Contig 011933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS002E05Sequence552011933 (3)ref|XP_009770277.1|1e-42PREDICTED: uncharacterized protein LOC104221001 isoform X1 [Nicotiana sylvestri
JMFS111H08Sequence620011933 (3)ref|XP_009770277.1|4e-38PREDICTED: uncharacterized protein LOC104221001 isoform X1 [Nicotiana sylvestri
JMSF011G06Sequence404011933 (3)ref|XP_009770277.1|3e-18PREDICTED: uncharacterized protein LOC104221001 isoform X1 [Nicotiana sylvestri710000857 (3)ref|XP_009589098.1|1e-72PREDICTED: uncharacterized protein LOC104086523 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS111H08+              TTCTCTTGCTGCAATAACTCAACTGTGAGTCTGCTTGAACTCGTGCACTTCCTCCAG
                      ____________________________________________________________
consensus                TTCTCTTGCTGCAATAACTCAACTGTGAGTCTGCTTGAACTCGTGCACTTCCTCCAG
 
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JMFS111H08+           CATAATTTCTTTGTTCAGAAGAATCAGCTTGCTGAGGTGGAAGGGGGTCAAGCCCCATTA
JMFS002E05+                                                           CAAGCCCCATTA
                      ____________________________________________________________
consensus             CATAATTTCTTTGTTCAGAAGAATCAGCTTGCTGAGGTGGAAGGGGGTCAAGCCCCATTA
 
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JMFS111H08+           ACTTGGCTACAACACTTGGTGGATTATGTTTAGAGTCTATTGCTCTGGACATTTCTTGTG
JMFS002E05+           ACTTGGCTACAACACTTGGTGGATTATGTTTAGAGTCTATTGCTCTGGACATTTCTTGTG
                      ____________________________________________________________
consensus             ACTTGGCTACAACACTTGGTGGATTATGTTTAGAGTCTATTGCTCTGGACATTTCTTGTG
 
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JMFS111H08+           --ATGAGCATCTTCATTGGTGTTCCATTTGATTTTCTGTTTGAAATAGATCCGCTCAATT
JMFS002E05+           CTATGAGCATCTTCATTGGTGTTCCATTTGATTTTCTGTTTGAAATAGATCCGCTCAATT
                      ____________________________________________________________
consensus             CTATGAGCATCTTCATTGGTGTTCCATTTGATTTTCTGTTTGAAATAGATCCGCTCAATT
 
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JMFS111H08+           TCGACCCAATCACTTCATCCGCGATTTGGTCCTTAAGTGGAGGCATGCTTGCCATGTCAG
JMFS002E05+           TCGACCCAATCACTTCATCCGCGATTTGGTCCTTAAGTGGAGGCATGCTTGCCATGTCAG
JMSF011G06+                           ATCCGCGATTTGGTCCTTAAGTGGAGGCATGCTTGCCATGTCAG
                      ____________________________________________________________
consensus             TCGACCCAATCACTTCATCCGCGATTTGGTCCTTAAGTGGAGGCATGCTTGCCATGTCAG
 
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JMFS111H08+           ATTGGTTCCTTGGAGGAAAACCATCTTGATATGGATTTTCTGTGAGCAACTTGTTTCCAG
JMFS002E05+           ATTGGTTCCTTGGAGGAAAACCATCTTGATATGGATTTTCTGTGAGCAACTTGTTTCCAG
JMSF011G06+           ATTGGTTCCTTGGAGGAAAACCATCTTGATATGGATTTTCTGTGAGCAACTTGTTTCCAG
                      ____________________________________________________________
consensus             ATTGGTTCCTTGGAGGAAAACCATCTTGATATGGATTTTCTGTGAGCAACTTGTTTCCAG
 
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JMFS111H08+           GAACCCCAATATTCAAGTCAAAAAGATTCACCATTCTTCCCAAACATCCTGGAAATGGTT
JMFS002E05+           GAACCCCAATATTCAAGTCAAAAAGATTCACCATTCTTCCCAAACATCCTGGAAATGGTT
JMSF011G06+           GAACCCCAATATTCAAGTCAAAAAGATTCACCATTCTTCCCAAACATCCTGGAAATGGTT
                      ____________________________________________________________
consensus             GAACCCCAATATTCAAGTCAAAAAGATTCACCATTCTTCCCAAACATCCTGGAAATGGTT
 
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JMFS111H08+           CCTTGAGATTGCGAGTTTTTCCCTTCTGAATCCCATTCATAGTGATACCTGATTTGTGCG
JMFS002E05+           CCTTGAGATTGCGAGTTTTTCCCTTCTGAATCCCATTCATAGTGATACCTGATTTGTGCG
JMSF011G06+           CCTTGAGATTGCGAGTTTTTCCCTTCTGAATCCCATTCATAGTGATACCTGATTTGTGCG
                      ____________________________________________________________
consensus             CCTTGAGATTGCGAGTTTTTCCCTTCTGAATCCCATTCATAGTGATACCTGATTTGTGCG
 
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JMFS111H08+           GTTTTAGGTTCTAGATTGAGAAAATGAGTGTCATTGTGTCGCCGGAGCTGAAGCGGGAGT
JMFS002E05+           GTTTTAGGTTCTAGATTGAGAAAATGAGTGTCATTGTGTCGCCGGAGCTGAAGCGGGAGT
JMSF011G06+           GTTTTAGGTTCTAGATTGAGAAAATGAGTGTCATTGTGTCGCCGGAGCTGAAGCGGGAGT
                      ____________________________________________________________
consensus             GTTTTAGGTTCTAGATTGAGAAAATGAGTGTCATTGTGTCGCCGGAGCTGAAGCGGGAGT
 
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JMFS111H08+           ATCGGAAAACTGAAATTCCGAGGATAGTGTCGTCGGAGAATCGGCGATTAATCGGGTCCG
JMFS002E05+           ATCGGAAAACTGAAATTCCGAGGATAGTGTCGTCGGAGAATCGGCGATTAATCGGGTCCG
JMSF011G06+           ATCGGAAAACTGAAATTCCGAGGATAGTGTCGTCGGAGAATCGGCGATTAATCGGGTCCG
                      ____________________________________________________________
consensus             ATCGGAAAACTGAAATTCCGAGGATAGTGTCGTCGGAGAATCGGCGATTAATCGGGTCCG
 
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JMFS111H08+           CTGAGAGATTTCATCATCGTCTGTC                                   
JMFS002E05+           CTGAGAGATTTCATCATCGTCTGTCGACCATGTGTCGGACTCGTCTTGTACTTGTTCTT 
JMSF011G06+           CTGAGAGATTTCATCATCGTCTGTCGACCATGTGTCGGACTCGTCTTGTACTTGTTCTTC
                      ____________________________________________________________
consensus             CTGAGAGATTTCATCATCGTCTGTCGACCATGTGTCGGACTCGTCTTGTACTTGTTCTTC