Contig 011922:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009D15Sequence228011922 (2)765002909 (2)ref|XP_006343955.1|266PREDICTED: uncharacterized protein LOC102590970 [Solanum tuberosum]
JMSF032C06Sequence707011922 (2)ref|XP_011022644.1|8e-13PREDICTED: uncharacterized protein LOC105124354 isoform X1 [Populus euphratica]707002909 (2)ref|XP_006343955.1|203PREDICTED: uncharacterized protein LOC102590970 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF032C06+                       TCCCGTCACAACGACTTTGGTGTGCCTCGGAAGAACAGACAATTCTTC
                      ____________________________________________________________
consensus                         TCCCGTCACAACGACTTTGGTGTGCCTCGGAAGAACAGACAATTCTTC
 
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JMSF032C06+           ATCACCACTCTCCTCACGAAAAGGAGATAAGACCCGAGTAGAACATAGTTCAGTCCCCAT
                      ____________________________________________________________
consensus             ATCACCACTCTCCTCACGAAAAGGAGATAAGACCCGAGTAGAACATAGTTCAGTCCCCAT
 
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JMSF032C06+           CATTTTGTTAGCGTGAATTGGTCTTCTTAATCCAAAGAGCAAGGAATTTTTCACAATGAC
                      ____________________________________________________________
consensus             CATTTTGTTAGCGTGAATTGGTCTTCTTAATCCAAAGAGCAAGGAATTTTTCACAATGAC
 
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JMSF032C06+           CCACTCAAGTTATCAACAGGGATCAACTAAATTAGCTACTAGTGCTCCATGAAAATGCTG
                      ____________________________________________________________
consensus             CCACTCAAGTTATCAACAGGGATCAACTAAATTAGCTACTAGTGCTCCATGAAAATGCTG
 
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JMSF032C06+           GAATTCTACATAATTCAAAAATCCCTTCTCTTCTGTTTCTTGATTTTGAGAAAGAATATG
                      ____________________________________________________________
consensus             GAATTCTACATAATTCAAAAATCCCTTCTCTTCTGTTTCTTGATTTTGAGAAAGAATATG
 
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JMSF032C06+           AATTGGGAAGGAACAAATTACCAATTAGTACAACTGGGAAAGCAATACTCCTCCACAAAT
                      ____________________________________________________________
consensus             AATTGGGAAGGAACAAATTACCAATTAGTACAACTGGGAAAGCAATACTCCTCCACAAAT
 
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JMSF032C06+           CTTCCTACCTACTTATTTCAACTTCATAGAGTTCAGCTCTGAAATGGGGATATAATCAGA
                      ____________________________________________________________
consensus             CTTCCTACCTACTTATTTCAACTTCATAGAGTTCAGCTCTGAAATGGGGATATAATCAGA
 
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JMSF032C06+           AGCAGCATTTACGAAGAACAGCTCAATCTTCAAATTGAATTCCTTGATAAAGAGCAAGGA
                      ____________________________________________________________
consensus             AGCAGCATTTACGAAGAACAGCTCAATCTTCAAATTGAATTCCTTGATAAAGAGCAAGGA
 
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JMSF032C06+           AATGCAATGCGTCTCCGCTCAGAGTGAGATGACAGTGGAAACAGGGGATTCAGAGGCCGA
JMSF009D15+                       CTCCGCTCAGAGTGAGATGACAGTGGAAACAGGGGATTCAGAGGCCGA
                      ____________________________________________________________
consensus             AATGCAATGCGTCTCCGCTCAGAGTGAGATGACAGTGGAAACAGGGGATTCAGAGGCCGA
 
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JMSF032C06+           AAATTCCAGTTTTGCAATCAGATTATGGTGAAATGCTAGCCTTCTCTGAGAAAATTGTAC
JMSF009D15+           AAATTCCAGTTTTGCAATCAGATTATGGTGAAATGCTAGCCTTCTCTGAGAAAATTGTAC
                      ____________________________________________________________
consensus             AAATTCCAGTTTTGCAATCAGATTATGGTGAAATGCTAGCCTTCTCTGAGAAAATTGTAC
 
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JMSF032C06+           CAATTTTGAGGATTGAAGAGTGTGAGAGTAGTGTGTGTCCGAATATATATTATATATATA
JMSF009D15+           CAATTTTGAGGATTGAAGAGTGTGAGAGTAGTGTGTGTCCGAATATATATTATATATATA
                      ____________________________________________________________
consensus             CAATTTTGAGGATTGAAGAGTGTGAGAGTAGTGTGTGTCCGAATATATATTATATATATA
 
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JMSF032C06+           GAGAGAGATAGAGAGAGAGAAATGAAGAGAGAGAGCATACACTAAATGCTTACCAAC   
JMSF009D15+           GAGAGAGATAGAGAGAGAGAAATGAAGAGAGAGAGCATACACTAAATGCTTACCAACTCA
                      ____________________________________________________________
consensus             GAGAGAGATAGAGAGAGAGAAATGAAGAGAGAGAGCATACACTAAATGCTTACCAACTCA