGATT
JMSF032J10+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAG-TCTTTTCCGTAACGACGATT
JMSF013M10+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
JMSF012G13+           CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
                      ____________________________________________________________
consensus             CACCTCCGCTGGTAGGTGAATTATTGGAGAAGAGTGAAGTTCTTTTCCGTAACGTCGATT
 
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JMFF037C02+           TTACGGCCGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGTTC      
JMSF013P07+           TTACGGCCGTTAAAAGAGAATCTGAGGCA                               
JMFF022B15+           TTACGGCCGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGTTCAGTTTT
JMFF043F24+           TTACGG-CGTTAAAAGAGAATCTGAGGC                                
JMSF032J10+           TTACGG-CGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGCTCAGTTTT
JMSF013M10+           TTACGGCCGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGTTCAGTTTT
JMSF012G13+           TTACGGCCGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGTTCAGTTTT
                      ____________________________________________________________
consensus             TTACGGCCGTTAAAAGAGAATCTGAGGCAGAGCTCCGGTACATCAGGAAGGTTCAGTTTT
 
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JMFF022B15+           ATGGACTCTCTCCTCCT                                           
JMSF032J10+           ATGGATTCTCTCCTCCT                                           
JMSF013M10+           ATGGACTCTCTCCTCCTCCTTCAAAACAAGATTCTCTCTGTTAGCAGTC           
JMSF012G13+           ATGGACTCTCTCCTCCTCCTTCAAAACAAGATTCTCTCTGTTAGCAGTCAAATGATTCTC
                      ____________________________________________________________
consensus             ATGGACTCTCTCCTCCTCCTTCAAAACAAGATTCTCTCTGTTAGCAGTCAAATGATTCTC