Contig 011918:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS091E10+                                             CGGAAGTCAGTTGCAACTCGATCATT
                      ____________________________________________________________
consensus                                               CGGAAGTCAGTTGCAACTCGATCATT
 
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JMFS091E10+           TCAACTCCTAGCAGTATGAAGCTTCTTTGCAGATTCACCCACTAAATCAGTAAGAGCTGC
                      ____________________________________________________________
consensus             TCAACTCCTAGCAGTATGAAGCTTCTTTGCAGATTCACCCACTAAATCAGTAAGAGCTGC
 
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JMFS091E10+           TTCAATGTTCATGTGCACATCCGCTCTGTCAGCCCTCCACAAGAACTTGCCTGCTTCAAT
                      ____________________________________________________________
consensus             TTCAATGTTCATGTGCACATCCGCTCTGTCAGCCCTCCACAAGAACTTGCCTGCTTCAAT
 
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JMFS091E10+           CTGCCTTTCTATCTCCTCTAGACCTCGTAGAATTGTATCCTTACGATACACCAAAACAAT
                      ____________________________________________________________
consensus             CTGCCTTTCTATCTCCTCTAGACCTCGTAGAATTGTATCCTTACGATACACCAAAACAAT
 
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JMFS091E10+           TGTGCACATTTGAATACTACTCTTTCACATTTCACTTGTTAAGGAAATAGAAGTCATGAA
                      ____________________________________________________________
consensus             TGTGCACATTTGAATACTACTCTTTCACATTTCACTTGTTAAGGAAATAGAAGTCATGAA
 
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JMFS091E10+           CTATAGATTATAAACCAAGAACCCTAACAATAGATTAAGAAATATAGAACCCTAACCATT
                      ____________________________________________________________
consensus             CTATAGATTATAAACCAAGAACCCTAACAATAGATTAAGAAATATAGAACCCTAACCATT
 
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JMFS091E10+           ACATCGTCGATCGAGGAAAAGAGCTAAGGAGGAGAAGGCGTCGTCGATGGAGGAGAAGAG
                      ____________________________________________________________
consensus             ACATCGTCGATCGAGGAAAAGAGCTAAGGAGGAGAAGGCGTCGTCGATGGAGGAGAAGAG
 
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JMFS091E10+           CAAGGGAGGAGAAGAGCAAGGGAGGAGACGTCGTCCTTCGAGGAAAAGAACTGGAGAGGA
JMSF008M16+                        GAGCAAGGGAGGAGACGTCGTCNTTCGAGGAAAAGAACTGGAGANGA
                      ____________________________________________________________
consensus             CAAGGGAGGAGAAGAGCAAGGGAGGAGACGTCGTCCTTCGAGGAAAAGAACTGGAGAGGA
 
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JMFS091E10+           GAAGGTTTAAATCTGTGATTGAGGAGAAGAGGTAAGGAGGGGAAGGATTGAGTTGAAATC
JMSF008M16+           GAAGGTTTNAATCTGTGNNTGAGGAGAAGAGGTAAGGAGGGGAAGGATTGAGTTGAAATC
                      ____________________________________________________________
consensus             GAAGGTTTAAATCTGTGATTGAGGAGAAGAGGTAAGGAGGGGAAGGATTGAGTTGAAATC
 
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JMFS091E10+           TGCGTTTGAGGTGAAGAGGTAGGGAGGAAAAGGTTTTGCGTTTGAGGAGAAGGTTTAGAT
JMSF008M16+           TGCGTNTGAGGTGAAGAGGTAGGGAGGAAAAGNTTTTNCGTTTGAGGAGAAGGTTTAGAT
                      ____________________________________________________________
consensus             TGCGTTTGAGGTGAAGAGGTAGGGAGGAAAAGGTTTTGCGTTTGAGGAGAAGGTTTAGAT
 
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JMFS091E10+           CTAGCTGCGAAGGCAATCCCGACGGCTTCATCAGCGTAGATGATTTAGG           
JMSF008M16+           CTAGCTGCGAAGGCAATCCCGACGGCTTCATCAGCGTAGATGATTTAGGGCANTTNCGCC
                      ____________________________________________________________
consensus             CTAGCTGCGAAGGCAATCCCGACGGCTTCATCAGCGTAGATGATTTAGGGCANTTNCGCC