| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF042O23 | Sequence | 654 | 011930 (4) | emb|CDP19522.1| | 4e-103 | unnamed protein product [Coffea canephora] | 614 | 005868 (3) | ref|XP_006363751.1| | 2e-39 | PREDICTED: VHS domain-containing protein At3g16270-like [Solanum tuberosum] |
| JMFS102B12 | Sequence | 595 | 011930 (4) | emb|CDP19522.1| | 5e-94 | unnamed protein product [Coffea canephora] | |||||
| JMFS109G10 | Sequence | 617 | 011930 (4) | emb|CDP19522.1| | 2e-97 | unnamed protein product [Coffea canephora] | |||||
| JMSF010J17 | Sequence | 299 | 011930 (4) | gb|EPS70576.1| | 1e-18 | hypothetical protein M569_04182 [Genlisea aurea] | 704 | 005868 (3) | ref|XP_004237556.1| | 1e-54 | PREDICTED: VHS domain-containing protein At3g16270 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS109G10+ GATAAA
JMFF042O23+ ACTACCAATTCCAACAACCTCACTGATAAA
____________________________________________________________
consensus ACTACCAATTCCAACAACCTCACTGATAAA
. : . : . : . : . : . :
JMFS109G10+ TGACTTCTTATCTTCTGATGGCATTTCANAGTTAGTATTACCAAAGCCTTGGATTCGACC
JMFS102B12+ TCTGATGGCATTTCAAAGTTAGTATTACCAAAGCCTTGGATTCGACC
JMFF042O23+ TGACTTCTTATCTTCTGATGGCATTTCAAAGTTAGTATTACCAAAGCCTTGGATTCGACC
____________________________________________________________
consensus TGACTTCTTATCTTCTGATGGCATTTCAAAGTTAGTATTACCAAAGCCTTGGATTCGACC
. : . : . : . : . : . :
JMFS109G10+ ACCGAGATTTTCTTTTGGAGCAGGTTTGATGTCATCTGAGGAAGAAAATAGAGCTGATAA
JMFS102B12+ ACCGAGATTTTCTTTTGGAGCAGGTTTGATGTCATCTGAGGAAGAAAATAGAGCTGATAA
JMFF042O23+ ACCGAGATTTTCTTTTGGAGCAGGTTTGATGTCATCTGAGGAAGAAAATAGAGCTGATAA
____________________________________________________________
consensus ACCGAGATTTTCTTTTGGAGCAGGTTTGATGTCATCTGAGGAAGAAAATAGAGCTGATAA
. : . : . : . : . : . :
JMFS109G10+ TGCTTCCTGTGCTGTTTCACGCACTGCCTTGTTAAGTGCATCACCCTTCAGAGGATCTGG
JMFS102B12+ TGCTTCCTGTGCTGTTTCACGCACTGCCTTGTTAAGTGCATCACCCTTCAGAGGATCTGG
JMFF042O23+ TGCTTCCTGTGCTGTTTCACGCACTGCCTTGTTAAGTGCATCACCCTTCAGAGGATCTGG
____________________________________________________________
consensus TGCTTCCTGTGCTGTTTCACGCACTGCCTTGTTAAGTGCATCACCCTTCAGAGGATCTGG
. : . : . : . : . : . :
JMFS109G10+ CTGGCCCTTGTAGTGAATTAACTGGCGTATGGACACAGAATTCCTTTGCATCTCTCTTCT
JMFS102B12+ CTGGCCCTTGTAGTGAATTAACTGGCGTATGGACACAGAATTCCTTTGCATCTCTCTTCT
JMFF042O23+ CTGGCCCTTGTAGTGAATTAACTGGCGTATGGACACAGAATTCCTTTGCATCTCTCTTCT
____________________________________________________________
consensus CTGGCCCTTGTAGTGAATTAACTGGCGTATGGACACAGAATTCCTTTGCATCTCTCTTCT
. : . : . : . : . : . :
JMFS109G10+ GAACTCCGCACCAGACTTTCCTATTGCATACTTGATTACTCTTAGAGCCTTTTGTTTGAC
JMFS102B12+ GAACTCCGCACCAGACTTTCCTATTGCATACTTGATTACTCTTAGAGCCTTTTGTTTGAC
JMFF042O23+ GAACTCCGCACCAGACTTTCCTATTGCATACTTGATTACTCTTAGAGCCTTTTGTTTGAC
____________________________________________________________
consensus GAACTCCGCACCAGACTTTCCTATTGCATACTTGATTACTCTTAGAGCCTTTTGTTTGAC
. : . : . : . : . : . :
JMFS109G10+ AATAGGGGATTTGTGTTGAAGGCGTTTGAGGATGAACTCCGAGACCTCCTTGACGATGCC
JMFS102B12+ AATAGGGGATTTGTGTTGAAGGCGTTTGAGGATGAACTCCGAGACCTCCTTGACGATGCC
JMFF042O23+ AATAGGGGATTTGTGTTGAAGGCGTTTGAGGATGAACTCCGAGACCTCCTTGACGATGCC
____________________________________________________________
consensus AATAGGGGATTTGTGTTGAAGGCGTTTGAGGATGAACTCCGAGACCTCCTTGACGATGCC
. : . : . : . : . : . :
JMFS109G10+ TGCATGAGACGACCGGAGAAGCTCACAGATCTCCTCCAACTTGTAAACCGGAGTGACCTT
JMFS102B12+ TGCATGAGACGACCGGAGAAGCTCACAGATCTCCTCCAACTTGTAAACCGGAGTGACCTT
JMFF042O23+ TGCATGAGACGACCGGAGAAGCTCACAGATCTCCTCCAACTTGTAAACCGGAGTGACCTT
JMSF010J17+ GCATGAGACGACCGGAGAAGCTCACAGATCTCCTCCAACTTGTAAACCGGAGTGACCTT
____________________________________________________________
consensus TGCATGAGACGACCGGAGAAGCTCACAGATCTCCTCCAACTTGTAAACCGGAGTGACCTT
. : . : . : . : . : . :
JMFS109G10+ GTCCTCATCAGAAGTCGCGCCATCGACCATCCGTGACCTCCAATACGACTCCACCGCCCG
JMFS102B12+ GTCCTCATCAGAAGTCGCGCCATCGACCATCCGTGACCTCCAATACGACTCCACCGCCCG
JMFF042O23+ GTCCTCATCAGAAGTCGCGCCATCGACCATCCGTGACCTCCAATACGACTCCACCGCCCG
JMSF010J17+ GTCCTCATCAGAAGTCGCGCCATCGACCATCCGTGACCTCCAATACGACTCCACCGCCCG
____________________________________________________________
consensus GTCCTCATCAGAAGTCGCGCCATCGACCATCCGTGACCTCCAATACGACTCCACCGCCCG
. : . : . : . : . : . :
JMFS109G10+ CCTGCTTTGCTCCATCGCTCCGATAAAATTCTTCGATTGACCGCCTTTCCTCAATCAATC
JMFS102B12+ CCTGCTTTGCTCCATCGCTCCGATCAAATTCTTCGATTGACCGCCTTTCCTCAATCAATC
JMFF042O23+ CCTGCTTTGCTCCATCGCTCCGATCAAATTCTTCGATTGACCGCCTTTCCTCAATCAATC
JMSF010J17+ CCTGCTTTGCTCCATCGCTCCGATCAAATTCTTCGATTGACCGCCTTTCCTCAATCAATC
____________________________________________________________
consensus CCTGCTTTGCTCCATCGCTCCGATCAAATTCTTCGATTGACCGCCTTTCCTCAATCAATC
. : . : . : . : . : . :
JMFS109G10+ CGACGAACAGTCCGATCGATCTCCGCTCCAGAAACAGGAATAGGGCAATTTGGGAGGAGA
JMFS102B12+ CGACGAACAGTCCGATCGATCTCCGCTCCAGAAACAGGAATAGGGCAATTTGGGAGGAGA
JMFF042O23+ CGACGAACAGTCCGATCGATCTCCGCTCCAGAAACAGGAATAGGGCAATTTGGGAGGAGA
JMSF010J17+ CGACGAACAGTCCGATCGATCTCCGCTCCAGAAACAGGAATAGGGCAATTTGGGAGGAGA
____________________________________________________________
consensus CGACGAACAGTCCGATCGATCTCCGCTCCAGAAACAGGAATAGGGCAATTTGGGAGGAGA
. : . : . : . : . : . :
JMFS109G10+ AGAAGATC
JMFS102B12+ AGAAGATC
JMFF042O23+ AGAAGATCGCTGTCGTTGAGCTTT
JMSF010J17+ AGAAGATCGCTGTCGTTGAGCTTTGAGAAGTGAAACGTGAGAAATCTCGAGAAGTTATCC
____________________________________________________________
consensus AGAAGATCGCTGTCGTTGAGCTTTGAGAAGTGAAACGTGAGAAATCTCGAGAAGTTATCC