Contig 011926:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P20Sequence498011926 (2)emb|CDP03632.1|2e-59unnamed protein product [Coffea canephora]787008184 (2)ref|XP_011082559.1|4e-108PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum]
JMSF009N10Sequence256011926 (2)emb|CDP03632.1|1e-15unnamed protein product [Coffea canephora]726008184 (2)ref|XP_011082559.1|3e-110PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF012P20+                                                    CTCTTCAGAATACTANCAA
                      ____________________________________________________________
consensus                                                      CTCTTCAGAATACTANCAA
 
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JMFF012P20+           GATGAGGCAGAGCTCCAGCATCAACAATTAGTTGTTGGTGTTCTGGTTTTATGGCAAGCA
                      ____________________________________________________________
consensus             GATGAGGCAGAGCTCCAGCATCAACAATTAGTTGTTGGTGTTCTGGTTTTATGGCAAGCA
 
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JMFF012P20+           TCCCAAGCGAAAAAGCACTCCCTTTCTCGATCTCGTGCTCATACGGGATTGGGCCAGCGT
                      ____________________________________________________________
consensus             TCCCAAGCGAAAAAGCACTCCCTTTCTCGATCTCGTGCTCATACGGGATTGGGCCAGCGT
 
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JMFF012P20+           CTCCATCCCTTGTAGGTGGAGGAGGCGGCGGCTGGAGATGCTGCACAAGAGCCGGAACTG
                      ____________________________________________________________
consensus             CTCCATCCCTTGTAGGTGGAGGAGGCGGCGGCTGGAGATGCTGCACAAGAGCCGGAACTG
 
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JMFF012P20+           CGCCACAATCCACAATCACGTTCACAATTTCCTCATTCTTGGCCAACTCGGAAAGAATAT
JMSF009N10+                                                       AACTCGGAAAGAATAT
                      ____________________________________________________________
consensus             CGCCACAATCCACAATCACGTTCACAATTTCCTCATTCTTGGCCAACTCGGAAAGAATAT
 
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JMFF012P20+           GGATGGCGCGCTTGGAGGAAGCTCGATCCGGCTCGGCTGAAGAGAAAGACGCTCCGAGAA
JMSF009N10+           GGATGGCGCGCTTGGAGGAAGCTCGATCCGGCTCGGCTGAAGAGAAAGACGCTCCGAGAA
                      ____________________________________________________________
consensus             GGATGGCGCGCTTGGAGGAAGCTCGATCCGGCTCGGCTGAAGAGAAAGACGCTCCGAGAA
 
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JMFF012P20+           TCTCCACCTGAGCGCGGACCTCACGGGTGATATCTTGATGAGCATCCTCAGGTGAGAGAG
JMSF009N10+           TCTCCACCTGAGCGCGGACCTCACGGGTGATATCTTGATGAGCATCCTCAGGTGAGAGAG
                      ____________________________________________________________
consensus             TCTCCACCTGAGCGCGGACCTCACGGGTGATATCTTGATGAGCATCCTCAGGTGAGAGAG
 
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JMFF012P20+           AAACTATCCTCAAGCGATCGTCTTCAAAATCCTCGTCTAGCTTCCTCTTCAAGCTCTTCT
JMSF009N10+           AAACTATCCTCAAGCGATCGTCTTCAAAATCCTCGTCTAGCTTCCTCTTCAAGCTCTTCT
                      ____________________________________________________________
consensus             AAACTATCCTCAAGCGATCGTCTTCAAAATCCTCGTCTAGCTTCCTCTTCAAGCTCTTCT
 
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JMFF012P20+           TCGAAGTGGAGCTTGAAGAGTGCTCGCTGCGCCTCAGGTTCTCCATGGGAGAGAAGATC 
JMSF009N10+           TCGAAGTGGAGCTTGAAGAGTGCTCGCTGCGCCTCAGGTTCTCCATGGGAGAGAAGATCC
                      ____________________________________________________________
consensus             TCGAAGTGGAGCTTGAAGAGTGCTCGCTGCGCCTCAGGTTCTCCATGGGAGAGAAGATCC