| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K16 | Sequence | 257 | 011924 (7) | 716 | 013745 (6) | emb|CDP19310.1| | 3e-42 | unnamed protein product [Coffea canephora] | |||
| JMFF030C10 | Sequence | 563 | 011924 (7) | ref|XP_009588392.1| | 2e-57 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 738 | 013745 (6) | emb|CDP19310.1| | 2e-10 | unnamed protein product [Coffea canephora] |
| JMFF036I03 | Sequence | 557 | 011924 (7) | ref|XP_009588392.1| | 6e-57 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 727 | 013745 (6) | emb|CDP19310.1| | 6e-45 | unnamed protein product [Coffea canephora] |
| JMFF037E22 | Sequence | 626 | 011924 (7) | ref|XP_009588392.1| | 1e-79 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 743 | 013745 (6) | emb|CDP19310.1| | 1e-47 | unnamed protein product [Coffea canephora] |
| JMFS107B09 | Sequence | 627 | 011924 (7) | ref|XP_009588392.1| | 3e-86 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | |||||
| JMFS111E08 | Sequence | 642 | 011924 (7) | ref|XP_009588392.1| | 1e-47 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | |||||
| JMSF009K03 | Sequence | 371 | 011924 (7) | 767 | 013745 (6) | emb|CDP19310.1| | 1e-53 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMFS107B09+ AAGCACCC
____________________________________________________________
consensus AAGCACCC
. : . : . : . : . : . :
JMFS107B09+ AGGGCCATCATTGATGGATGTGCTAATATAAGCTCTCCAGCAAGTAGTACAAAAGGGATG
JMFF037E22+ GCTAATATAAGCTCTCCAGCAAGTAGTACAAAAGGGATG
____________________________________________________________
consensus AGGGCCATCATTGATGGATGTGCTAATATAAGCTCTCCAGCAAGTAGTACAAAAGGGATG
. : . : . : . : . : . :
JMFS107B09+ ACCACATGCAGCAGTAACCAGCACATGAGAAGGATAGTTATCAAAGCATATGCCACACAC
JMFF037E22+ ACCACATGCAGCAGTAACCAGCACATGAGAAGGATAGTTATCAAAGCATATGCCACACAC
____________________________________________________________
consensus ACCACATGCAGCAGTAACCAGCACATGAGAAGGATAGTTATCAAAGCATATGCCACACAC
. : . : . : . : . : . :
JMFS107B09+ CACTTCCTTAACATTGGATGGTTGAAGAAAAGACTTTTCCAACAAGCCAACAGTTTTCCG
JMFF037E22+ CACTTCCTTAACATTGGATGGTTGAAGAAAAGACTTTTCCAACAAGCCAACAGTTTTCCG
JMFF030C10+ ATTGGATGGTTGAAGAAAAGACTTTTCCAACAAGCCAACAGTTTTCCG
JMFF036I03+ ATTGGATGGTTGAAGAAAAGACTTTTCCAACAAGCCAACAGTTTTCCG
____________________________________________________________
consensus CACTTCCTTAACATTGGATGGTTGAAGAAAAGACTTTTCCAACAAGCCAACAGTTTTCCG
. : . : . : . : . : . :
JMFS107B09+ GACTCTTTCCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
JMFF037E22+ GACTCTTTCCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
JMFF030C10+ GACTCTTTCCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
JMFF036I03+ GACTCTTTCCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
JMFS111E08+ CCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
____________________________________________________________
consensus GACTCTTTCCTCATCAGCAAACCATTCCTCGTGCACCTTGTTCACACTCCAATTATAGCG
. : . : . : . : . : . :
JMFS107B09+ GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
JMFF037E22+ GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
JMFF030C10+ GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
JMFF036I03+ GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
JMFS111E08+ GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
____________________________________________________________
consensus GCGTAAAAGTATGCATGCTGCTTCCCTTGGTATGGAAAGGACAGCAGAAATTCTATTTAT
. : . : . : . : . : . :
JMFS107B09+ ATCATCCTCTTGTCTTTGGCGTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
JMFF037E22+ ATCATCCTCTTGTCTTTGGCGTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
JMFF030C10+ ATCATCCTCTTGTCTTTGGCTTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
JMFF036I03+ ATCATCCTCTTGTCTTTGGCGTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
JMFS111E08+ ATCATCCTCTTGTCTTTGGCGTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
____________________________________________________________
consensus ATCATCCTCTTGTCTTTGGCGTATGTCTTCTTCTTTCAAGACAGTGTAATTTTTCTGAGA
. : . : . : . : . : . :
JMFS107B09+ ACGACTGGTAGTGAGCTCATCAGAGTCATCAAACTCGTTGCCCATAAATTCGTAGTCAGC
JMFF037E22+ ACGACTGGTAGTGAGCTCATCAGAGTCATCAGACTCGTTGCCCATAAATTCGTAGTCAGC
JMFF030C10+ ACGACTGGTAGTGAGCTCATCAGAGTCATCAGACTCGTTGCCCATAAATTCGTAGTCAGC
JMFF036I03+ ACGACTGGTAGTGAGCTCATCAGAGTCATCAGACTCGTTGCCCATAAATTCGTAGTCAGC
JMFS111E08+ ACGACTGGTAGTGAGCTCATCAGAGTCATCAGACTCGTTGCCCATAAATTCGTAGTCAGC
____________________________________________________________
consensus ACGACTGGTAGTGAGCTCATCAGAGTCATCAGACTCGTTGCCCATAAATTCGTAGTCAGC
. : . : . : . : . : . :
JMFS107B09+ TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
JMFF037E22+ TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
JMFF030C10+ TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
JMFF003K16+ GCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCNATA
JMFF036I03+ TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
JMFS111E08+ TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
JMSF009K03+ CCATCGCTATA
____________________________________________________________
consensus TAAATCGGCGTCGCTGTCGCCGACGGCATCCCCGTAGCCGTAGCCTTCGCCATCGCTATA
. : . : . : . : . : . :
JMFS107B09+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMFF037E22+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMFF030C10+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMFF003K16+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMFF036I03+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMFS111E08+ GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
JMSF009K03+ GAAGTCCTCGTCTACGGACTCGAGGTCGTNGGCGTCGTGCATATCGTCATCGGACTCCAT
____________________________________________________________
consensus GAAGTCCTCGTCTACGGACTCGAGGTCGTTGGCGTCGTGCATATCGTCATCGGACTCCAT
. : . : . : . : . : . :
JMFS107B09+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
JMFF037E22+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
JMFF030C10+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
JMFF003K16+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTNGAAGC
JMFF036I03+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
JMFS111E08+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
JMSF009K03+ CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
____________________________________________________________
consensus CGGAAGCAGAAATGAAAACCCAGAACCCTAATGAAACCCTAGCACAGCTTGCGTCGAAGC
. : . : . : . : . : . :
JMFS107B09+ TGATCGAGCTCAGCGATCA
JMFF037E22+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGC
JMFF030C10+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
JMFF003K16+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
JMFF036I03+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
JMFS111E08+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
JMSF009K03+ TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
____________________________________________________________
consensus TGATCGAGCTCAGCGATCATGAATAAATTGGAGCACAGATTGGAAGCGATCGAACACTTG
. : . : . : . : . : . :
JMFF030C10+ AACAAATTCTACGGATGAATGATTAAACT
JMFF003K16+ AACAAATTNTACGGATGAATGATTAAACT
JMFF036I03+ AACAAATTCTACGGATGAATGATTAAACT
JMFS111E08+ AACAAATTCTACGGATGAATGATTAAACTGACGAAAATTGATAATTAGGCATAGATACAT
JMSF009K03+ AACAAATTCTACGGATGAATGATTAAACTGACGAAAATTGATAATTAGGCATAGATACAT
____________________________________________________________
consensus AACAAATTCTACGGATGAATGATTAAACTGACGAAAATTGATAATTAGGCATAGATACAT
. : . : . : . : . : . :
JMFS111E08+ GCACGCAGATAGATACACACGTATTCTTGGCCTCTTTTGGGTCGGGTGGAGGGTTTGGTA
JMSF009K03+ GCACGCAGATAGATACACACGTATTCTTGGCCTCTTTTGGGTCGGGTGGAGGGTTTGGTA
____________________________________________________________
consensus GCACGCAGATAGATACACACGTATTCTTGGCCTCTTTTGGGTCGGGTGGAGGGTTTGGTA
. : . : . : . : . : . :
JMFS111E08+ AAGAAGTTCGGTTTTGGTTTTGGATTTGGTTTTCTTAGAAAAGTGGTTTC
JMSF009K03+ AAGAAGTTCGGTTTTGGTTTTGGATTTGGTTTTCTTAGAAAAGTGGTTTCGTCTCCAGGC
____________________________________________________________
consensus AAGAAGTTCGGTTTTGGTTTTGGATTTGGTTTTCTTAGAAAAGTGGTTTCGTCTCCAGGC