Contig 011938:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF017D20+                                                           CGAGAGGAGGGG
                      ____________________________________________________________
consensus                                                             CGAGAGGAGGGG
 
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JMSF017D20+           TGTAGGTGAGGCACTGGAGGACGGAATTGAGATAACAGGTGTTGCCGAGGTTTCTGAGCC
                      ____________________________________________________________
consensus             TGTAGGTGAGGCACTGGAGGACGGAATTGAGATAACAGGTGTTGCCGAGGTTTCTGAGCC
 
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JMSF017D20+           CTACAGGGGGACTGGATTTCCGTTTGTGGCTGAGGAGACTCGGCTGCCAAGTCATTTGCA
                      ____________________________________________________________
consensus             CTACAGGGGGACTGGATTTCCGTTTGTGGCTGAGGAGACTCGGCTGCCAAGTCATTTGCA
 
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JMSF017D20+           GAACGGCCATCAACGACCTGATTCCGCCGCCGCCGCCTCATTGGATGGACCGCCCCGCCG
                      ____________________________________________________________
consensus             GAACGGCCATCAACGACCTGATTCCGCCGCCGCCGCCTCATTGGATGGACCGCCCCGCCG
 
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JMSF017D20+           TGGCCGCTGCAGCCCCCAACAGCAGAGTCTCATAGCCTACCCTCCGCTTCCTATACAACA
JMSF011O04+                                                      CCGCTTCCTATACAACA
                      ____________________________________________________________
consensus             TGGCCGCTGCAGCCCCCAACAGCAGAGTCTCATAGCCTACCCTCCGCTTCCTATACAACA
 
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JMSF017D20+           CAAACCTTATACGTATAAACTTGTATTCCTCTTTCAACCGCAGATTCGGAGGTTTAATTG
JMSF011O04+           CAAACCTTATACGTATAAACTTGTATTCCTCTTTCAACCGCAGATTCGGAGGTTTAATTG
                      ____________________________________________________________
consensus             CAAACCTTATACGTATAAACTTGTATTCCTCTTTCAACCGCAGATTCGGAGGTTTAATTG
 
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JMSF017D20+           TGGTTTATAATCACAGTATTTCGGATATCTGTATTTGTATTTGTGAGGTTTTTGTTTGTG
JMSF011O04+           TGGTTTATAATCACAGTATTTCGGATATCTGTATTTGTATTTGTGAGGTTTTTGTTTGTG
                      ____________________________________________________________
consensus             TGGTTTATAATCACAGTATTTCGGATATCTGTATTTGTATTTGTGAGGTTTTTGTTTGTG
 
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JMSF017D20+           TGAGCGAGCGAGCGAGCGAGCGAGGGAGGGAGCGAGATTTGTAAAGGGAAGAAAAAGAAA
JMSF011O04+           TGAGCGAGCGAGCGAGCGAGCGAGGGAGGGAGCGAGATTTGTAAAGGGAAGAAAAAGAAA
                      ____________________________________________________________
consensus             TGAGCGAGCGAGCGAGCGAGCGAGGGAGGGAGCGAGATTTGTAAAGGGAAGAAAAAGAAA
 
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JMSF017D20+           AGAGGGAAAATGAGGGAGTGAAGAAGAGAAGTAGAGGAGGAAAGCGAAAGCCCCCC    
JMSF011O04+           AGAGGGAAAATGAGGGAGTGAAGAAGAGAAGTAGAGGAGGAAAGCGAAAGCCCCCCCCGC
                      ____________________________________________________________
consensus             AGAGGGAAAATGAGGGAGTGAAGAAGAGAAGTAGAGGAGGAAAGCGAAAGCCCCCCCCGC