Contig 011913:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008D02Sequence306011913 (2)758008950 (3)ref|XP_009616234.1|2e-28PREDICTED: aluminum-activated malate transporter 9 [Nicotiana tomentosiformis]
JMSF018H12Sequence504011913 (2)ref|XP_009764790.1|3e-54PREDICTED: aluminum-activated malate transporter 9 [Nicotiana sylvestris]755008950 (3)ref|XP_009616234.1|1e-26PREDICTED: aluminum-activated malate transporter 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+                                                            CAAGAGCAAGT
                      ____________________________________________________________
consensus                                                              CAAGAGCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           CCTCCAGCTGATAGTGTCCCCAATCCTCGGTTAAATCCTTTGCTAAGAGTGGCACCTATG
                      ____________________________________________________________
consensus             CCTCCAGCTGATAGTGTCCCCAATCCTCGGTTAAATCCTTTGCTAAGAGTGGCACCTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           CTGAACTCAAAAACAACAACAACTGTAAGAATAGCCCACACGGAGTATTTACTGAGCTCC
                      ____________________________________________________________
consensus             CTGAACTCAAAAACAACAACAACTGTAAGAATAGCCCACACGGAGTATTTACTGAGCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           GCCACCGGCTCCTTGAAGAATATGAGCAGAGATATGAGCATCAACGCCAGTCCCATCTTG
                      ____________________________________________________________
consensus             GCCACCGGCTCCTTGAAGAATATGAGCAGAGATATGAGCATCAACGCCAGTCCCATCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           GCGGAGAAAATGATCTTTCTCGGGTCGGATCGACCCATCTGCCACGCCTTCATGGCCACG
                      ____________________________________________________________
consensus             GCGGAGAAAATGATCTTTCTCGGGTCGGATCGACCCATCTGCCACGCCTTCATGGCCACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           CTCCGGATACTCTCCCATAGCTTCGCAACCTTCTTCCGAGCCGCGGAGCAGAAGCCGAAG
                      ____________________________________________________________
consensus             CTCCGGATACTCTCCCATAGCTTCGCAACCTTCTTCCGAGCCGCGGAGCAGAAGCCGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           CCGAAGCCGCAGAACTTTGGCCTCTCTCGGCAGTCGAGAGAGCGAGCAAACCCCGGGAGC
                      ____________________________________________________________
consensus             CCGAAGCCGCAGAACTTTGGCCTCTCTCGGCAGTCGAGAGAGCGAGCAAACCCCGGGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           TCGGAGTAGTCGGCGTTGCACACCGGCGATAAAAGCCTCTCCCTTTCTCTCTTCTCCGCA
JMSF008D02+                                                                 TCCGCA
                      ____________________________________________________________
consensus             TCGGAGTAGTCGGCGTTGCACACCGGCGATAAAAGCCTCTCCCTTTCTCTCTTCTCCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           AAGCTCTGCCGAAAGGACCCCAATTTCCTGGACATTCTTGATTCTGTTTCTATATCTCTA
JMSF008D02+           AAGCTCTGCCGAAAGGACCCCAATTTCCTGGACATTCTTGATTCTGTTTCTATATCTCTA
                      ____________________________________________________________
consensus             AAGCTCTGCCGAAAGGACCCCAATTTCCTGGACATTCTTGATTCTGTTTCTATATCTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018H12+           CGCAATATCCA                                                 
JMSF008D02+           CGCAATATCCATGAGAATTCTCTGCCATTTAGACAGAGATATATATGTAATTATGTATAT
                      ____________________________________________________________
consensus             CGCAATATCCATGAGAATTCTCTGCCATTTAGACAGAGATATATATGTAATTATGTATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008D02+           GTGGAGCAGGCCGTGTCTGGAGTGGGTGCCTGGGGTGGGGTGGGGTGGAGAGGGGAGGGG
                      ____________________________________________________________
consensus             GTGGAGCAGGCCGTGTCTGGAGTGGGTGCCTGGGGTGGGGTGGGGTGGAGAGGGGAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008D02+           TGGGGGTTTGGGTGCGATGCTTGAGTACTACTTAGAGTCAGAAAGAAGCGTTTGGTGGGA
                      ____________________________________________________________
consensus             TGGGGGTTTGGGTGCGATGCTTGAGTACTACTTAGAGTCAGAAAGAAGCGTTTGGTGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008D02+           TTCTGGAGAAAAAACGGTCAGTATTGTAGATTGCGGGAAAGAAGAAAGTATCCGACGCCC
                      ____________________________________________________________
consensus             TTCTGGAGAAAAAACGGTCAGTATTGTAGATTGCGGGAAAGAAGAAAGTATCCGACGCCC