Contig 011920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008O11Sequence252011920 (2)709017081ref|XP_009611560.1|119PREDICTED: uncharacterized protein LOC104105039 [Nicotiana tomentosiformis]
JMSF033I13Sequence616011920 (2)ref|XP_009611560.1|150PREDICTED: uncharacterized protein LOC104105039 [Nicotiana tomentosiformis]670020443ref|XP_009763085.1|70.5PREDICTED: uncharacterized protein LOC104215042 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF033I13+                                       AAGCTGTCAGATAAAAGTGCTGTTATAAAGAA
                      ____________________________________________________________
consensus                                         AAGCTGTCAGATAAAAGTGCTGTTATAAAGAA
 
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JMSF033I13+           CAAAAAGAATTGTGGGAAGGATGTACTAGAAAGGACCTCTGGTGATAAGTTAAAGGAGTC
                      ____________________________________________________________
consensus             CAAAAAGAATTGTGGGAAGGATGTACTAGAAAGGACCTCTGGTGATAAGTTAAAGGAGTC
 
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JMSF033I13+           TAAGTTGGATGCACATAGAGAACTGCAAGCAAGTTCTGATAAATCAAGGCTGATATCTGG
                      ____________________________________________________________
consensus             TAAGTTGGATGCACATAGAGAACTGCAAGCAAGTTCTGATAAATCAAGGCTGATATCTGG
 
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JMSF033I13+           GAAAATTATGAAGGGGACTTCATTGTTTGGAATAGCTTCCACTAGGGAAGCTATAGTGCA
                      ____________________________________________________________
consensus             GAAAATTATGAAGGGGACTTCATTGTTTGGAATAGCTTCCACTAGGGAAGCTATAGTGCA
 
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JMSF033I13+           TACAGAAGAGGCACCAGCAGCTCCTTTTCTTATTGAGGACTGGGTCCAATGTGAGAAATG
                      ____________________________________________________________
consensus             TACAGAAGAGGCACCAGCAGCTCCTTTTCTTATTGAGGACTGGGTCCAATGTGAGAAATG
 
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JMSF033I13+           CGAAAAGTGGCGTCTTCTACCACAGGGTATGAAACCTGATCATTTGCCCTCAACTTGGGT
                      ____________________________________________________________
consensus             CGAAAAGTGGCGTCTTCTACCACAGGGTATGAAACCTGATCATTTGCCCTCAACTTGGGT
 
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JMSF033I13+           ATGCAGCATGCTAAACTGGCTGCCTGGAATGAACAGCTGTGACTTCACTGAGGATCAAAC
                      ____________________________________________________________
consensus             ATGCAGCATGCTAAACTGGCTGCCTGGAATGAACAGCTGTGACTTCACTGAGGATCAAAC
 
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JMSF033I13+           AACTGGAGGTCTTAATGCTTTATATGAGAATCCAAATAACCTTCAAACTTATGCCGCTAA
JMSF008O11+                                                           TTATGCCGCTAA
                      ____________________________________________________________
consensus             AACTGGAGGTCTTAATGCTTTATATGAGAATCCAAATAACCTTCAAACTTATGCCGCTAA
 
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JMSF033I13+           AATTGAGGGTGGAGTAGTAAATCCAGCCAATGCTTGTGACACGGCCAATCTAGGAAGGAA
JMSF008O11+           AATTGAGGGTGGAGTAGTAAATCCAGCCAATGCTTGTGACACGGCCAATCTAGGAAGGAA
                      ____________________________________________________________
consensus             AATTGAGGGTGGAGTAGTAAATCCAGCCAATGCTTGTGACACGGCCAATCTAGGAAGGAA
 
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JMSF033I13+           AAAACATAAAGTGAAGACAAGTAAAAATGATGAATTACTTGCTGCAACAAACTTTACCAG
JMSF008O11+           AAAACATAAAGTGAAGACAAGTAAAAATGATGAATTACTTGCTGCAACAAACTTTACCAG
                      ____________________________________________________________
consensus             AAAACATAAAGTGAAGACAAGTAAAAATGATGAATTACTTGCTGCAACAAACTTTACCAG
 
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JMSF033I13+           GAGCATCCAGGGAGAACATGTAGTTATTGGTGATGAAAAGTGT                 
JMSF008O11+           GAGCATCCAGGGAGAACATGTAGTTATTGGTGATGAAAAGTGTAGAAAGAAAATAAAAAG
                      ____________________________________________________________
consensus             GAGCATCCAGGGAGAACATGTAGTTATTGGTGATGAAAAGTGTAGAAAGAAAATAAAAAG
 
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JMSF008O11+           AGAGCCCAACTTATCGGACTATAAGGATGTGAAGAAGATAAAAGCTGATACAAAAGGGTC
                      ____________________________________________________________
consensus             AGAGCCCAACTTATCGGACTATAAGGATGTGAAGAAGATAAAAGCTGATACAAAAGGGTC