Contig 011925:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS024G03Sequence606011925 (2)
JMSF009L03Sequence312011925 (2)744002778 (2)ref|XP_011038162.1|152PREDICTED: uncharacterized protein LOC105135133 [Populus euphratica]

Alignment

This contig is upended


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JMFS024G03+                                                   CGAGCAAAGCCCACCCATCT
                      ____________________________________________________________
consensus                                                     CGAGCAAAGCCCACCCATCT
 
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JMFS024G03+           TGCTGTAATTAAGCTTAACCTAATTCAATCTCAAGCTTTCCATCAAAAAATCAAAAGAAC
                      ____________________________________________________________
consensus             TGCTGTAATTAAGCTTAACCTAATTCAATCTCAAGCTTTCCATCAAAAAATCAAAAGAAC
 
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JMFS024G03+           CAAAATATGTACAGTTCCCAAATGAGCTGCCTGCTGCAAAGTACAAAACAGACCCTGTTT
                      ____________________________________________________________
consensus             CAAAATATGTACAGTTCCCAAATGAGCTGCCTGCTGCAAAGTACAAAACAGACCCTGTTT
 
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JMFS024G03+           GTGGAAGTCAATGATAAGACCAATTCAGCGCAACAACTGGATTTCAAGTAAACCAGTCTC
                      ____________________________________________________________
consensus             GTGGAAGTCAATGATAAGACCAATTCAGCGCAACAACTGGATTTCAAGTAAACCAGTCTC
 
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JMFS024G03+           AAGTCTGTGTCCAGAACTTGACTACGTTCTTGACCAAACTTTCCCTACTCTAAGCAGATG
                      ____________________________________________________________
consensus             AAGTCTGTGTCCAGAACTTGACTACGTTCTTGACCAAACTTTCCCTACTCTAAGCAGATG
 
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JMFS024G03+           TAGCCAAGTCAATTAAAGTCAAACAAGATAGAGAGAAGGAGAAAAGAAGACGAAGAGCTG
                      ____________________________________________________________
consensus             TAGCCAAGTCAATTAAAGTCAAACAAGATAGAGAGAAGGAGAAAAGAAGACGAAGAGCTG
 
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JMFS024G03+           GATCTAAGAGGAGATTGCTATGTGGATTCTAGTAGCTGCCGATTATAAATATGATGAATG
JMSF009L03+                                                           ATATGATGAATG
                      ____________________________________________________________
consensus             GATCTAAGAGGAGATTGCTATGTGGATTCTAGTAGCTGCCGATTATAAATATGATGAATG
 
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JMFS024G03+           TACAGATTGAGGCTTTGTTGATCGCGTCCAAATGCTGGTCCGCGTTGGGAGTTGGGGGTT
JMSF009L03+           TACAGATTGAGGCTTTGTTGATCGCGTCCAAATNCTGGTCCGCGTTGGGAGNTGGGGGTT
                      ____________________________________________________________
consensus             TACAGATTGAGGCTTTGTTGATCGCGTCCAAATGCTGGTCCGCGTTGGGAGTTGGGGGTT
 
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JMFS024G03+           GAGTAGCGGTGTCCGGTGCGCCGGTGAGAGGAGTAGCCCAA                   
JMSF009L03+           GAGTAGCGGTGTCCGGTGCGCCGGTGAGAGGAGTAGCCCAACTCTCTCTCTCTCTCTCTC
                      ____________________________________________________________
consensus             GAGTAGCGGTGTCCGGTGCGCCGGTGAGAGGAGTAGCCCAACTCTCTCTCTCTCTCTCTC
 
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JMSF009L03+           TCTCTCTCTCTCTCTAACGTGGTCTGTAAGGCTGTAAATACCAAACCGAACCGACTAGGC
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTAACGTGGTCTGTAAGGCTGTAAATACCAAACCGAACCGACTAGGC
 
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JMSF009L03+           GGCTGACGCACCGCCGTCTCTCTCTTTCTCTCTCTCTTTCTCTTCTGGTCAAAGCCCCGA
                      ____________________________________________________________
consensus             GGCTGACGCACCGCCGTCTCTCTCTTTCTCTCTCTCTTTCTCTTCTGGTCAAAGCCCCGA
 
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JMSF009L03+           GAAACGAGAGCTTCGCTCCAAGCCCAGCCAGTTACAACACATACGACATGCTACACTACC
                      ____________________________________________________________
consensus             GAAACGAGAGCTTCGCTCCAAGCCCAGCCAGTTACAACACATACGACATGCTACACTACC